Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmodium_20berghei_20[genbank_20GCA_5F900044335.1_202016-02-18] 478 sequences; 18,811,223 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq2 86.0 7e-12 >seq2 Length=1580255 Score = 86.0 bits (94), Expect = 7e-12 Identities = 89/117 (76%), Gaps = 0/117 (0%) Strand=Plus/Minus Query 169145 AAGACTGGGCCAGAAGTAGTGGATCATATTTAGGATGAGACCCTTGATGTGAGAACCATC 169204 |||||||||||| || | || |||||||| | | | ||||||||||||||| ||||| Sbjct 484992 AAGACTGGGCCAAAATTTATGAATCATATTAATTAATAAACCCTTGATGTGAGATCCATC 484933 Query 169205 ATTATCGGCATCTGTCATAATCATAAGACGACCATAGCGAAGTTCAGAAACATCTTG 169261 || ||| ||| ||||||||||| | | |||||| | |||| | || |||||| Sbjct 484932 ATAATCCTGATCCGTCATAATCATTAAAGAACCATATCTAAGTCCTTTAATATCTTG 484876 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589977274864720