Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmodium_20berghei_20[genbank_20GCA_5F000005395.1_202004-12-09] 7,479 sequences; 17,954,629 total letters Query= NC_028112.1 Length=178262 Score E Sequences producing significant alignments: (Bits) Value seq4931 98.7 1e-15 >seq4931 Length=1290 Score = 98.7 bits (108), Expect = 1e-15 Identities = 123/166 (74%), Gaps = 2/166 (1%) Strand=Plus/Plus Query 27398 TTACTATAATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTG 27457 |||| | ||||||||||||||| || || | ||||| || || || |||||||| |||| Sbjct 1125 TTACGAAAATGCAAATCTTTGTAAAAACATTAACCGGAAAAACAATCACTCTTGATGTTG 1184 Query 27458 AGTCAGGTGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTC 27517 | || |||| |||| |||| | || || |||||||| || || | |||||||| | Sbjct 1185 AACCATCCGATACTATTGAAAATGTTAAAGCAAAAATTCAAGATAAAAAAGGAATTCCCC 1244 Query 27518 CAGACC-AGCAGCGTCTAA-TTTTTGCTGGTAAGCAACTCGAGGAT 27561 | |||| | || |||| |||||||||| || ||| | || ||| Sbjct 1245 CTGACCAAACAAAAACTAATTTTTTGCTGGAAAACAATTAGAAGAT 1290 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 570257083106480