Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmodium_20berghei_20[genbank_20GCA_5F000005395.1_202004-12-09] 7,479 sequences; 17,954,629 total letters Query= NC_024446.1 Length=306862 Score E Sequences producing significant alignments: (Bits) Value seq4931 134 3e-26 >seq4931 Length=1290 Score = 134 bits (148), Expect = 3e-26 Identities = 126/158 (80%), Gaps = 2/158 (1%) Strand=Plus/Minus Query 82656 TCTTCTAGTTGTTTTCCAGCAAAGA-TTAGTCTTTGTT-GATCTGGAGGTATTCCTTCCT 82713 ||||||| ||||||||||||||| | ||||| |||||| | || || || ||||||| | Sbjct 1289 TCTTCTAATTGTTTTCCAGCAAAAAATTAGTTTTTGTTTGGTCAGGGGGAATTCCTTTTT 1230 Query 82714 TATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTA 82773 |||||||||| |||||||| ||||||||||| ||||| ||||| || || | ||| | Sbjct 1229 TATCTTGAATTTTTGCTTTAACATTTTCAATAGTATCGGATGGTTCAACATCAAGAGTGA 1170 Query 82774 TCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCATT 82811 | || || || || || || |||||||| || |||||| Sbjct 1169 TTGTTTTTCCGGTTAATGTTTTTACAAAGATTTGCATT 1132 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 981733116715381