Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmodium_20berghei_20[genbank_20GCA_5F000005395.1_202004-12-09] 7,479 sequences; 17,954,629 total letters Query= NC_023426.1 Length=245717 Score E Sequences producing significant alignments: (Bits) Value seq4931 136 6e-27 >seq4931 Length=1290 Score = 136 bits (150), Expect = 6e-27 Identities = 126/157 (80%), Gaps = 2/157 (1%) Strand=Plus/Plus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 ||||||| || ||||||||||||| ||||||||||| ||| ||||||| |||| || Sbjct 1134 TGCAAATCTTTGTAAAAACATTAACCGGAAAAACAATCACTCTTGATGTTGAACCATCCG 1193 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATC-AA 146150 |||||||| ||||||| ||| ||||| ||| |||| |||| ||||| || || | || Sbjct 1194 ATACTATTGAAAATGTTAAAGCAAAAATTCAAGATAAAAAAGGAATTCCCCCTGACCAAA 1253 Query 146151 CAAAGACTCA-TTTTTGCAGGTAAACAATTAGATGAT 146186 |||| ||| | ||||||| || ||||||||||| ||| Sbjct 1254 CAAAAACTAATTTTTTGCTGGAAAACAATTAGAAGAT 1290 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 786092903268680