Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmodium_20berghei_20[genbank_20GCA_5F000005395.1_202004-12-09] 7,479 sequences; 17,954,629 total letters Query= NC_018504.1 Length=123876 Score E Sequences producing significant alignments: (Bits) Value seq4931 113 4e-20 >seq4931 Length=1290 Score = 113 bits (124), Expect = 4e-20 Identities = 97/120 (81%), Gaps = 0/120 (0%) Strand=Plus/Minus Query 101350 TTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTC 101409 ||| || || ||||| |||| |||||||||||||||| ||| ||| |||| | ||| || Sbjct 1252 TTGGTCAGGGGGAATTCCTTTTTTATCTTGAATTTTTGCTTTAACATTTTCAATAGTATC 1193 Query 101410 AGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469 || | ||| || |||||||||| ||||| |||||||| ||||||||||| || ||||| Sbjct 1192 GGATGGTTCAACATCAAGAGTGATTGTTTTTCCGGTTAATGTTTTTACAAAGATTTGCAT 1133 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 396242279100003