Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmodium_20berghei_20[genbank_20GCA_5F000005395.1_202004-12-09] 7,479 sequences; 17,954,629 total letters Query= NC_030230.1 Length=372707 Score E Sequences producing significant alignments: (Bits) Value seq6922 84.2 5e-11 seq2006 84.2 5e-11 >seq6922 Length=680 Score = 84.2 bits (92), Expect = 5e-11 Identities = 73/91 (80%), Gaps = 0/91 (0%) Strand=Plus/Minus Query 4471 AATATTTGACCATCAGTAATAGAGATAACATTTGTAGGGATATAAGCAGAAACATCACCT 4530 |||||||| ||||||||||| || |||||||| ||||| ||||| ||||| |||||| Sbjct 430 AATATTTGTCCATCAGTAATTGAAATAACATTAGTAGGAATATATGCAGATACATCATTA 371 Query 4531 GCTTGTGTTTCGACAACAGGTAAGGCTGTTA 4561 | |||||| | |||||| || ||||||| Sbjct 370 TTTAATGTTTCAATAACAGGCAATGCTGTTA 340 >seq2006 Length=6500 Score = 84.2 bits (92), Expect = 5e-11 Identities = 73/91 (80%), Gaps = 0/91 (0%) Strand=Plus/Minus Query 4471 AATATTTGACCATCAGTAATAGAGATAACATTTGTAGGGATATAAGCAGAAACATCACCT 4530 |||||||| ||||||||||| || |||||||| ||||| ||||| ||||| |||||| Sbjct 5782 AATATTTGTCCATCAGTAATTGAAATAACATTAGTAGGAATATATGCAGATACATCATTA 5723 Query 4531 GCTTGTGTTTCGACAACAGGTAAGGCTGTTA 4561 | |||||| | |||||| || ||||||| Sbjct 5722 TTTAATGTTTCAATAACAGGCAATGCTGTTA 5692 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1192416926070426