Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmodium_20berghei_20[genbank_20GCA_5F900044335.1_202016-02-18] 478 sequences; 18,811,223 total letters Query= NC_014765.1 Length=198519 Score E Sequences producing significant alignments: (Bits) Value seq12 416 4e-111 seq13 228 1e-54 seq2 179 5e-40 seq11 150 2e-31 seq14 118 1e-21 seq5 91.5 2e-13 seq6 87.8 2e-12 >seq12 Length=816096 Score = 416 bits (460), Expect = 4e-111 Identities = 1094/1653 (66%), Gaps = 40/1653 (2%) Strand=Plus/Plus Query 6517 ATAACAGTAGTTTTCGAGACCATTCTTCGCCTCGACCTTTTTCGCGTACTTTTCATCTTC 6576 ||| || || ||||| || | ||| | || || | |||| || | ||||||||| Sbjct 416562 ATAGCAATAATTTTCAAGGCTATTTCTGGCTTCAATTCTTTTTTTGTTTTCTTCATCTTC 416621 Query 6577 ATCTTTATACTTTTCCGCATCTTGGACCATCTTTTCAATGTCTTCTTTCGATAATCTCCC 6636 ||||||| ||||| ||||| | ||||| | ||||| ||||| |||||||| || Sbjct 416622 TGCTTTATATTTTTCAGCATCATTAACCATTCTATCAATTTCTTCAGGGGATAATCTACC 416681 Query 6637 CTTATCATTCGTAATCGTAATCT--TTTCGGATTTACCCGAGGCCTTATCTTCAGCACTT 6694 |||||||| ||||| ||||| | ||| | |||||| | || || |||| | Sbjct 416682 TTTATCATTAGTAATTGTAATATGATTTTG--TTTACCAGTACTTTTTTCAACAGCTGTG 416739 Query 6695 ACATTCAAAATACCATTTGCATCAACATCGAACCTTACATTAATTTGTGGTGTACCCCTC 6754 ||||| ||||||||||||||||||| ||| || | || | |||||||||| || Sbjct 416740 ACATTTAAAATACCATTTGCATCAATATCAAAAGTAACTTCAATTTGTGGTACTTTTCTA 416799 Query 6755 GGTGCGGCTGGAATACCCGTTAAATCAAATGTACCAAGTAAACTGTTATCCGTCGCCTT- 6813 || || | |||||| || ||||| |||| | || | |||| | ||||| | | || Sbjct 416800 GGAGCAGGTGGAATTCCATCTAAATGAAATTTTCCTAATAAATTATTATCTTTTG--TTA 416857 Query 6814 ---CTTACGTTCACCTTCATAGACTTTAATTGTCACCGCAGGTTGATTATCTTGTGCCGT 6870 || | ||| |||||||| |||| ||| || | ||||| ||||| || Sbjct 416858 AAGCT--CTTTCCCCTTCATATACTTGTATTAATACACCTGGTTGGTTATCAGCATATGT 416915 Query 6871 TGAGAAGATTTGTTCTTTCTTAGATGGAATCGTCGTATTTCTCGGAATAACCGGGGTCAT 6930 || || ||||| ||| |||| ||| || || |||||||| ||| | ||||| Sbjct 416916 TGTAAATATTTGGCTTTTTTTAGCTGGGATTGTTGTATTTCTTTCAATTAATTTAGTCAT 416975 Query 6931 AATACCACCCATAGTTTCGAGTCCAAGAGACAGAGGTGTCACGTCCAAGAGTAACAGGTC 6990 || |||||| |||||| | ||| | ||||| | || || || | ||| | || Sbjct 416976 AACACCACCTGCAGTTTCTAATCCTAAAGACAAGGAACATACATCTAATAATAATAAATC 417035 Query 6991 TTGAACAG-ATTCGTTCCCTTCACCCGTTAAGATGGCGGCTTGGACCGTCGCCCCGTATG 7049 ||| || | ||| | | | | || | ||| || || ||||| || | || || |||| Sbjct 417036 TTGTACTGCATTTGATTGAT-CTCCAGATAATATAGCAGCTTGAACAGCAGCACCATATG 417094 Query 7050 CGACCGCCTCATCGGGGTTAATCGTTTTATTCAGTTCTTTACCGTTAAAATAATCCGATA 7109 | || || ||||| || || || | | || |||||| || ||||| | || || Sbjct 417095 CAACAGCTTCATCAGGATTTATTGATCTACATGCTTCTTTTCCATTAAAGAATTCTTTTA 417154 Query 7110 ACATTTGTTGAATTTTCGGGATTCGTGTCGATCCACCGACCAAAACGATTTCATTCACTT 7169 | | ||| ||||| || |||| ||| || ||||| || || || | ||||| || Sbjct 417155 TTAATGTTTGGATTTTTGGAATTCTTGTTGAACCACCAACTAATACAACTTCATGAACAC 417214 Query 7170 TCGATTTATCGATCTTTGAGTCTCGAAGTGTTTTTTCGACAGGTTCCATACATTTACGGA 7229 || |||||| ||| | | ||| | |||||| |||||| | | | | | Sbjct 417215 TCTTTTTATCCATCATAGCATCTTTTAAAACTTTTTCAACAGGTATTAAAGTGTCTCTAA 417274 Query 7230 ACAAGTCCATACACAGTTCCTCAAAACGTGCACGGGTAATGGATGTATAGA----AATCA 7285 | | || ||||| | ||| ||||| | || | || | ||| | | ||||| Sbjct 417275 AATAATCAATACATAATTCTTCAAATCTAGCTC---TACTTACAGTA-ACACTATAATCA 417330 Query 7286 ACGCCGTCGTATAACGAATCAATTTCAATGGTTGTTTGTGCCGTCGAAGATAACGTTCGC 7345 | || || | | || |||||||||||||| | ||||| | |||||||| || || Sbjct 417331 ATACCTTCAAAAAGGGAGTCAATTTCAATGGTAGCTTGTGTAGAAGAAGATAATGTACGT 417390 Query 7346 TTTGCGCGCTCACACGCCGTTCGTAAACGACGAAGGGCACGCGGGTTACCGGAAATATCT 7405 ||||| | || || |||| ||| | | | || | || || | |||| Sbjct 417391 TTTGCTCTTTCGCATTGTGTTCTTAATCTTCTTAATGCTCTACTATTTTTTGATAAATCT 417450 Query 7406 TT--CT-TATGTTTACGTTTAAACTCTTCAG----AGAAGTGTCGAAG-GAGTCTCGAAT 7457 || || ||| ||| | |||||| |||||| | || | | || || | || Sbjct 417451 TTTCCTCTATTTTTTCTTTTAAAATCTTCAACACAAAAATTTACTAAACGATT-----AT 417505 Query 7458 CGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCTC 7517 | |||||||||||||| || || ||||| || || || || || |||||||| ||||| Sbjct 417506 CAAAATCTTCACCACCTAAATGGGTATCACCTGCTGTTGCCTTAACTTCAAAAATACCAT 417565 Query 7518 CTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACGT 7577 ||||||| | | || ||||||||||| |||||||| || | || ||||| | | | Sbjct 417566 CTTCAATAGTAAGTAATGAAACATCAAATGTACCACCTCCTAAATCGAAAATTAAAATAT 417625 Query 7578 TCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCAT 7637 | | || | | | || |||| | ||| || || ||||| || || |||||||||| Sbjct 417626 TTTTTTCTCCTTTTCCTTTTTTATGTAAACCATATGCAATAGCTGCTGCAGTTGGTTCAT 417685 Query 7638 TAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTT 7697 | ||||| | | | || | || ||||| || | |||||||| || ||||| | || Sbjct 417686 TTATAATTCTCATAACATTTAACCCTGCAATTGTACCAGCATCTTTTGTTGCTTGCCTTT 417745 Query 7698 GCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGAT 7757 | ||||| ||||| || || || || || | || || | | | || || | | Sbjct 417746 GAGAATCATTAAAATATGCAGGTACTGTAATAACAGCATTTTTTATAGATTTTCCTAAAA 417805 Query 7758 ACGATTCCGCGATATCTTTCA-TTTTGGTAAGAACCATCGATGAAATCTCTTCAGCCGCA 7816 | | ||| || | ||||||| |||| |||| |||||| || || || ||||||| | Sbjct 417806 AGGCTTCTGCATTTTCTTTCATTTTTTGTAA-AACCATAGAAGATATTTCTTCAGGATGA 417864 Query 7817 AACTGTTTCGTTTCACCGTTAAAATCAACTTCAATCATGGGTTTATCCGCAGCACCGGGG 7876 || |||| |||| || | | || ||||||||||||| || || || || ||| | Sbjct 417865 AATAATTTCTTTTCGCCTTGATAAACAACTTCAATCATTGGCTTTTCTTCAATACCTGAT 417924 Query 7877 ATAACCTTATACGACCAATCTTTCATATCGTCTTGGACCTGTTGGTCCGAAAACTTTCTT 7936 | || || | | ||||| ||||||||| ||| || || | |||||| ||| Sbjct 417925 TTTACTGTAAATGGCCAATGTTTCATATCACTTTGTACAGAAGATTCTGTAAACTTCCTT 417984 Query 7937 CCGATAAGACGCTTTGCATCAAAAACTGTGTTTTTGGGGTTCATGGCTGTTTGGTTCTTC 7996 || || | | ||||||||||| ||||| |||| || ||| | || ||| || || Sbjct 417985 CCAATTAATCTTTTTGCATCAAATACTGTATTTTCTGGATTCCTTGCAACTTGATTTTTA 418044 Query 7997 GCCGCGTCCCCGATAAGACGTTCATTATTTTCCGTAAACGCGACGTACGATGGGGTCGTT 8056 || || || || || | | ||| | || ||||| || || || |||||||| ||| Sbjct 418045 GCTGCATCTCCAATTAATCTTTC---TGTGTCGGTAAAAGCTACATAGGATGGGGTTGTT 418101 Query 8057 CGATTCCCTTGGTCGTTCGCAATAATTTCTACGCGGTCGTTTTGCCAGACGCCGACGCAC 8116 | ||| ||||||||||| ||||| || || || || ||| ||| || || || || Sbjct 418102 CTATTACCTTGGTCGTTTGCAATTATATCGACATTTTCATTTCTCCATACACCAACACAG 418161 Query 8117 GAATACGTTGTTCCTAAATCAATACCGATTGCT 8149 ||||| || || || ||||||||||| || ||| Sbjct 418162 GAATATGTGGTACCCAAATCAATACCTATAGCT 418194 >seq13 Length=1355380 Score = 228 bits (252), Expect = 1e-54 Identities = 812/1246 (65%), Gaps = 46/1246 (4%) Strand=Plus/Minus Query 6553 CTTTTTCGCGTAC-TTTTCATCTTCATCTTTATACTTTTCCGCATCTTGGACCATCTTTT 6611 ||||||| | || |||| ||||||||| | | ||||| ||||| | | ||| |||| Sbjct 745364 CTTTTTCTCTTAAATTTTTATCTTCATCAGCAAATTTTTCAGCATCATTAATCATTTTTT 745305 Query 6612 CAATGTCTTCTTTCGATAATCTCCCCTTATCATTCGTAATCGTAAT--CTTTTCGGATTT 6669 | || | |||||| |||||||| || || ||||| ||||| || || |||| | ||| Sbjct 745304 CTATTTGTTCTTTTGATAATCTACCTTTGTCATTAGTAATAGTTATACCTTTACT--TTT 745247 Query 6670 ACCCGAGGCCTTATCTTCAGCACTTACATTCAAAATACCATTTGCATCAACATCGAACCT 6729 || | | |||||||| || ||||| |||||||||||| ||| ||| || | Sbjct 745246 TCCAGTTCCTTTATCTTCTGCTTCTACATGTAAAATACCATTTTTATCGACAGTAAATGT 745187 Query 6730 TACATTAATTTGTGGTGTACCCCTCGGTGCGGCTGGAATACCCGTTAAATCAAATGTACC 6789 || | ||||| ||| ||| || |||| | ||| || || | ||| |||||| | || Sbjct 745186 AACTTCAATTTTAGGTACACCTCTTTGTGCTGGTGGTATTCCTGATAATTCAAATTTTCC 745127 Query 6790 AAGTAAACTGTTATCCGTCGCCTTCTT--ACGTTCACCTTCATAGACTTTAATTGTCACC 6847 | |||| ||||| | | || | | ||| |||||| | |||| |||| || Sbjct 745126 TAATAAATGATTATCTTTAG--TTAATGCTCTTTCTCCTTCAAAAACTTGAATTAAAACA 745069 Query 6848 GCAGGTTGATTATCTTGTGCCGTTGAGAAGATTTGTTCTTTCTTAGATGGAATCGTCGTA 6907 || |||||||||||||| ||||| || ||||| ||| || | ||| || ||| Sbjct 745068 GCTGGTTGATTATCTTGATATGTTGAAAATGTTTGTGATTTTTTTGTTGGGATAACTGTA 745009 Query 6908 TTTCTCGGAATAACCGGGGTCATAATACCACCCATAGTTTCGAGTCCAAGAGACAGAGGT 6967 ||||| ||| | | ||||||||||| || | |||||| | || | || | || Sbjct 745008 TTTCTTTTAATTAATTGAGTCATAATACCTCCAACAGTTTCAATACCTAAAGTTAATGGA 744949 Query 6968 GTCACGTCCAAGAGTAACAGGTCTTGAACAGATTCGTTCCCTTCACCCGTTAAGATGGCG 7027 || || || || | || | ||||| | ||| |||| || | ||| | Sbjct 744948 GTAACATCTAATAATACAACATCTTGTA---ATT------CTTCTCCTAAAATGATACCT 744898 Query 7028 GCTTGGACCGTCGCCCCGTATGCGACCGCCTCATCGGGGTTAATCGTTTTATTCAGTTCT 7087 ||||| | | || || ||||| || || ||||| || ||||| | |||| ||||| Sbjct 744897 GCTTGAATAGCGGCACCATATGCTACTGCTTCATCTGGATTAATACCTCTATTGGGTTCT 744838 Query 7088 TTACCGTTAAAATAATCCGATAACATTTGTTGAATTTTCGGGATTCGTGTCGATCCACCG 7147 ||||| || ||| | || | |||||||| ||||| || || || || || || || Sbjct 744837 TTACCATTGAAAAAGTCTTTAATAATTTGTTGGATTTTAGGTATACGAGTTGAACCTCCT 744778 Query 7148 ACCAAAACGATTTCATTCACTTTCGATTTATCGAT-CTTTGAGTC-TCGAAGTGTTTTTT 7205 || ||||| |||||| ||| ||| | ||| | || |||| || || || | ||||| Sbjct 744777 ACTAAAACAATTTCA-TCAATTTTGCTTTTTTCATATTTTGCATCATCTAA-TACTTTTT 744720 Query 7206 CGACAGGTTCCATACATTTACGGAACAAGTCCATACACAGTTCCTCAAAACGTGCAC-GG 7264 |||||||| | | || | || || || | | ||| ||||| || | | Sbjct 744719 TAACAGGTTCTAAAGTTTCTCTAAATAAATCATCATTTAATTCTTCAAATTTGGCTCTTG 744660 Query 7265 GTAATGGATGTATAGAAATCAACGCCGTC--GTATAACGAATCAATTTCAATGGTTGT-T 7321 ||||| | | | |||| | || || |||| | ||||||||||| |||| | Sbjct 744659 TTAATGTTTCT-GAAAAATTATGTCCTTCAATTATATC--TTCAATTTCAAT--TTGTGT 744605 Query 7322 TGTGCCGTCGA-AGATAACGTTCGCTTTGCGCGCTCACACGCCGTTCGTAAACGACGAAG 7380 || | | ||||| ||| ||||| ||| | ||| ||| ||| Sbjct 744604 TGAATGAACAACTGATAAGTTTCTTTTTGCAATTTCAACTTCTTTTCTTAATTTTTGAAT 744545 Query 7381 GGCACGCGGGTTACCGGA---AATATCTTTCTTATGTTTACGTTTAAAC-TCTTCAGAGA 7436 || | ||| | || || |||| | |||| ||| ||||||| | || | | | Sbjct 744544 AGCTC---TTTTATCTGATCTAAGATCTATATTATTTTTTTTTTTAAACATTTTTATAAA 744488 Query 7437 AGTGTCGAAGGAGTCTCGAATCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCG 7496 | || | | ||| ||| ||||||||||| || || || |||| || || || | Sbjct 744487 ATAATC-CATAACTCTTTGATCAAAATCTTCACCTCCTAAATGAGTATTTCCTGCTGTTG 744429 Query 7497 CTTTGACTTCAAAGATACCTCCTTCAATGTTTAACAACGAAACATCAAACGTACCACCAC 7556 | | |||||||| | ||| || || ||| | ||||||||||| |||||||| | Sbjct 744428 CATATACTTCAAATACACCATTATCTATAACTAAAATAGAAACATCAAATGTACCACCTC 744369 Query 7557 CCAGGTCAAAAATGAGTACGTTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGA 7616 ||| ||| | | | || | || |||| || ||||| | ||| || || | Sbjct 744368 CCAAATCATATACTAATATACTTGT------TTCTTCTTTTTTATCTAAACCATAAGCTA 744315 Query 7617 TAGCCGCCGCCGTTGGTTCATTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCG 7676 ||| || || || ||||||||||||||||| | || | |||||||| | | | Sbjct 744314 AAGCAGCAGCGGTGGGTTCATTAATAATACGTACTATATTTAAACCAGCAATTGCACCAG 744255 Query 7677 CATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGT 7736 ||||||| || ||||||| ||| | ||| ||||| || || || || || || || || | Sbjct 744254 CATCTTTTGTAGCTTGTCTTTGTGCATCATTAAAATAAGCAGGTACAGTAACAACAGCAT 744195 Query 7737 CCGTGACTTTCTTACCGAGATACGATTCCGCGATATCTTTCATTTT 7782 | ||| ||||| | | | |||| || || ||||||||||| Sbjct 744194 TTTTTACTGGTTTACCCAAAAATGATTGAGCAATTTCTTTCATTTT 744149 >seq2 Length=1580255 Score = 179 bits (198), Expect = 5e-40 Identities = 361/530 (68%), Gaps = 4/530 (1%) Strand=Plus/Minus Query 115368 ACCTTCATCTCGACTTATGAGTTCATTACTAAAACATAAACC-TGGAAGTAACCCTCTCT 115426 ||||||||||| || || | |||||||||||| |||||| || || | | | | | Sbjct 1447997 ACCTTCATCTCTGCTAATTAATTCATTACTAAATGTTAAACCATGTAATTTATTTTGT-T 1447939 Query 115427 TTTTTAACCAAAAAATAGCACAAAAACTACCCGAGAAGAATATACCTTCAACACACGCAA 115486 |||| ||||||||||| ||||||||||| || || ||||||||||| ||||| ||| Sbjct 1447938 TTTTAAACCAAAAAATTGCACAAAAACTTCCACTAAATAATATACCTTCTACACATGCAT 1447879 Query 115487 AGGCTAATAAACGTTCAGCAAATGGTCGTTTCTTATCAAACCACTTCATAGCCCATTTCG 115546 || | | | ||||||||| | | | | || || ||| || ||||||| | Sbjct 1447878 TAGCCACAATTCTTTCAGCAAAAGAATTTGTATCATTAATCCATTTAGCAGCCCATAATG 1447819 Query 115547 CCTTTCTTTCGATACACGGAATTGTTTGAATTGCTTCGAATAATTGTTTCTTTTCGCTAG 115606 | || ||| || || || ||| ||| || | |||||| | | | |||| | Sbjct 1447818 CTTTATTTTTTATTGCTGGTATATTTTCAATAGCATGGAATAAATTTAACCTTTCTTTTT 1447759 Query 115607 AATTTTTTATATACTTGTCTATGAGTTTACTGTACGTTTCACCGTGTACCATTTCATTGT 115666 || ||| ||||| || || || | | ||| || |||||| |||| ||||| Sbjct 1447758 CATCTTTAATATAATTATCGATTAATAAACTATATGTTTCAGAATGTATATTTTCAACAG 1447699 Query 115667 GAGATTGATAGGCATAAAATGATCGAGCCTCCGTAAGTTGTATTTCATCTGCAAAATT-A 115725 |||| | | ||||||| | || || | | || || ||| ||| |||||| | Sbjct 1447698 CTATTTGAAAAGAATAAAATTTTTTTGCTTCAATTATTTCTACTTC-TCTTAAAAATTTA 1447640 Query 115726 TTATTTATATTTTCAAAAACTATACCATCAGAACCAGCaaaaaaaGCTAAAATATATTTT 115785 || | |||||| || ||||| |||||| | |||||||| ||||||| || |||| Sbjct 1447639 CTAGCCAAATTTTCTAATACTATTCCATCACTTGCTGCAAAAAATGCTAAAACATGTTTT 1447580 Query 115786 ATAAAATGTTTTTCATTATCACTTAATTCATTCCAATCATCCATATCTTTGGAAAAGTCT 115845 ||||||||||||||||| || |||||| | |||| | || ||| | || || || Sbjct 1447579 ATAAAATGTTTTTCATTTACATTTAATTTTTCAAAATCTTTCAAATCACTTGATAAATCA 1447520 Query 115846 ATCTCTTCAGCGGTCCAATTTGACATTTGGGCCTTTTTATACAAAGTCCA 115895 || |||||||| |||||| ||| || || ||||| || ||| |||| Sbjct 1447519 ATTTCTTCAGCTGTCCAAAATGAAGCTTCAGCTTTTTTGTAAAAATTCCA 1447470 Score = 82.4 bits (90), Expect = 1e-10 Identities = 283/439 (64%), Gaps = 2/439 (0%) Strand=Plus/Minus Query 183142 TGGTATATATGAACTAAATCCGGTACCAATACCTTCAGTTCCATTTACCAAAACGGTCGG 183201 ||| ||| |||| | |||| || || || |||||| |||||||| | || || || Sbjct 485859 TGGAATAAATGATGAATATCCAGTTCCTATTCCTTCACAGCCATTTACTAGAATCGTAGG 485800 Query 183202 TAATATAGGAACATAATAGTCAGGTTCGATTTGTTTACCGTCGTCGTCGAGATAGTTTAA 183261 | | || | |||||| | ||||| |||| || || || || | | ||| ||||| Sbjct 485799 AATAACTGGTATATAATATTGTGGTTCTATTTTTTGTCCCTCTTCATTTAAATATTTTAA 485740 Query 183262 TACTGGATCATCTTTGGGATCAAAAAGTATTCTCGCGTTTTTAGTCAATTTTGTAAATAT 183321 | |||||||| | || ||| | |||| | | | | | |||||||||||| Sbjct 485739 AATCGGATCATCATATTCATTAAATATACTTCTAGTGGATGATGCAAGTTTTGTAAATAT 485680 Query 183322 ATACCTGGTTTGACTCGCGTCTTTACCACCCATGAGACGTGTACCAAATTGACCACATGG 183381 ||| || | | | || ||||||||||| | |||||||||| || ||||| Sbjct 485679 ATATCTAGCTGCAGATGCATCTTTACCACCTTCTTTTCTACTACCAAATTGTCCGCATGG 485620 Query 183382 TTCGAGTAAATTAATATTATTCGACCCCGTAAAATTATGTGCTAATTTTACAATTGTATC 183441 ||| | ||||| || ||||| || || ||| | || || | |||| ||| || | Sbjct 485619 TTCTAAAAAATTTATGTTATTTGAACCAACAAATGTTTGAGCCATATTTATAATAGTTTG 485560 Query 183442 TGCCAAAGA-GACTTCACCGTGGTGATACGATGTTTTTTCCGAAACGTATGCGGCTAATT 183500 | || || ||| || || || ||||| | | | ||| | || || | | | || Sbjct 485559 TTGTAATGATGAC-TCTCCATGATGATATGCACTATGTTCTGCAATATAACCTACAAGTT 485501 Query 183501 GCGCAACCTTCATTTCAGATGTAAGATTCTTTGTGAAACACGCGTATAACACTTTTCGTT 183560 | ||||| || |||| | | | ||| || | || || | ||||| ||||||| || Sbjct 485500 GAGCAACTTTACATTCATTTCTTAAATTTCTTTTAAAGCAACCATATAAAACTTTTCTTT 485441 Query 183561 GGGATGGTTTTAAACCATC 183579 | ||||| | ||||| Sbjct 485440 GTCCGGGTTTCCATCCATC 485422 >seq11 Length=923120 Score = 150 bits (166), Expect = 2e-31 Identities = 1027/1640 (63%), Gaps = 41/1640 (3%) Strand=Plus/Minus Query 104482 ACACCTCTATCCGCCGCCATATCGATGATTGTTTTTTGACTCATTTCCCATACGGTTTTA 104541 ||||| | || || ||||| || || || | ||||| | |||||||| || |||||| Sbjct 449563 ACACCCCGGTCAGCGGCCATGTCAATAATATTCTTTTGCTTGATTTCCCAAACAGTTTTA 449504 Query 104542 TACAATTCCTTAAGATCATCGGGTATATCAATAATGTTTTGAACAGACCCATTTGCCTTC 104601 |||||||| || | || | ||||| || |||| | ||| ||| ||||| | Sbjct 449503 TACAATTCTTTCAAGTCGTTAGGTATTTCGCTAATATATTGGACACTTCCATTG----TG 449448 Query 104602 ACCA--TAA--GATCTTTCATTTCCTTCGACCAGAGTCCACGTTCTTTCAAA----TCGT 104653 | || ||| | | |||||| || | ||| | || ||| ||||| || | Sbjct 449447 AGCAATTAATTGTTGTTTCATATCTTCATCCCACAAACC----TCTATCAAAAAGATCTT 449392 Query 104654 TTACTAAATGTTTGTTTACGACGACAAATTCACCCGCGAGTGTTCGTCTCAAATAGATAT 104713 ||| ||||| ||||| || | |||||||| | | ||||| | || || | Sbjct 449391 TTAACAAATGAGGATTTACAACAAAGAATTCACCACTTAATACACGTCTATAGTAAATGT 449332 Query 104714 TGGTCGTATACGGTTCGAAACACTCGTTGTTCCCTAAAATCTGGGATGTGGATGCGGTAG 104773 | | ||||| ||||| ||| | || || || || ||||| || || || || || || | Sbjct 449331 TACTTGTATATGGTTCAAAAGATTCATTATTTCCCAAAATTTGTGAAGTTGAAGCTGTTG 449272 Query 104774 GCATAGGTGCAAGAAGAAGACTATT-CATAGTTCCTTT---CTTAACAAGTTTACGCATG 104829 |||||||||| | |||||| ||| | || | | | | |||| ||| || Sbjct 449271 GCATAGGTGCTAAAAGAAGTGAATTTCTTAATCCATGTATGCTTATTTTTTTTTTTAATA 449212 Query 104830 GCATTCCAATCG---TATCGACCACTAAACTTTGGGTCTCGATCCCACATATCGAATTGA 104886 || |||||| ||| | | | ||||| | || ||||||||| ||||| Sbjct 449211 A-ATCCCAATCCCAATATTTATTA-TCTACTTTTGC-----ATTCCACATATCAAATTGT 449159 Query 104887 AGAATACCTTTACTAAACGGTGACCCCTTAAACGTTTCATAAGGACCGTACATTTCGGCA 104946 | || |||| || || |||||| | | |||||| ||||| | | || || Sbjct 449158 AATATTCCTTGGCTTGCTGGACTACCCTTATATGATTCATATGGACCATGTACTTGTGCT 449099 Query 104947 AGTTCACACGACGATTCGAGTGATGCGTGGTAGATAGTTTCGAATATATCAATGTTGAGT 105006 | |||| ||| ||| | | || | || || || || ||||| | || | | Sbjct 449098 AATTCAACAGACATTTCTAAAGCCGCATAATACATTGTCTCAAATATTCTTTTATTTAAT 449039 Query 105007 TTTCTCGATTCTTCTGAACCGAATGTCATTCTTAACATGATAAACACGTCAGCGAGACCC 105066 | | | | ||| || || | ||| |||||| | ||||| || || | || Sbjct 449038 TCTTTAGCTTCGTCAGATTCATATGGATATCTTAAAAGCATAAATGTATCTGCTAATCCT 448979 Query 105067 TGAACACCAATACCGATGGGTCTGTGACGCATATTTGAACGTTTCCCGTTTTCGGTTGGG 105126 || || || || || || |||| || | ||||||| || | | || ||||| Sbjct 448978 TGTACTCCTATTCCAATAGGTCGATGCCTTTTATTTGATTTTTCAGCTTCTTTAATTGGG 448919 Query 105127 TAAAAGTTTTTATCAATAACCTTGTTTAAGTTACGTGTAACCATTTTCGTAACACGATGT 105186 ||| | ||| | ||||||| || | ||| || | |||| ||||| |||| | || | Sbjct 448918 TAATAATTTCTTTCAATAATTTTATCTAAATTTCTAGTAATAATTTTAGTAATATCATAT 448859 Query 105187 AACTCTTCATGGTTAAACTCGTTCTTCTCGACATCAACGTATTTTGGTAACGCGATTGAT 105246 || | || | ||||| || || || || |||||| |||| ||| || ||||| Sbjct 448858 AATTTTTTAAAATTAAATTCTTTTTTTTCTCTATCAACAAATTTACATAATGCAATTGAA 448799 Query 105247 GCGAGATTACATACGGCGGTTTCTTCCTTATCCGTAAACTCCAGAATTTCTGTACACAAA 105306 || | |||||| || || ||| || || | || | ||||| ||| || Sbjct 448798 GCCAAATTACAAACAGCTACTTCATCAGGTGAGGTGTATTCAATTATTTCACAACATAAG 448739 Query 105307 TTTGATGATTTAATCGTACCAACGTGTTTATGGTTCGACTTTTCATTACACGCGTCTTTG 105366 || ||||||| || || | | ||| || || || || ||| || || ||||| Sbjct 448738 TTACTACATTTAATTGTTCCTAAATTTTTTTGATTAGATTTAGAATTGCATGCATCTTTA 448679 Query 105367 TAAAGCATATATGGGGTTCCCGTTTCACTTTGGGATT-TAATAATTGCTTTCCAAATCTC 105425 || | ||||||||| || |||||| |||| || ||||| | || ||| | || Sbjct 448678 TATAACATATATGGTACACCAGTTTCAATTTGACTTTGTAATA-TAGCAAACCATAAATC 448620 Query 105426 CGAAGCTGGTACAACTTTAGTTGCGATACCTTCAGATTCGTATTTCTCGTAAAGATCTTC 105485 || | || ||| || | | | ||| ||| ||||| || | | ||| Sbjct 448619 TTGTGCAAGGACTGTTTTTTTTCCTAAATTTTCTTCTTCATATTTTGTATATAACTTTTC 448560 Query 105486 AAACTCTTTACCGTACACGTCTGAAAGACCCTTTGCC--TGATCAGGACAAAACAATGAC 105543 ||| || | || | || | ||| | | | | || |||||| | || | | Sbjct 448559 AAATTCGTCTCCCCAAGATTCACTTAAACC--TGGACATTCATTAGGACACATTAAAGTC 448502 Query 105544 CAATTACCATCGGATTCAACGCGTTTCATGAACAAATCTGGAATCCACATGGCTGAAAAG 105603 || || || || || | |||||| || ||||| || | ||| || || |||| Sbjct 448501 CAGTTTTTATTTTCTTTTACTCTTTTCATAAATAAATCAGGTACCCAAATAGCATAAAAT 448442 Query 105604 AGGTCTCGACACCTCGCCTCTTCATCACCTTGATTCAAACGAATTTCGAGAAAATCGAGA 105663 | |||||| || ||||| | ||| ||||| | | || | ||| || | | Sbjct 448441 AAATCTCGAGCTCTTAATTCTTCTTTACCATGATTTTTTCTTAAATCTAAAAATTCAAAA 448382 Query 105664 ATATCGGCGTGCCATGGTTCTAAATAGACTGCAATAGACCCTTTACGACGCCCCGC---T 105720 ||||| | |||||||| |||| ||| ||||||| ||| ||||| | ||| | | Sbjct 448381 ATATCTGAATGCCATGGCTCTATATATACTGCAAAAGATCCTTTTCTTTTCCCTCCACCT 448322 Query 105721 TGATTGACATATCTTGCGGTTGAGTTATACACTCGTAACATTGGAATAATACCATCGGAT 105780 |||| ||||| ||||| || ||| | || | ||||||||||| | ||||| ||| Sbjct 448321 TGATCTACATACCTTGCCGTATCATTAAAAACCCTTAACATTGGAACTAAACCATTTGAT 448262 Query 105781 GTTCCATTTGTTCCACGAATATGTGATTTATTTGCACGTACATCGTGAACGTGTAAC-CC 105839 | ||||| ||||| | ||||| || || | | | || ||| || || | ||| || Sbjct 448261 ATACCATTAGTTCCTCTAATATAAGAATTCTGACCTCTTATATCTTGTACA-GCAACTCC 448203 Query 105840 AATACCCCCAGCCCACTTACTGATACGCGCACACTCTTTTACTGTATCGTAAATACCGTC 105899 || || || || ||||| || ||||| | ||||| ||| || | ||||| || Sbjct 448202 TATGCCGCCTGCTGTTTTACTAATCAAAGCACATTGTTTTAATGTTTCAAATATACCTTC 448143 Query 105900 GATACTATCTTCCTTATTCGCAATCAGGAAACACGATGACATTTGTGGTCTGGGTGTACC 105959 ||| |||| || | | | || ||||| ||||||||||| |||| || || || Sbjct 448142 AATAGAATCTGATTTCATAGATAATAGAAAACAAGATGACATTTGCGGTCGTGGGGTTCC 448083 Query 105960 AGCATTGAACAGAGTTGGTGTTGCATGAATGAACAAACCTTTCGATAACGCTTCGTATGT 106019 | ||| || | || ||||| ||||| |||| | || || | | ||||| Sbjct 448082 TGAATTAAATAATGTGGGTGTAGCATGTGTGAAATATTTTTGAGACATTAAATGATATGT 448023 Query 106020 TTCCAGGACGTGATCAATATCGTGTCCATGAATACCAATAGCGACGCGCATATAGAGATA 106079 ||| | | | |||| ||| | | |||||| ||||| | || | ||| | | || Sbjct 448022 TTCTAAAGCTTTTTCAAGATCATCTATATGAATTCCAATTGACACTCTCATTAATAAATG 447963 Query 106080 TTGGGGTGTTTCAATAATTT 106099 ||| || ||||||||||| Sbjct 447962 TTGAGGACGTTCAATAATTT 447943 >seq14 Length=1633590 Score = 118 bits (130), Expect = 1e-21 Identities = 280/416 (67%), Gaps = 19/416 (5%) Strand=Plus/Minus Query 11280 ATCAAATCTACCGGGGC--GTAATAACGCATCGTCGAGTATATCGATACGGTTTGTTGCA 11337 ||||||||| || || | |||||| ||| || | |||||||| | |||||| | Sbjct 1085013 ATCAAATCTTCCTGGTCTTGTAATA--GCAGGATCTAAAATATCGATTCTATTTGTTCCT 1084956 Query 11338 CCTATAACAACAATTTCAG--TTTCAT-TCTCGAAACCATCCATTTCTGTTAATAATTGG 11394 ||| |||||| | || | || || | | ||| |||||||||||| | | ||| Sbjct 1084955 GCTAAAACAACTACTTGATCATTAGATGTATGGAACCCATCCATTTCTACAAGCATCTGG 1084896 Query 11395 TTAATTGTTTGTTCACGCTCATCGTTTGCC------GCAAACCCATTCATACTTCTTTTC 11448 || | || | ||| | ||||| ||| | ||||| || | | ||| || Sbjct 1084895 TTTAGAGTATTTTCTCTTTCATCATTTCCTCCACCTGCAAAACCTCCCTTTGATCTCTTT 1084836 Query 11449 TTACCAATCGCATCAATTTCATCTATAAAGATAATACACGGTTGATTTTCACGTGCCAAT 11508 | |||| ||||| |||||||||||||| |||||| | ||| || || | ||| Sbjct 1084835 CTCCCAACAGCATCTATTTCATCTATAAAAATAATAGATGGTGCATGTTTTCTTGCTTGA 1084776 Query 11509 TCAAATATATCACGGACTCTTTTTGCGCCTACGCCTACAAACATTTCAACGAACGATGAC 11568 ||||| || ||||||||| || |||| |||||||| | ||||| || || || Sbjct 1084775 GAAAATAATTCTCGGACTCTTGATGGTCCTATTCCTACAAATACTTCAATAAA--ATCAC 1084718 Query 11569 ---CCCGAACACTGAATAAAAGGAACGGAAGATTCACCCGCTATAGCACGTGCTAAAAGT 11625 | | || | | || ||||||||| || ||| || || | ||| |||||| | | Sbjct 1084717 TTCCACTAATATTAAA-AAAAGGAACATTAGCTTCTCCAGCAACAGCTTTTGCTAATAAT 1084659 Query 11626 GTTTTACCTGTACCTGGTTTACCTGTTAATAATGCACCCCTTGGTATTTTAGCACC 11681 ||||| || || || ||| ||| |||||||||||| |||||||||| ||||| Sbjct 1084658 GTTTTTCCGGTTCCCGGTGCACCACATAATAATGCACCTTTTGGTATTTTTGCACC 1084603 Score = 96.9 bits (106), Expect = 4e-15 Identities = 196/289 (68%), Gaps = 8/289 (3%) Strand=Plus/Plus Query 6708 CATTTGCATCAACATCGAACCTTACATTAATTTGTGGTGTACCCCTCGGTGCGGCTGGAA 6767 |||||||||| ||||| || | || | ||||||||| ||| || || || | ||| | Sbjct 581120 CATTTGCATCTACATCAAATGTGACTTCAATTTGTGGAACACCTCTTGGGGCTGGTGGTA 581179 Query 6768 TACCCGTTAAATCAAATGTACCAAGTAAACTGTTATCCGTC----GCCTTCTTACGTTCA 6823 |||| ||||||||||| ||| ||| | |||| ||| ||| | | | ||| Sbjct 581180 TACCAACTAAATCAAATGAACC---TAACATTTTAT-TGTCACATGCCATTTCTCTTTCT 581235 Query 6824 CCTTCATAGACTTTAATTGTCACCGCAGGTTGATTATCTTGTGCCGTTGAGAAGATTTGT 6883 |||| | | ||||| || | || || |||||||||| ||| ||||| || | ||| Sbjct 581236 CCTTGAAATACTTTGATACTGACTTGAGTTTGATTATCTGCTGCAGTTGAAAATACTTGA 581295 Query 6884 TCTTTCTTAGATGGAATCGTCGTATTTCTCGGAATAACCGGGGTCATAATACCACCCATA 6943 ||| || | |||||| || |||||||| ||| | || | || |||||| | Sbjct 581296 GATTTTTTGGTTGGAATAGTTGTATTTCTATTAATTAATTTTGTAAAAACACCACCTAAG 581355 Query 6944 GTTTCGAGTCCAAGAGACAGAGGTGTCACGTCCAAGAGTAACAGGTCTT 6992 ||||| | || | ||| | |||| | || || || ||||| | |||| Sbjct 581356 GTTTCAATACCTAAAGATAAAGGTATAACATCTAATAGTAATAAATCTT 581404 >seq5 Length=2497646 Score = 91.5 bits (100), Expect = 2e-13 Identities = 169/247 (68%), Gaps = 6/247 (2%) Strand=Plus/Plus Query 11438 TACTTCTTTTCTTACCAATCGCATCAATTTCATCTATAAAGATAATACACGGT---TGAT 11494 |||||||||| ||||| ||||| |||||||| ||||| | ||| || ||| || | Sbjct 1118785 TACTTCTTTTAGAACCAACTGCATCTATTTCATCAATAAAAACAATGCAAGGTGCATGCT 1118844 Query 11495 TTTCACGTGCCAATTCAAATATATCACGGACTCTTTTTGCGCCTACGCCTACAAACATTT 11554 ||| ||| || ||| | || | | |||| |||| || || || |||||||||| Sbjct 1118845 TTTT---TGCGGTTTGAAAAAGCTCTCTTATTCTTCTTGCACCCACACCAACAAACATTT 1118901 Query 11555 CAACGAACGATGACCCCGAACACTGAATAAAAGGAACGGAAGATTCACCCGCTATAGCAC 11614 | | || ||| || || || |||||||| || | ||| || || ||||| | Sbjct 1118902 CTTCAAATTCTGAACCAGATGCTTGGATAAAAGGTACATTTGCTTCTCCTGCAATAGCCC 1118961 Query 11615 GTGCTAAAAGTGTTTTACCTGTACCTGGTTTACCTGTTAATAATGCACCCCTTGGTATTT 11674 || | | |||||| ||||| || |||| ||| | ||||||| ||| | || | || Sbjct 1118962 TAGCAATTAATGTTTTTCCTGTTCCAGGTTCACCCGATAATAATATACCTTTGGGCAATT 1119021 Query 11675 TAGCACC 11681 | ||||| Sbjct 1119022 TTGCACC 1119028 >seq6 Length=2450810 Score = 87.8 bits (96), Expect = 2e-12 Identities = 164/235 (70%), Gaps = 11/235 (5%) Strand=Plus/Minus Query 22441 AAATTTTATCAGGCATCTACATCAGAGCTCTACGGTAAAGTAA-ATGAAACTCCA----C 22495 ||||||||| | || || |||||||| | || ||||| ||| || || ||| | Sbjct 861750 AAATTTTATAATGCCTCAACATCAGAATTATATGGTAA--TAATATTCAAAGCCAATGTC 861693 Query 22496 AAAATGAAAATACACCGTTTTACCCGCGTTCACCATATGGGGTAGCTAAATTG-ATGGG- 22553 | |||||||||||||| ||| | || |||||| ||||| ||| ||||| || | Sbjct 861692 ATAATGAAAATACACCATTTAATCCAGTTTCACCTTATGGCACAGCAAAATTATATAGTC 861633 Query 22554 ATATTGGGCGACAGTTAATTATAGAGAATCATACGGTATGTTTGCATGCAATGGTATAAT 22613 ||| | ||| |||||||||||| |||| ||||||| ||||||||| | Sbjct 861632 ATAATATA--ACAAAAAATTATAGAGAAGCATATAATATGTTTTGTGTTAATGGTATATT 861575 Query 22614 GTTCAACCACGAATCACCGAGACGGGGTGAAAACTTCGTGACACGAAAAATAACA 22668 || ||||| ||| || ||||| ||||||| || || ||| |||||| ||| Sbjct 861574 ATTTAACCATGAAAGTCCAAGACGTGGTGAAACATTTGTTACAAAAAAAATTACA 861520 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 635129005081520