Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmodium_20berghei_20[genbank_20GCA_5F000005395.1_202004-12-09] 7,479 sequences; 17,954,629 total letters Query= NC_021246.1 Length=281182 Score E Sequences producing significant alignments: (Bits) Value seq4931 149 1e-30 >seq4931 Length=1290 Score = 149 bits (164), Expect = 1e-30 Identities = 131/161 (81%), Gaps = 2/161 (1%) Strand=Plus/Minus Query 193205 ATCGTCTAATTGTTTTCCGGCAAAAA-TTAATCTCTGTT-GATCAGGAGGTATTCCTTCT 193262 ||| |||||||||||||| ||||||| ||| | | |||| | ||||| || ||||||| | Sbjct 1290 ATCTTCTAATTGTTTTCCAGCAAAAAATTAGTTTTTGTTTGGTCAGGGGGAATTCCTTTT 1231 Query 193263 TTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAACTTCTAGAGTT 193322 |||||||| ||||| | ||| | |||| |||||||||||| | ||||| || ||||| Sbjct 1230 TTATCTTGAATTTTTGCTTTAACATTTTCAATAGTATCGGATGGTTCAACATCAAGAGTG 1171 Query 193323 ATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCATTTT 193363 || ||||| || |||| ||||||||||| ||||||||||| Sbjct 1170 ATTGTTTTTCCGGTTAATGTTTTTACAAAGATTTGCATTTT 1130 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 899570293559280