Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmodium_20berghei_20[genbank_20GCA_5F000005395.1_202004-12-09] 7,479 sequences; 17,954,629 total letters Query= NC_020864.1 Length=205622 Score E Sequences producing significant alignments: (Bits) Value seq3938 533 2e-146 seq2202 318 8e-82 seq2267 203 4e-47 seq7238 134 2e-26 seq7405 118 1e-21 seq4931 107 3e-18 >seq3938 Length=9879 Score = 533 bits (590), Expect = 2e-146 Identities = 1106/1632 (68%), Gaps = 17/1632 (1%) Strand=Plus/Plus Query 195298 AGCTATTGGTATCGATTTAGGAACTACTTACTCATGTGTTGGTGTATGGCAAAATGATCG 195357 |||||| ||||| ||||| || || || || || ||||||||||||||| |||||| Sbjct 2661 AGCTATAGGTATTGATTTGGGTACCACATATTCCTGTGTTGGTGTATGGAGAAATGAAAA 2720 Query 195358 TGTAGAGATTATCCCGAATGACCAAGGAAACCGTACAACTCCATCGTACGTTGCCTTTAC 195417 ||| || || || | || |||||||| || | ||||| ||||| || || || ||||| Sbjct 2721 TGTCGATATAATTGCAAACGACCAAGGTAATAGAACAACCCCATCCTATGTAGCTTTTAC 2780 Query 195418 AGATAATGAACGTCTCGTTGGAGATGCCGCAAAAAATCAGACAGCTATGAACCCTATCAA 195477 || | ||| | | |||||||||| || |||||||| || | ||| || || Sbjct 2781 CGACACAGAAAGATTAATTGGAGATGCAGCTAAAAATCAAGTTGCAAGGAATCCAGAAAA 2840 Query 195478 TACTGTCTTTGACGCGAAGCGTCTTATTGGTCGCAAGTTTTCGGATAAGAAAGTCCAAGA 195537 ||| || ||||| || || | | ||||| | |||||| | || || ||| Sbjct 2841 TACAGTATTTGATGCAAAAAGATTAATTGGAAGGAAGTTTACAGAATCTTCTGTACAAAG 2900 Query 195538 CGATATAAAGGACTGGTCTTATGAAGTTGTTCCCGGTGTGGCTGATAAGCCTATGATTAA 195597 ||||| || | ||| | | | ||| | ||| | | || ||||| |||||| | Sbjct 2901 TGATATGAAACATTGGCCATTTACAGTAAAATCAGGTATTGAAGAAAAGCCAATGATTGA 2960 Query 195598 TGTTGAATTTCACGGTGAGAAGAAACAATTTGCTCCCGAAGAAATTTCGTCTATGGTGTT 195657 |||| | ||| || || |||||| |||| ||| |||||||| || |||||||| || Sbjct 2961 AGTTGTTTATCAAGGCGAAAAGAAATTATTTCATCCTGAAGAAATATCTTCTATGGTTTT 3020 Query 195658 GATTAAGATGAAGGAGACTGCGGAATCTTTCATGGGTAAAACTGTGAAAGATGCAGTTGT 195717 || ||||| || | ||| ||| | || | || ||| || | ||| |||| ||| | Sbjct 3021 ACAAAAAATGAAAGAAAATGCAGAAGCCTTTTTAGGAAAATCTATAAAAAATGCTGTTAT 3080 Query 195718 GACTGTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCTGCTGCTAT 195777 || |||||||| || || | |||||| ||| | || || ||||| || |||| | | || Sbjct 3081 TACAGTACCTGCATATTTTAATGATTCTCAAAGGCAAGCAACAAAAGATGCTGGTACAAT 3140 Query 195778 TGCGGGTCTAAACTGTCTTAGAATTATCAATGAACCAACAGCGGCTGCAATTGCTTATGG 195837 ||| || |||| | | |||||||| ||||||||||| || || || ||||| ||||| Sbjct 3141 TGCAGGGTTAAATGTTATGAGAATTATAAATGAACCAACTGCAGCAGCTATTGCATATGG 3200 Query 195838 TCTGGACAAGAACAAGG--ACGAAGATAAAAATGTATTGATCTTTGATCTCGGTGGTGGT 195895 | | ||| || |||| | | ||| |||||| | || || || ||| | || |||||| Sbjct 3201 TTT--ACATAAAAAAGGAAAAGGAGAAAAAAATATTTTAATTTTCGATTTAGGAGGTGGT 3258 Query 195896 ACGTTTGATGTCTCACTTCTCAATATTGAAGGTGGTATATTCGAAGTAAAGGCTACTGCT 195955 || |||||||| ||| | || | |||||||| |||||| || ||||| ||||| || || Sbjct 3259 ACATTTGATGTTTCATTACTTACTATTGAAGATGGTATTTTTGAAGTTAAGGCAACAGCA 3318 Query 195956 GGTGATACTCATCTAGGTGGTGAAGATTTCGATGCACGTCTTCTCCGTCATTTGT-CTGA 196014 |||||||| ||| |||||||||||||||| ||| ||| | | | ||||| ||| Sbjct 3319 GGTGATACCCATTTAGGTGGTGAAGATTTTGATAATCGTTTAGTAAAT-TTTTGTGTTGA 3377 Query 196015 TGAGTTCCGTCGAAAGAATA-AG--AAAGATATTTCTGGAAATCCTAGGGCTCTTCGTCG 196071 || || |||| |||| || |||||| | || |||| ||| || | | | Sbjct 3378 AGATTTTAAAAGAAAAAATAGAGGAAAAGATTTATCAAAAAATAGTAGAGCATTAAGAAG 3437 Query 196072 GCTTAGGACTGCATGTGAACGTGCCAAACGAACTCTCTCTTCTACGGCTCAAACAATGGT 196131 | || || ||| ||| | || ||||| || | |||||| | | ||| | | | Sbjct 3438 ATTAAGAACACAATGCGAAAGAGCAAAACGTACATTATCTTCTTCTACACAAGCTACCAT 3497 Query 196132 TGAGATTGATTCGTTGTTTGACGGAATTGACTTCTA-TACAACTATTACCCGTGCACGTT 196190 ||| ||||| || | ||||| || ||||| || || | ||| | | | || | | Sbjct 3498 TGAAATTGACTCCCTTTTTGAAGGTATTGA-TTATAGTGTTACTGTAAGTAGAGCTAGAT 3556 Query 196191 TTGAAGAGTTAAACTCTGATTTGTTTAGGAAGTGTATGGAACCTGTTGAACAAGTACTTC 196250 ||||||| ||| ||||| ||||| | | | |||||||||| |||| | Sbjct 3557 TTGAAGAATTATGTATTGATTATTTTAGAGACACTTTAATACCTGTTGAAAAAGTTTTAA 3616 Query 196251 GTGACGCAAAGATGGATAAGTCTAAGGTTGATGAAATTGTCCTTGTGGGAGGATCAACCC 196310 || || | ||||||||| | ||| ||||| |||| | || || || ||||| Sbjct 3617 AAGATGCTATGATGGATAAAAAGAGTGTTCATGAAGTTGTATTAGTTGGTGGTTCAACAA 3676 Query 196311 GTATTCCGAAGATTCAACAGATGCTTTCTAG-CTTCTTCAATAATAAAGATTTAAACAAA 196369 | ||||| || || ||| | || | || ||||| ||| ||||| | | | Sbjct 3677 GAATTCCAAAAATCCAA-ACATTAATAAAAGAATTCTTTAATGGAAAAGAAGCATGTAGA 3735 Query 196370 ACGATCAACCCGGATGAAGCAGTTGCTTATGGTGCGGCCGTTCAGGCTGCTATTCTCTCA 196429 | || || || |||||||| ||||| |||||||| || ||||| |||||||| | || Sbjct 3736 TCAATAAATCCTGATGAAGCTGTTGCATATGGTGCTGCTGTTCAAGCTGCTATATTATCT 3795 Query 196430 GGTGTTGACAAT--AATAACGTCCAAGATCTTCTGCTACTTGATGTTGCACCCGTATCCC 196487 || | | |||| ||| || |||||| | | || | ||||| || | || Sbjct 3796 GGAGAT--CAATCAAATGCAGTACAAGATTTATTATTATTAGATGTATGTTCCTTGTCTT 3853 Query 196488 TGGGTCTTGAAACAGCGGGTGGTGTTATGACTAAAATTATTGATAGGAACACAACTATTC 196547 | || | ||||| || |||||||||||||||||| | ||||| || || ||||| || | Sbjct 3854 TAGGATTAGAAACTGCAGGTGGTGTTATGACTAAATTAATTGAAAGAAATACAACAATCC 3913 Query 196548 CGACTAAGAAGGAACAAGTCTTTTCAACGTATTCCGATAATCAACCAGGTGTTCATATTC 196607 | |||| || ||| | ||| |||| ||| | ||||| ||||||||||| || | Sbjct 3914 CAGCTAAAAAAAGCCAAATATTTACAACATATGCTGATAACCAACCAGGTGTATTAATAC 3973 Query 196608 AAGTATATGAAGGAGAACGCTCCCGTGCAAAGGATAACCATCTACTTGGAACTTTCGATT 196667 ||||||||||||| ||| | | |||| ||||| || || | |||| || ||| Sbjct 3974 AAGTATATGAAGGGGAAAGAGCTTTAACAAAAGATAATAATTTATTAGGAAAATTTCATT 4033 Query 196668 TGACGGGGATTCCAGCTGCACCCAGAGGTGTTCCACAGATTAATGTTTGCTTCGATATAG 196727 | || |||||| |||| || ||| || ||||| ||| | ||| || ||||| | Sbjct 4034 TAGATGGAATTCCACCTGCTCCTAGAAAAGTACCACAAATTGAAGTTACTTTTGATATTG 4093 Query 196728 ACGCAAATGGAATTCTAAACGTCACAGCTGAGGACAAGGCTTCTGGCAAATCTGAAAAGA 196787 | |||||||| ||| |||| |||||||||| || || | |||| ||| | | | Sbjct 4094 ATGCAAATGGTATTTTAAATGTCACAGCTGTTGAAAAAAGTACTGGTAAACAAAATCATA 4153 Query 196788 TTGTGATTACCAATGACAAGGGGCGGCTTTCTAAGGAGGAAATTGAACGTATGGTTCAAG 196847 || ||||| ||||| || || | | || || |||||||| | |||||| | | Sbjct 4154 TTACAATTACTAATGATAAAGGTAGATTATCCCCTGAAGAAATTGATAGAATGGTTAATG 4213 Query 196848 ATGCGGAAAAGTACAGGGAAGAAGACGAGGTATATGAGAAACAGATGAAAGCTATAAATG 196907 |||| ||||| || | | |||||| || | | | | ||| || |||| | |||| Sbjct 4214 ATGCTGAAAAATATAAAGCAGAAGATGAAGAAAACAAAAAAAGAATTGAAGCCAGAAATA 4273 Query 196908 ATCTAGAAAATT 196919 || ||||||| Sbjct 4274 GCCTTGAAAATT 4285 >seq2202 Length=5960 Score = 318 bits (352), Expect = 8e-82 Identities = 1066/1638 (65%), Gaps = 51/1638 (3%) Strand=Plus/Plus Query 195301 TATTGGTATCGATTTAGGAACTACTTACTCATGTGTTGGTGTATGGCAAAATGATCGTGT 195360 |||||||||||||||||| |||||||| ||||||||||||| |||||| | || Sbjct 680 TATTGGTATCGATTTAGGTACTACTTATAGTTGTGTTGGTGTATTTAAAAATGGAAGAGT 739 Query 195361 AGAGATTATCCCGAATGACCAAGGAAACCGTACAACTCCATCGTACGTTGCCTTTACAGA 195420 || || | ||||| ||| || |||| || ||||| || ||| | ||| || Sbjct 740 TGAAATATTAAACAATGATTTAGGTAATCGTATTACACCATCATATGTTTCATTTGTTGA 799 Query 195421 TAATGAACGTCTCGTTGGAGATGCCGCAAAAAATCAGACAGCTA---TGAACCCTA-TCA 195476 | ||| | ||||| || || || ||| | ||| ||||| | | || | ||| Sbjct 800 TGGAGAAAGAAAAGTTGGTGAAGCAGCTAAA--TTAGA-AGCTACTTTACATCCAACTCA 856 Query 195477 ATACTGTCTTTGACGCGAAGCGTCTTATTGGTCGCAAGTTTTCGGATAAGAAAGTCCAAG 195536 | ||||| ||||| | || | ||||||||| | || ||| || || |||| | Sbjct 857 A-ACTGTATTTGATGTTAAAAGACTTATTGGTAGGAAATTTGATGACAAAGAAGTAGCAA 915 Query 195537 ACGATATAAAGGACTGGTCTTATGAAGTTGTTCCCGGTGTGGCTGATAAGCCTATGATTA 195596 | |||| || | | |||||| | || | || | | || || | || | Sbjct 916 AAGATAGAACTTTATTACCATATGAAATAGTAAACAATGAAGGT---AAACCAAATATAA 972 Query 195597 ATGTTGAATTTCACGGTGAGAAGAAACAA-----TTTGCTCCCGAAGAAATTTCGTCTAT 195651 ||| || | | ||| || | | ||||| || || ||||| |||| Sbjct 973 GAGTTCAAATAAA-----AGACAAACCCACTACTTTTGCACCTGAGCAAATTAGTGCTAT 1027 Query 195652 GGTGTTGATTAAGATGAAGGAGACTGCGGAATCTTTCATGGGTAAAACTGTGAAAGATGC 195711 ||| || || ||||| || | ||| |||| || |||||||| | || ||| |||| Sbjct 1028 GGTTTTAGAAAAAATGAAAGAAATTGCTCAATCATTTTTGGGTAAACCAGTAAAAAATGC 1087 Query 195712 AGTTGTGACTGTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCTGC 195771 ||||| |||||||||||||| || | |||| ||||| |||| || ||||| || |||| Sbjct 1088 TGTTGTTACTGTACCTGCTTATTTTAATGATGCACAAAGACAAGCTACAAAAGATGCTGG 1147 Query 195772 TGCTATTGCGGGTCTAAACTGTCTTA-GAATTATCAATGAACCAACAGCGGCTGCAATTG 195830 ||| ||||| ||| |||| | | || | ||||| |||||||| || || ||||| | | Sbjct 1148 TGCAATTGCTGGTTTAAA-TATAGTACGTATTATTAATGAACCCACCGCTGCTGCTTTAG 1206 Query 195831 CTTATGGTCTGGACAAGAACAAGGACGAAGATAAAAATGTATTGATCTTTGATCTCGGTG 195890 |||||||| | || || || ||||| | || | |||| | | |||| | || | Sbjct 1207 CTTATGGTTTAGATAAAAAA------GAAGAAACAAGTATATTAGTATATGATTTGGGAG 1260 Query 195891 GTGGTACGTTTGATGTCTCACTTCTCAATATTGAAGGTGGTATATTCGAAGTAAAGGCTA 195950 ||||||| |||||||| || || | ||| || |||| |||| |||||| | || | Sbjct 1261 GTGGTACATTTGATGTTTCTATTTTAGTTATAGATAATGGTGTATTTGAAGTATATGCAA 1320 Query 195951 CTGCTGGTGATACTCATCTAGGTGGTGAAGATTTCGATGCACGTCTTCTCCGTCATTTGT 196010 | || || |||||||| |||| ||||||||||| ||| | | || | | |||| | Sbjct 1321 CAGCAGGAAATACTCATTTAGGAGGTGAAGATTTTGATCAAAGAGTTATGGATTATTT-T 1379 Query 196011 CTGATGA-GTTCCGTCGAAAGAATAAGAAAGATATTTCTGGAAATCCTAGGGCTCTTCGT 196069 | | | ||| ||| ||||| | |||| || | || || ||| ||| Sbjct 1380 ATAAAAATGTTTAAAAAAAAAAATAATATAGATCTTAGATCAGATAAAAGAGCTATTCAA 1439 Query 196070 CGGCTTAGGACTGCATGTGAACGTGCCAAACGAACTCTCTC--TTCTACGGCTCAA-ACA 196126 | || | | | |||| ||| ||| ||| | || || | | |||| ||| Sbjct 1440 AAATTAAGAAAAGAAGTTGAAATTGCAAAAAGAAACTTATCAGTTGTTCA--TCAACACA 1497 Query 196127 ATGGTTGAGATTGATTCGTTGTTTGACGGAATTGACTTCTATACAACTATTACCCGTGCA 196186 | |||| ||||| | |||| ||| | | || | ||| | || | || Sbjct 1498 AA--TTGAAATTGAAGATATAATTGAAGGACATAATTTTTCAGAAACATTAACAAGAGCC 1555 Query 196187 CGTTTTGAAGAGTTAAACTCTGATTTGTTTAGGAAGTGTATGGAACCTGTTGAACAAGTA 196246 |||||||| ||||| |||||| ||||| | | | ||||||||| || ||||| Sbjct 1556 AAATTTGAAGAATTAAATGATGATTTATTTAGAGAAACTTTAGAACCTGTTAAAAAAGTA 1615 Query 196247 CTTCGTGACGCAAAG-ATGGATAAGTCTAAGGTTGATGAAATTGTCCTTGTGGGAGGATC 196305 | ||| ||||| ||| | || | || ||||||||||||| | || ||||| || Sbjct 1616 TTAGATGATGCAAAATATGAAAAAAGCAAAA-TTGATGAAATTGTTTTAGTAGGAGGTTC 1674 Query 196306 AACCCGTATTCCGAAGATTCAACAGATGCTTTCTAGCTTCTTCAATAATAAAGATTTAAA 196365 ||| ||||| || || || ||||| || || ||| |||||| |||||| || Sbjct 1675 AACTCGTATACCTAAAATCCAACAAATTATTAAAGACTTTTTCAATGGTAAAGAACCCAA 1734 Query 196366 CAAAACGATCAACCCGGATGAAGCAGTTGCTTATGGTGCGGCCGTTCAGGCTGCTATTCT 196425 | | || || || ||||||||||| || |||||||| || |||| || | ||| | Sbjct 1735 TAGAGGTATTAATCCAGATGAAGCAGTAGCATATGGTGCCGCTATTCAAGCAGGTATCAT 1794 Query 196426 CTCAGGTGTTGACAATAATAACGTCCAAGATCTTCTGCTACTTGATGTTGCACCCGTATC 196485 | ||| | || ||| || ||||| || | || | |||||| | || || | Sbjct 1795 TTTAGGAG-----AAGAATTAC----AAGATGTTGTATTATTAGATGTTACTCCATTAAC 1845 Query 196486 CCTGGGTCTTGAAACAGCGGGTGGTGTTATGACTAAAATTATTGATAGGAACACAACTAT 196545 | ||| ||||||| | || ||| |||||||| || | ||| | || || ||| ||| Sbjct 1846 TTTAGGTATTGAAACTGTTGGAGGTATTATGACTCAATTAATTAAAAGAAATACAGTTAT 1905 Query 196546 TCCGACTAAGAAGGAACAAGTCTTTTCAACGTATTCCGATAATCAACCAGGTGTTCATAT 196605 || || || || |||| |||||||| ||| ||||||||||||| |||| || Sbjct 1906 CCCAACAAAAAAATCACAAACATTTTCAACATATCAAGATAATCAACCAGCTGTTTTAAT 1965 Query 196606 TCAAGTATATGAAGGAGAACGCTCCCGTGCAAAGGATAACCATCTACTTGGAACTTTCGA 196665 |||||| | |||||||||| | | | || ||||| ||| || | |||| || || Sbjct 1966 TCAAGTTTTTGAAGGAGAAAGAGCATTAACTAAAGATAATCATTTATTAGGAAAATTTGA 2025 Query 196666 TTTGACGGGGATTCCAGCTGCACCCAGAGGTGTTCCACAGATTAATGTTTGCTTCGATAT 196725 || | || || ||| | |||| |||||||| || | ||| | ||| || | | Sbjct 2026 ATTATCAGGAATACCACCAGCACAAAGAGGTGTACCTAAAATTGAAGTTACATTTACTGT 2085 Query 196726 AGACGCAAATGGAATTCTAAACGTCACAGCTGAGGACAAGGCTTCTGGCAAATCTGAAAA 196785 || |||||| ||| || | || ||| || || || | |||| ||| | || Sbjct 2086 CGATAAAAATGGTATTTTACATGTAGAAGCAGAAGATAAAGGAACTGGAAAAAGTAAAGG 2145 Query 196786 GATTGTGATTACCAATGACAAGGGGCGGCTTTCTAAGGAGGAAATTGAACGTATGGTTCA 196845 || ||||| |||||||| || | | || || || |||| ||| ||| || | Sbjct 2146 TATAACTATTACTAATGACAAAGGTAGATTATCAAAAGAACAAATAGAAAAAATGATTAA 2205 Query 196846 AGATGCGGAAAAGTACAGGGAAGAAGA-CGAGGTATATGAGAAACAGATGAAAGCTATAA 196904 ||||| ||||| | || ||||| | | || |||||| || || || | | || Sbjct 2206 TGATGCTGAAAAATTTGCTGATGAAGATAAAAATTTAAGAGAAAAAGTTG-AATCAAAAA 2264 Query 196905 ATGATCTAGAAAATTCTA 196922 || || |||| |||| || Sbjct 2265 ATAATTTAGATAATTATA 2282 >seq2267 Length=4651 Score = 203 bits (224), Expect = 4e-47 Identities = 1036/1626 (64%), Gaps = 42/1626 (3%) Strand=Plus/Minus Query 77951 CCTCAATACTTATTCATGCGTGTTTCTATTGGTATTCATGGAAATGATATTCCAGCGGTA 78010 |||||| | ||||| ||| | || || ||||| |||||| | ||||| || | | Sbjct 3625 CCTCAACATTTATTAATGAGAGTGTCAATTGGAATTCATATAGATGATCTTGAAAAAGCT 3566 Query 78011 CTTGAAACGTATGATAAAATGTC-CAATGGTATGTTTATTCACGCAACACCTACTTTGTT 78069 | ||||| ||| || |||||| ||| ||| || | || || ||||| || || || Sbjct 3565 TTAGAAACATATCATTTAATGTCTCAAAAATAT-TTCACACATGCTACACCCACATTATT 3507 Query 78070 TAATGCAGGTACTCCCCGTCCACAGATGTCATCTTGTTTCCTACTTGCAAATAAGGAGGA 78129 |||| |||| || || || || || |||||||||||||| ||| | | | || || Sbjct 3506 TAATTCAGGAACCCCACGACCGCAAATGTCATCTTGTTTTCTATTATCTATGAAATCAGA 3447 Query 78130 CTCTATTAATGGTATATACGGGACTCTCACAGAGTGTGCTCAGATTTCTAAGTGGGCTGG 78189 |||||| | ||||||| | || | | | | |||||| |||| ||| || || Sbjct 3446 TTCTATTGAAGGTATATTTGAAACATTAAAACAATGTGCTTTGATTAGTAAAACAGCAGG 3387 Query 78190 TGGTATAGGTCTTCATATTCACGATGTTCGTGCAAACAAGTCCAGGATTAGAGGAACTAA 78249 || ||||| || | | || ||| | | | | || || |||||||||||||| Sbjct 3386 CGGCATAGGAGTTGCTGTACAAGATATAAGAGGTCAGAATTCTTATATTAGAGGAACTAA 3327 Query 78250 TGGTCAGTCTGATGGAATTATTCCTATGCTTAGGGTATTCAATGCTACAGCACGCTATGT 78309 |||| || |||| | |||| ||| | ||||| || |||| ||| ||| | ||||| Sbjct 3326 TGGTATATCAAATGGTTTAGTTCCAATGTTAAGGGTTTTTAATGATACGGCAAGGTATGT 3267 Query 78310 CAACCAAGCGGGTCG---TAGGAAGGGGTCATTCGCTATGTACCTTGAACCTTGGCACGC 78366 | |||| || | || || || || || || | || | || || ||||| | Sbjct 3266 AGATCAAGGTGGAGGGAAAAGAAAAGGATCTTTTGCAGTATATATAGAGCCATGGCATTC 3207 Query 78367 CGATGTAATGGATTTTTTGGAACTTCGTCTCAACCAGGGTGACGAGGAAGCTCGATGCAG 78426 ||| | | || ||||| || | | || || ||| | || ||| || | Sbjct 3206 AGATATTTTTGAATTTTTAGATTTAAGAAAAAATCATGGTAAAGAAGAATTAAGAGCTCG 3147 Query 78427 GGATTTATTCACTGCTATGTGGATTCCGGATCTTTTTATGAAGAGAGTTGAGGAAGGAGG 78486 |||||||| |||||| ||| | || ||| | |||||||| ||||| | ||| Sbjct 3146 AGATTTATTTTATGCTATTTGGGTACCTGATTTATTTATGAAAAGAGTAAAAGAAAATAA 3087 Query 78487 TAAATGGTCTCTTTTCTGTCCAGATAAGACTAAGGGTCTTTCAG---ATGTATACGGGGA 78543 || ||| || | | ||||| || | | || ||| || || | | || || Sbjct 3086 AAACTGGACTTTAATGTGTCCTAATGAATGTCCAGG--TTTAAGTGAATCT-TGGGGAGA 3030 Query 78544 AGAATTCGAAAAATTGTACACTAAATACGAAGAGGAAGGTCTCGCTATTAAGACAATTGA 78603 ||||| ||||| || || || ||||| ||||| ||| | | | | || ||| | Sbjct 3029 CGAATTTGAAAAGTTATATACAAAATATGAAGAAGAAAATTTAGGAAAAAAAACAGTCCT 2970 Query 78604 TGCATCTGAACTATGGAAAGCTATTATCAAAAGTCAAACAGAGACCGGCACCCCGTATAT 78663 |||| || ||||| ||||| | ||||||||| || || || || ||||| Sbjct 2969 TGCACAAGATTTATGGTTTGCTATATTACAAAGTCAAATTGAAACTGGTGTACCATATAT 2910 Query 78664 GCTATACAAAGACAGCTGTAACAGAAAGTCTAACCAAAAGAACCTAGGTGTCATCAAAAG 78723 | |||| ||||| || || || ||||| ||||| || |||| || ||| | Sbjct 2909 GTTATATAAAGATGCATGCAATTCTAAATCTAATCAAAAAAATTTAGGAACAATTAAATG 2850 Query 78724 CTCTAACCTTTGCACAGAAATTCTGGAATACACGGATAAGAATGAAACAGCTGTATGTAA 78783 |||| | || ||||| | |||||||| ||||| |||||| ||||| Sbjct 2849 TAGTAACTTATGTTGTGAAATAATTGAATACACCTCACCTGATGAAGTAGCTGTTTGTAA 2790 Query 78784 TCTAGGGTCTATCGCTCTACCAAAGTTTGTTGATCGAGAATTAAAGACATTTGATTATTC 78843 | | | || || || || || ||||||||| ||||| ||| |||| ||| | Sbjct 2789 TTTGGCTTCAATTGCATTATGTAAATTTGTTGATAGAGAAAAAAAAGAATTTAATTTTAA 2730 Query 78844 AAAGCTCCACGAAATTACAAAAATCGTAACTAAAAATTTAAATCGTGTAATTGACCGTAA 78903 ||| | | || ||||| ||||| | |||| ||||||| || | ||||| | || Sbjct 2729 AAAATTATATGATATTACTAAAATTATTACTAGAAATTTAGATAAAATTATTGAAAGAAA 2670 Query 78904 CTACTACCCAGTCGAGACTGCTAAATATTCTAATATGAAACATAGACCAATTGGTCTAGG 78963 || |||||| | | ||| || | || |||| | ||| |||| ||||| |||| Sbjct 2669 TTATTACCCAATTAAAGAAGCTGAAAAATCAAATAAAAGGCATCGACCTATTGGAATAGG 2610 Query 78964 TGTTCAAGGATTGGCAGATGTATTCA-ACTTGTGTGGTCTTCCCTTCGATTGCGAAGATT 79022 || |||||||| |||||| ||| | ||| | | | ||| | || | || || Sbjct 2609 AGTACAAGGATTAGCAGATACATTTATGCTTTTAAGAT-ATCCATATGAATCTGACGAAG 2551 Query 79023 C-AAGGACT---ATGAATGCTCATATTTTCGAGACTATTTATCATGCAGCTTTAGAA--G 79076 | || || | || || | |||||| ||||| || ||| |||| ||||||||| | Sbjct 2550 CTAAAGAATTAAATAAAAG--AATATTT--GAGACAATGTATTATGCGGCTTTAGAAATG 2495 Query 79077 CAAGTTCAGAACTTGCTGAAATTAATGGGCCTTATGAGAGTTTCGAGGGTTCACCCGCTT 79136 ||| ||| | || || | |||| || ||||| | ||||| || || Sbjct 2494 TCTGTT--GAATTAGCACAAGTACATGGTCCATATGAATCATATAAGGGTAGTCCAGCAA 2437 Query 79137 CACAAGGTCTTCTTCAACCAGATCTATGGGAAGGTGAAGCTAAATACAGTGGTCGTTACG 79196 ||||| | | ||| ||| | | |||| | || || || | | || | Sbjct 2436 GCCAAGGAATATTACAATTTGATATGT-GGAATGCAAAAGTAGAT--AATAAATATTGGG 2380 Query 79197 ATTGGGATGCAATGAGAAAGCGTGTAATGACGAAGGGTCTGAGAAACAGTCTTCTCGTAG 79256 |||||||| | | | ||| ||| | | || | ||||| ||||| ||| Sbjct 2379 ATTGGGATTTATTAAAAAAAAAAATAAGCATACATGGATTAAGAAATTCACTTCTTTTAG 2320 Query 79257 CACCAATGCCCACTGCTTCGACGGCTCAGATCCTCGGTAATAATGAGTGTTTTGAACCAT 79316 |||| ||||| || ||||| || | || || | || |||||||| | ||||||||||| Sbjct 2319 CACCTATGCCAACAGCTTCAACTTCACAAATTTTGGGAAATAATGAATCTTTTGAACCAT 2260 Query 79317 ACACTACAAACATATATCTTCGTCGCACATTAGCTGGTGAATTTGTTGTGGTTAACAAAC 79376 | || | ||||| || | | || |||| ||||||||| |||| || || | Sbjct 2259 ATACAAGTAACATTTACTATAGACGTGTATTAAGTGGTGAATTCTTTGTTGTAAATCCTC 2200 Query 79377 ATCTTGTT-GAAGAT-TTGAAGA-AGTTAGGTCTTTGGTCAAAAGAGATGA---AAGACT 79430 || ||||| ||||| || || || |||| | ||| |||| |||| || | | Sbjct 2199 AT-TTGTTAAAAGATCTTTTTGATAG--AGGTTTGTGGGATGAAGATATGAAACAACAAT 2143 Query 79431 TAA-TGGTCAAAGCCGGAGGGAGTGTGCAAAACATAGTAGAGATACCAGATAATATTAAA 79489 ||| || ||| | || ||||| ||| | || || ||||| | | | ||| Sbjct 2142 TAATTGCTCA----CAATGGAAGTGTCCAATATATTAGCGAAATACCTAACGACTTGAAA 2087 Query 79490 AATCTTTATAAGACTGTTTGGGAAATTAGCCAAAAATGTATTATCGACATGGCAGCGGAC 79549 | | ||||| |||||||||||||| | ||||| |||||| |||||||| || ||| Sbjct 2086 GAATTGTATAAAACTGTTTGGGAAATCAAGCAAAAGAATATTATTGACATGGCCGCTGAC 2027 Query 79550 AGGGGT 79555 ||||| Sbjct 2026 CGGGGT 2021 >seq7238 Length=1513 Score = 134 bits (148), Expect = 2e-26 Identities = 271/403 (67%), Gaps = 0/403 (0%) Strand=Plus/Plus Query 195298 AGCTATTGGTATCGATTTAGGAACTACTTACTCATGTGTTGGTGTATGGCAAAATGATCG 195357 |||||| ||||| ||||| || || || || || ||||||||||||||| |||||| Sbjct 1109 AGCTATAGGTATTGATTTGGGTACCACATATTCCTGTGTTGGTGTATGGAGAAATGAAAA 1168 Query 195358 TGTAGAGATTATCCCGAATGACCAAGGAAACCGTACAACTCCATCGTACGTTGCCTTTAC 195417 ||| || || || | || |||||||| || | ||||| ||||| || || || ||||| Sbjct 1169 TGTCGATATAATTGCAAACGACCAAGGTAATAGAACAACCCCATCCTATGTAGCTTTTAC 1228 Query 195418 AGATAATGAACGTCTCGTTGGAGATGCCGCAAAAAATCAGACAGCTATGAACCCTATCAA 195477 || | ||| | | |||||||||| || |||||||| || | ||| || || Sbjct 1229 CGACACAGAAAGATTAATTGGAGATGCAGCTAAAAATCAAGTTGCAAGGAATCCAGAAAA 1288 Query 195478 TACTGTCTTTGACGCGAAGCGTCTTATTGGTCGCAAGTTTTCGGATAAGAAAGTCCAAGA 195537 ||| || ||||| || || | | ||||| | |||||| | || || ||| Sbjct 1289 TACAGTATTTGATGCAAAAAGATTAATTGGAAGGAAGTTTACAGAATCTTCTGTACAAAG 1348 Query 195538 CGATATAAAGGACTGGTCTTATGAAGTTGTTCCCGGTGTGGCTGATAAGCCTATGATTAA 195597 ||||| || | ||| | | | ||| | ||| | | || ||||| |||||| | Sbjct 1349 TGATATGAAACATTGGCCATTTACAGTAAAATCAGGTATTGAAGAAAAGCCAATGATTGA 1408 Query 195598 TGTTGAATTTCACGGTGAGAAGAAACAATTTGCTCCCGAAGAAATTTCGTCTATGGTGTT 195657 |||| | ||| || || |||||| |||| ||| ||| ||| || |||||||| | Sbjct 1409 AGTTGTTTATCAAGGCGAAAAGAAATTATTTCATCCTGAAAGAATATCTTCTATGGTTNT 1468 Query 195658 GATTAAGATGAAGGAGACTGCGGAATCTTTCATGGGTAAAACT 195700 || ||||| || | ||| ||| | || | || ||| || Sbjct 1469 ACAAAAAATGAAAGAAAATGCAGAAGCCTTTNTAGGAAAATCT 1511 >seq7405 Length=623 Score = 118 bits (130), Expect = 1e-21 Identities = 395/600 (66%), Gaps = 20/600 (3%) Strand=Plus/Minus Query 195767 GCTGCTGCTATTGCGGGTCTAAACTGTCTTA-GAATTATCAATGAACCAACAGCGGCTGC 195825 |||| ||| ||||| ||| |||| | | ||| | ||||| |||||||| || || ||||| Sbjct 621 GCTGGTGCAATTGCTGGTTTAAA-TATATTACGTATTATTAATGAACCCACCGCTGCTGC 563 Query 195826 AATTGCTTATGGTCTGGACAAGAACAAGGACGAAGATAAAAATGTATTGATCTTTGATCT 195885 | ||||||||| | || || || ||||| | || | |||| | | |||| | Sbjct 562 TTTAGCTTATGGTTTAGATAAAAAA------GAAGAAACAAGTATATTAGTATATGATTT 509 Query 195886 CGGTGGTGGTACGTTTGATGTCTCACTTCTCAATATTGAAGGTGGTATATTCGAAGTAAA 195945 || |||||||| |||||||| || || | ||| || |||| |||| |||||| | Sbjct 508 GGGAGGTGGTACATTTGATGTTTCTATTTTAGTTATAGATAATGGTGTATTTGAAGTATA 449 Query 195946 GGCTACTGCTGGTGATACTCATCTAGGTGGTGAAGATTTCGATGCACGTCTTCTCCGTCA 196005 || || || || |||||||| |||| ||||||||||| ||| | | || | | | Sbjct 448 TGCAACAGCAGGAAATACTCATTTAGGAGGTGAAGATTTTGATCAAAGAGTTATGGATTA 389 Query 196006 TTTGTCTGATGA-GTTCCGTCGAAAGAATAAGAAAGATATTTCTGGAAATCCTAGGGCTC 196064 ||| | | | | ||| ||| ||||| | |||| || | || || ||| Sbjct 388 TTT-TATAAAAATGTTTAAAAAAAAAAATAATATAGATCTTAGATCAGATAAAAGAGCTA 330 Query 196065 TTCGTCGGCTTAGGACTGCATGTGAACGTGCCAAACGAA--CTCTCTCTTCTACGGCTCA 196122 ||| | || | | | |||| ||| ||| ||| | || || | | ||| Sbjct 329 TTCAAAAATTAAGAAAAGAAGTTGAAATTGCAAAAAGAAACTTATCAGTTGTTC-ATTCA 271 Query 196123 A-ACAATGGTTGAGATTGATTCGTTGTTTGACGGAATTGACTTCTATACAACTATTACCC 196181 | |||| |||| ||||| | |||| ||| | | || | ||| | || Sbjct 270 ACACAA--ATTGAAATTGAAGATATAATTGAAGGACATAATTTTTCAGAAACATTAACAA 213 Query 196182 GTGCACGTTTTGAAGAGTTAAACTCTGATTTGTTTAGGAAGTGTATGGAACCTGTTGAAC 196241 | || |||||||| ||||| |||||| ||||| | | | ||||||||| || Sbjct 212 GAGCCAAATTTGAAGAATTAAATGATGATTTATTTAGAGAAACTTTAGAACCTGTTAAAA 153 Query 196242 AAGTACTTCGTGACGC-AAAGATGGATAAGTCTAAGGTTGATGAAATTGTCCTTGTGGGA 196300 ||||| | ||| || ||| ||| | || | || |||||||||||||| | || ||| Sbjct 152 AAGTATTAGATGATGCAAAATATGAAAAAAGC-AAAATTGATGAAATTGTCTTAGTAGGA 94 Query 196301 GGATCAACCCGTATTCCGAAGATTCAACAGATGCTTTCTAG-CTTCTTCAATAATAAAGA 196359 || ||||| |||||||| || || ||||| || ||| || ||| |||||| | |||| Sbjct 93 GGTTCAACTCGTATTCCTAAAATCCAACAAAT-TTTTAAAGACTTTTTCAATGGTGAAGA 35 >seq4931 Length=1290 Score = 107 bits (118), Expect = 3e-18 Identities = 120/158 (76%), Gaps = 2/158 (1%) Strand=Plus/Plus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 |||||||||||||| ||||| | || |||||||| ||||| || || ||||| | || Sbjct 1133 ATGCAAATCTTTGTAAAAACATTAACCGGAAAAACAATCACTCTTGATGTTGAACCATCC 1192 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATC-A 171980 || || || || || | ||||| || ||||||||||| |||| ||||| || || | | Sbjct 1193 GATACTATTGAAAATGTTAAAGCAAAAATTCAAGATAAAAAAGGAATTCCCCCTGACCAA 1252 Query 171981 GCAACGACTTA-TTTTTGCTGGTAAACAGCTTGAAGAT 172017 ||| ||| | |||||||||| ||||| | |||||| Sbjct 1253 ACAAAAACTAATTTTTTGCTGGAAAACAATTAGAAGAT 1290 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 657800898088880