Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmodium_20berghei_20[genbank_20GCA_5F900044335.1_202016-02-18] 478 sequences; 18,811,223 total letters Query= NC_020864.1 Length=205622 Score E Sequences producing significant alignments: (Bits) Value seq12 533 2e-146 seq13 316 3e-81 seq11 203 4e-47 seq3 145 1e-29 seq14 120 4e-22 >seq12 Length=816096 Score = 533 bits (590), Expect = 2e-146 Identities = 1106/1632 (68%), Gaps = 17/1632 (1%) Strand=Plus/Minus Query 195298 AGCTATTGGTATCGATTTAGGAACTACTTACTCATGTGTTGGTGTATGGCAAAATGATCG 195357 |||||| ||||| ||||| || || || || || ||||||||||||||| |||||| Sbjct 418194 AGCTATAGGTATTGATTTGGGTACCACATATTCCTGTGTTGGTGTATGGAGAAATGAAAA 418135 Query 195358 TGTAGAGATTATCCCGAATGACCAAGGAAACCGTACAACTCCATCGTACGTTGCCTTTAC 195417 ||| || || || | || |||||||| || | ||||| ||||| || || || ||||| Sbjct 418134 TGTCGATATAATTGCAAACGACCAAGGTAATAGAACAACCCCATCCTATGTAGCTTTTAC 418075 Query 195418 AGATAATGAACGTCTCGTTGGAGATGCCGCAAAAAATCAGACAGCTATGAACCCTATCAA 195477 || | ||| | | |||||||||| || |||||||| || | ||| || || Sbjct 418074 CGACACAGAAAGATTAATTGGAGATGCAGCTAAAAATCAAGTTGCAAGGAATCCAGAAAA 418015 Query 195478 TACTGTCTTTGACGCGAAGCGTCTTATTGGTCGCAAGTTTTCGGATAAGAAAGTCCAAGA 195537 ||| || ||||| || || | | ||||| | |||||| | || || ||| Sbjct 418014 TACAGTATTTGATGCAAAAAGATTAATTGGAAGGAAGTTTACAGAATCTTCTGTACAAAG 417955 Query 195538 CGATATAAAGGACTGGTCTTATGAAGTTGTTCCCGGTGTGGCTGATAAGCCTATGATTAA 195597 ||||| || | ||| | | | ||| | ||| | | || ||||| |||||| | Sbjct 417954 TGATATGAAACATTGGCCATTTACAGTAAAATCAGGTATTGAAGAAAAGCCAATGATTGA 417895 Query 195598 TGTTGAATTTCACGGTGAGAAGAAACAATTTGCTCCCGAAGAAATTTCGTCTATGGTGTT 195657 |||| | ||| || || |||||| |||| ||| |||||||| || |||||||| || Sbjct 417894 AGTTGTTTATCAAGGCGAAAAGAAATTATTTCATCCTGAAGAAATATCTTCTATGGTTTT 417835 Query 195658 GATTAAGATGAAGGAGACTGCGGAATCTTTCATGGGTAAAACTGTGAAAGATGCAGTTGT 195717 || ||||| || | ||| ||| | || | || ||| || | ||| |||| ||| | Sbjct 417834 ACAAAAAATGAAAGAAAATGCAGAAGCCTTTTTAGGAAAATCTATAAAAAATGCTGTTAT 417775 Query 195718 GACTGTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCTGCTGCTAT 195777 || |||||||| || || | |||||| ||| | || || ||||| || |||| | | || Sbjct 417774 TACAGTACCTGCATATTTTAATGATTCTCAAAGGCAAGCAACAAAAGATGCTGGTACAAT 417715 Query 195778 TGCGGGTCTAAACTGTCTTAGAATTATCAATGAACCAACAGCGGCTGCAATTGCTTATGG 195837 ||| || |||| | | |||||||| ||||||||||| || || || ||||| ||||| Sbjct 417714 TGCAGGGTTAAATGTTATGAGAATTATAAATGAACCAACTGCAGCAGCTATTGCATATGG 417655 Query 195838 TCTGGACAAGAACAAGGACGA--AGATAAAAATGTATTGATCTTTGATCTCGGTGGTGGT 195895 | | ||| || ||||| | ||| |||||| | || || || ||| | || |||||| Sbjct 417654 TTT--ACATAAAAAAGGAAAAGGAGAAAAAAATATTTTAATTTTCGATTTAGGAGGTGGT 417597 Query 195896 ACGTTTGATGTCTCACTTCTCAATATTGAAGGTGGTATATTCGAAGTAAAGGCTACTGCT 195955 || |||||||| ||| | || | |||||||| |||||| || ||||| ||||| || || Sbjct 417596 ACATTTGATGTTTCATTACTTACTATTGAAGATGGTATTTTTGAAGTTAAGGCAACAGCA 417537 Query 195956 GGTGATACTCATCTAGGTGGTGAAGATTTCGATGCACGTCTTCTCCGTCATTTGT-CTGA 196014 |||||||| ||| |||||||||||||||| ||| ||| | | | ||||| ||| Sbjct 417536 GGTGATACCCATTTAGGTGGTGAAGATTTTGATAATCGTTTAGTAAAT-TTTTGTGTTGA 417478 Query 196015 TGAGTTCCGTCGAAAGAATA-AG--AAAGATATTTCTGGAAATCCTAGGGCTCTTCGTCG 196071 || || |||| |||| || |||||| | || |||| ||| || | | | Sbjct 417477 AGATTTTAAAAGAAAAAATAGAGGAAAAGATTTATCAAAAAATAGTAGAGCATTAAGAAG 417418 Query 196072 GCTTAGGACTGCATGTGAACGTGCCAAACGAACTCTCTCTTCTACGGCTCAAACAATGGT 196131 | || || ||| ||| | || ||||| || | |||||| | | ||| | | | Sbjct 417417 ATTAAGAACACAATGCGAAAGAGCAAAACGTACATTATCTTCTTCTACACAAGCTACCAT 417358 Query 196132 TGAGATTGATTCGTTGTTTGACGGAATTGACTTCTA-TACAACTATTACCCGTGCACGTT 196190 ||| ||||| || | ||||| || ||||| || || | ||| | | | || | | Sbjct 417357 TGAAATTGACTCCCTTTTTGAAGGTATTGA-TTATAGTGTTACTGTAAGTAGAGCTAGAT 417299 Query 196191 TTGAAGAGTTAAACTCTGATTTGTTTAGGAAGTGTATGGAACCTGTTGAACAAGTACTTC 196250 ||||||| ||| ||||| ||||| | | | |||||||||| |||| | Sbjct 417298 TTGAAGAATTATGTATTGATTATTTTAGAGACACTTTAATACCTGTTGAAAAAGTTTTAA 417239 Query 196251 GTGACGCAAAGATGGATAAGTCTAAGGTTGATGAAATTGTCCTTGTGGGAGGATCAACCC 196310 || || | ||||||||| | ||| ||||| |||| | || || || ||||| Sbjct 417238 AAGATGCTATGATGGATAAAAAGAGTGTTCATGAAGTTGTATTAGTTGGTGGTTCAACAA 417179 Query 196311 GTATTCCGAAGATTCAACAGATGCTTTCTAG-CTTCTTCAATAATAAAGATTTAAACAAA 196369 | ||||| || || ||| | || | || ||||| ||| ||||| | | | Sbjct 417178 GAATTCCAAAAATCCAA-ACATTAATAAAAGAATTCTTTAATGGAAAAGAAGCATGTAGA 417120 Query 196370 ACGATCAACCCGGATGAAGCAGTTGCTTATGGTGCGGCCGTTCAGGCTGCTATTCTCTCA 196429 | || || || |||||||| ||||| |||||||| || ||||| |||||||| | || Sbjct 417119 TCAATAAATCCTGATGAAGCTGTTGCATATGGTGCTGCTGTTCAAGCTGCTATATTATCT 417060 Query 196430 GGTGTTGACAAT--AATAACGTCCAAGATCTTCTGCTACTTGATGTTGCACCCGTATCCC 196487 || | | |||| ||| || |||||| | | || | ||||| || | || Sbjct 417059 GGAGAT--CAATCAAATGCAGTACAAGATTTATTATTATTAGATGTATGTTCCTTGTCTT 417002 Query 196488 TGGGTCTTGAAACAGCGGGTGGTGTTATGACTAAAATTATTGATAGGAACACAACTATTC 196547 | || | ||||| || |||||||||||||||||| | ||||| || || ||||| || | Sbjct 417001 TAGGATTAGAAACTGCAGGTGGTGTTATGACTAAATTAATTGAAAGAAATACAACAATCC 416942 Query 196548 CGACTAAGAAGGAACAAGTCTTTTCAACGTATTCCGATAATCAACCAGGTGTTCATATTC 196607 | |||| || ||| | ||| |||| ||| | ||||| ||||||||||| || | Sbjct 416941 CAGCTAAAAAAAGCCAAATATTTACAACATATGCTGATAACCAACCAGGTGTATTAATAC 416882 Query 196608 AAGTATATGAAGGAGAACGCTCCCGTGCAAAGGATAACCATCTACTTGGAACTTTCGATT 196667 ||||||||||||| ||| | | |||| ||||| || || | |||| || ||| Sbjct 416881 AAGTATATGAAGGGGAAAGAGCTTTAACAAAAGATAATAATTTATTAGGAAAATTTCATT 416822 Query 196668 TGACGGGGATTCCAGCTGCACCCAGAGGTGTTCCACAGATTAATGTTTGCTTCGATATAG 196727 | || |||||| |||| || ||| || ||||| ||| | ||| || ||||| | Sbjct 416821 TAGATGGAATTCCACCTGCTCCTAGAAAAGTACCACAAATTGAAGTTACTTTTGATATTG 416762 Query 196728 ACGCAAATGGAATTCTAAACGTCACAGCTGAGGACAAGGCTTCTGGCAAATCTGAAAAGA 196787 | |||||||| ||| |||| |||||||||| || || | |||| ||| | | | Sbjct 416761 ATGCAAATGGTATTTTAAATGTCACAGCTGTTGAAAAAAGTACTGGTAAACAAAATCATA 416702 Query 196788 TTGTGATTACCAATGACAAGGGGCGGCTTTCTAAGGAGGAAATTGAACGTATGGTTCAAG 196847 || ||||| ||||| || || | | || || |||||||| | |||||| | | Sbjct 416701 TTACAATTACTAATGATAAAGGTAGATTATCCCCTGAAGAAATTGATAGAATGGTTAATG 416642 Query 196848 ATGCGGAAAAGTACAGGGAAGAAGACGAGGTATATGAGAAACAGATGAAAGCTATAAATG 196907 |||| ||||| || | | |||||| || | | | | ||| || |||| | |||| Sbjct 416641 ATGCTGAAAAATATAAAGCAGAAGATGAAGAAAACAAAAAAAGAATTGAAGCCAGAAATA 416582 Query 196908 ATCTAGAAAATT 196919 || ||||||| Sbjct 416581 GCCTTGAAAATT 416570 >seq13 Length=1355380 Score = 316 bits (350), Expect = 3e-81 Identities = 1066/1638 (65%), Gaps = 50/1638 (3%) Strand=Plus/Plus Query 195301 TATTGGTATCGATTTAGGAACTACTTACTCATGTGTTGGTGTATGGCAAAATGATCGTGT 195360 |||||||||||||||||| |||||||| ||||||||||||| |||||| | || Sbjct 743791 TATTGGTATCGATTTAGGTACTACTTATAGTTGTGTTGGTGTATTTAAAAATGGAAGAGT 743850 Query 195361 AGAGATTATCCCGAATGACCAAGGAAACCGTACAACTCCATCGTACGTTGCCTTTACAGA 195420 || || | ||||| ||| || |||| || ||||| || ||| | ||| || Sbjct 743851 TGAAATATTAAACAATGATTTAGGTAATCGTATTACACCATCATATGTTTCATTTGTTGA 743910 Query 195421 TAATGAACGTCTCGTTGGAGATGCCGCAAAAAATCAGACAGCTA---TGAACCCTA-TCA 195476 | ||| | ||||| || || || ||| | ||| ||||| | | || | ||| Sbjct 743911 TGGAGAAAGAAAAGTTGGTGAAGCAGCTAAA--TTAGA-AGCTACTTTACATCCAACTCA 743967 Query 195477 ATACTGTCTTTGACGCGAAGCGTCTTATTGGTCGCAAGTTTTCGGATAAGAAAGTCCAAG 195536 | ||||| ||||| | || | ||||||||| | || ||| || || |||| | Sbjct 743968 A-ACTGTATTTGATGTTAAAAGACTTATTGGTAGGAAATTTGATGACAAAGAAGTAGCAA 744026 Query 195537 ACGATATAAAGGACTGGTCTTATGAAGTTGTTCCCGGTGTGGCTGATAAGCCTATGATTA 195596 | |||| || | | |||||| | || | || | | || || | || | Sbjct 744027 AAGATAGAACTTTATTACCATATGAAATAGTAAACAATGAAGGT---AAACCAAATATAA 744083 Query 195597 ATGTTGAATTTCACGGTGAGAAGAAACAA-----TTTGCTCCCGAAGAAATTTCGTCTAT 195651 ||| || | | ||| || | | ||||| || || ||||| |||| Sbjct 744084 GAGTTCAAATAAA-----AGACAAACCCACTACTTTTGCACCTGAGCAAATTAGTGCTAT 744138 Query 195652 GGTGTTGATTAAGATGAAGGAGACTGCGGAATCTTTCATGGGTAAAACTGTGAAAGATGC 195711 ||| || || ||||| || | ||| |||| || |||||||| | || ||| |||| Sbjct 744139 GGTTTTAGAAAAAATGAAAGAAATTGCTCAATCATTTTTGGGTAAACCAGTAAAAAATGC 744198 Query 195712 AGTTGTGACTGTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCTGC 195771 ||||| |||||||||||||| || | |||| ||||| |||| || ||||| || |||| Sbjct 744199 TGTTGTTACTGTACCTGCTTATTTTAATGATGCACAAAGACAAGCTACAAAAGATGCTGG 744258 Query 195772 TGCTATTGCGGGTCTAAACTGTCTTA-GAATTATCAATGAACCAACAGCGGCTGCAATTG 195830 ||| ||||| ||| |||| | | || | ||||| |||||||| || || ||||| | | Sbjct 744259 TGCAATTGCTGGTTTAAA-TATAGTACGTATTATTAATGAACCCACCGCTGCTGCTTTAG 744317 Query 195831 CTTATGGTCTGGACAAGAACAAGGACGAAGATAAAAATGTATTGATCTTTGATCTCGGTG 195890 |||||||| | || || || ||||| | || | |||| | | |||| | || | Sbjct 744318 CTTATGGTTTAGATAAAAAA------GAAGAAACAAGTATATTAGTATATGATTTGGGAG 744371 Query 195891 GTGGTACGTTTGATGTCTCACTTCTCAATATTGAAGGTGGTATATTCGAAGTAAAGGCTA 195950 ||||||| |||||||| || || | ||| || |||| |||| |||||| | || | Sbjct 744372 GTGGTACATTTGATGTTTCTATTTTAGTTATAGATAATGGTGTATTTGAAGTATATGCAA 744431 Query 195951 CTGCTGGTGATACTCATCTAGGTGGTGAAGATTTCGATGCACGTCTTCTCCGTCATTTGT 196010 | || || |||||||| |||| ||||||||||| ||| | | || | | |||| | Sbjct 744432 CAGCAGGAAATACTCATTTAGGAGGTGAAGATTTTGATCAAAGAGTTATGGATTATTT-T 744490 Query 196011 CTGATGA-GTTCCGTCGAAAGAATAAGAAAGATATTTCTGGAAATCCTAGGGCTCTTCGT 196069 | | | ||| ||| ||||| | |||| || | || || ||| ||| Sbjct 744491 ATAAAAATGTTTAAAAAAAAAAATAATATAGATCTTAGATCAGATAAAAGAGCTATTCAA 744550 Query 196070 CGGCTTAGGACTGCATGTGAACGTGCCAAACGAACTCTCTC--TTCTACGGCTCAA-ACA 196126 | || | | | |||| ||| ||| ||| | || || | | |||| ||| Sbjct 744551 AAATTAAGAAAAGAAGTTGAAATTGCAAAAAGAAACTTATCAGTTGTTCAT-TCAACACA 744609 Query 196127 ATGGTTGAGATTGATTCGTTGTTTGACGGAATTGACTTCTATACAACTATTACCCGTGCA 196186 | |||| ||||| | |||| ||| | | || | ||| | || | || Sbjct 744610 AA--TTGAAATTGAAGATATAATTGAAGGACATAATTTTTCAGAAACATTAACAAGAGCC 744667 Query 196187 CGTTTTGAAGAGTTAAACTCTGATTTGTTTAGGAAGTGTATGGAACCTGTTGAACAAGTA 196246 |||||||| ||||| |||||| ||||| | | | ||||||||| || ||||| Sbjct 744668 AAATTTGAAGAATTAAATGATGATTTATTTAGAGAAACTTTAGAACCTGTTAAAAAAGTA 744727 Query 196247 CTTCGTGACGCAAAG-ATGGATAAGTCTAAGGTTGATGAAATTGTCCTTGTGGGAGGATC 196305 | ||| ||||| ||| | || | || ||||||||||||| | || ||||| || Sbjct 744728 TTAGATGATGCAAAATATGAAAAAAGCAAAA-TTGATGAAATTGTTTTAGTAGGAGGTTC 744786 Query 196306 AACCCGTATTCCGAAGATTCAACAGATGCTTTCTAGCTTCTTCAATAATAAAGATTTAAA 196365 ||| ||||| || || || ||||| || || ||| |||||| |||||| || Sbjct 744787 AACTCGTATACCTAAAATCCAACAAATTATTAAAGACTTTTTCAATGGTAAAGAACCCAA 744846 Query 196366 CAAAACGATCAACCCGGATGAAGCAGTTGCTTATGGTGCGGCCGTTCAGGCTGCTATTCT 196425 | | || || || ||||||||||| || |||||||| || |||| || | ||| | Sbjct 744847 TAGAGGTATTAATCCAGATGAAGCAGTAGCATATGGTGCCGCTATTCAAGCAGGTATCAT 744906 Query 196426 CTCAGGTGTTGACAATAATAACGTCCAAGATCTTCTGCTACTTGATGTTGCACCCGTATC 196485 | ||| | || ||| || ||||| || | || | |||||| | || || | Sbjct 744907 TTTAGGAG-----AAGAATTAC----AAGATGTTGTATTATTAGATGTTACTCCATTAAC 744957 Query 196486 CCTGGGTCTTGAAACAGCGGGTGGTGTTATGACTAAAATTATTGATAGGAACACAACTAT 196545 | ||| ||||||| | || ||| |||||||| || | ||| | || || ||| ||| Sbjct 744958 TTTAGGTATTGAAACTGTTGGAGGTATTATGACTCAATTAATTAAAAGAAATACAGTTAT 745017 Query 196546 TCCGACTAAGAAGGAACAAGTCTTTTCAACGTATTCCGATAATCAACCAGGTGTTCATAT 196605 || || || || |||| |||||||| ||| ||||||||||||| |||| || Sbjct 745018 CCCAACAAAAAAATCACAAACATTTTCAACATATCAAGATAATCAACCAGCTGTTTTAAT 745077 Query 196606 TCAAGTATATGAAGGAGAACGCTCCCGTGCAAAGGATAACCATCTACTTGGAACTTTCGA 196665 |||||| | |||||||||| | | | || ||||| ||| || | |||| || || Sbjct 745078 TCAAGTTTTTGAAGGAGAAAGAGCATTAACTAAAGATAATCATTTATTAGGAAAATTTGA 745137 Query 196666 TTTGACGGGGATTCCAGCTGCACCCAGAGGTGTTCCACAGATTAATGTTTGCTTCGATAT 196725 || | || || ||| | |||| |||||||| || | ||| | ||| || | | Sbjct 745138 ATTATCAGGAATACCACCAGCACAAAGAGGTGTACCTAAAATTGAAGTTACATTTACTGT 745197 Query 196726 AGACGCAAATGGAATTCTAAACGTCACAGCTGAGGACAAGGCTTCTGGCAAATCTGAAAA 196785 || |||||| ||| || | || ||| || || || | |||| ||| | || Sbjct 745198 CGATAAAAATGGTATTTTACATGTAGAAGCAGAAGATAAAGGAACTGGAAAAAGTAAAGG 745257 Query 196786 GATTGTGATTACCAATGACAAGGGGCGGCTTTCTAAGGAGGAAATTGAACGTATGGTTCA 196845 || ||||| |||||||| || | | || || || |||| ||| ||| || | Sbjct 745258 TATAACTATTACTAATGACAAAGGTAGATTATCAAAAGAACAAATAGAAAAAATGATTAA 745317 Query 196846 AGATGCGGAAAAGTACAGGGAAGAAGA-CGAGGTATATGAGAAACAGATGAAAGCTATAA 196904 ||||| ||||| | || ||||| | | || |||||| || || || | | || Sbjct 745318 TGATGCTGAAAAATTTGCTGATGAAGATAAAAATTTAAGAGAAAAAGTTG-AATCAAAAA 745376 Query 196905 ATGATCTAGAAAATTCTA 196922 || || |||| |||| || Sbjct 745377 ATAATTTAGATAATTATA 745394 >seq11 Length=923120 Score = 203 bits (224), Expect = 4e-47 Identities = 1036/1626 (64%), Gaps = 42/1626 (3%) Strand=Plus/Plus Query 77951 CCTCAATACTTATTCATGCGTGTTTCTATTGGTATTCATGGAAATGATATTCCAGCGGTA 78010 |||||| | ||||| ||| | || || ||||| |||||| | ||||| || | | Sbjct 447957 CCTCAACATTTATTAATGAGAGTGTCAATTGGAATTCATATAGATGATCTTGAAAAAGCT 448016 Query 78011 CTTGAAACGTATGATAAAATGTC-CAATGGTATGTTTATTCACGCAACACCTACTTTGTT 78069 | ||||| ||| || |||||| ||| ||| || | || || ||||| || || || Sbjct 448017 TTAGAAACATATCATTTAATGTCTCAAAAATAT-TTCACACATGCTACACCCACATTATT 448075 Query 78070 TAATGCAGGTACTCCCCGTCCACAGATGTCATCTTGTTTCCTACTTGCAAATAAGGAGGA 78129 |||| |||| || || || || || |||||||||||||| ||| | | | || || Sbjct 448076 TAATTCAGGAACCCCACGACCGCAAATGTCATCTTGTTTTCTATTATCTATGAAATCAGA 448135 Query 78130 CTCTATTAATGGTATATACGGGACTCTCACAGAGTGTGCTCAGATTTCTAAGTGGGCTGG 78189 |||||| | ||||||| | || | | | | |||||| |||| ||| || || Sbjct 448136 TTCTATTGAAGGTATATTTGAAACATTAAAACAATGTGCTTTGATTAGTAAAACAGCAGG 448195 Query 78190 TGGTATAGGTCTTCATATTCACGATGTTCGTGCAAACAAGTCCAGGATTAGAGGAACTAA 78249 || ||||| || | | || ||| | | | | || || |||||||||||||| Sbjct 448196 CGGCATAGGAGTTGCTGTACAAGATATAAGAGGTCAGAATTCTTATATTAGAGGAACTAA 448255 Query 78250 TGGTCAGTCTGATGGAATTATTCCTATGCTTAGGGTATTCAATGCTACAGCACGCTATGT 78309 |||| || |||| | |||| ||| | ||||| || |||| ||| ||| | ||||| Sbjct 448256 TGGTATATCAAATGGTTTAGTTCCAATGTTAAGGGTTTTTAATGATACGGCAAGGTATGT 448315 Query 78310 CAACCAAGCGGGTCG---TAGGAAGGGGTCATTCGCTATGTACCTTGAACCTTGGCACGC 78366 | |||| || | || || || || || || | || | || || ||||| | Sbjct 448316 AGATCAAGGTGGAGGGAAAAGAAAAGGATCTTTTGCAGTATATATAGAGCCATGGCATTC 448375 Query 78367 CGATGTAATGGATTTTTTGGAACTTCGTCTCAACCAGGGTGACGAGGAAGCTCGATGCAG 78426 ||| | | || ||||| || | | || || ||| | || ||| || | Sbjct 448376 AGATATTTTTGAATTTTTAGATTTAAGAAAAAATCATGGTAAAGAAGAATTAAGAGCTCG 448435 Query 78427 GGATTTATTCACTGCTATGTGGATTCCGGATCTTTTTATGAAGAGAGTTGAGGAAGGAGG 78486 |||||||| |||||| ||| | || ||| | |||||||| ||||| | ||| Sbjct 448436 AGATTTATTTTATGCTATTTGGGTACCTGATTTATTTATGAAAAGAGTAAAAGAAAATAA 448495 Query 78487 TAAATGGTCTCTTTTCTGTCCAGATAAGACTAAGGGTCTTTCAG---ATGTATACGGGGA 78543 || ||| || | | ||||| || | | || ||| || || | | || || Sbjct 448496 AAACTGGACTTTAATGTGTCCTAATGAATGTCCAGG--TTTAAGTGAATCT-TGGGGAGA 448552 Query 78544 AGAATTCGAAAAATTGTACACTAAATACGAAGAGGAAGGTCTCGCTATTAAGACAATTGA 78603 ||||| ||||| || || || ||||| ||||| ||| | | | | || ||| | Sbjct 448553 CGAATTTGAAAAGTTATATACAAAATATGAAGAAGAAAATTTAGGAAAAAAAACAGTCCT 448612 Query 78604 TGCATCTGAACTATGGAAAGCTATTATCAAAAGTCAAACAGAGACCGGCACCCCGTATAT 78663 |||| || ||||| ||||| | ||||||||| || || || || ||||| Sbjct 448613 TGCACAAGATTTATGGTTTGCTATATTACAAAGTCAAATTGAAACTGGTGTACCATATAT 448672 Query 78664 GCTATACAAAGACAGCTGTAACAGAAAGTCTAACCAAAAGAACCTAGGTGTCATCAAAAG 78723 | |||| ||||| || || || ||||| ||||| || |||| || ||| | Sbjct 448673 GTTATATAAAGATGCATGCAATTCTAAATCTAATCAAAAAAATTTAGGAACAATTAAATG 448732 Query 78724 CTCTAACCTTTGCACAGAAATTCTGGAATACACGGATAAGAATGAAACAGCTGTATGTAA 78783 |||| | || ||||| | |||||||| ||||| |||||| ||||| Sbjct 448733 TAGTAACTTATGTTGTGAAATAATTGAATACACCTCACCTGATGAAGTAGCTGTTTGTAA 448792 Query 78784 TCTAGGGTCTATCGCTCTACCAAAGTTTGTTGATCGAGAATTAAAGACATTTGATTATTC 78843 | | | || || || || || ||||||||| ||||| ||| |||| ||| | Sbjct 448793 TTTGGCTTCAATTGCATTATGTAAATTTGTTGATAGAGAAAAAAAAGAATTTAATTTTAA 448852 Query 78844 AAAGCTCCACGAAATTACAAAAATCGTAACTAAAAATTTAAATCGTGTAATTGACCGTAA 78903 ||| | | || ||||| ||||| | |||| ||||||| || | ||||| | || Sbjct 448853 AAAATTATATGATATTACTAAAATTATTACTAGAAATTTAGATAAAATTATTGAAAGAAA 448912 Query 78904 CTACTACCCAGTCGAGACTGCTAAATATTCTAATATGAAACATAGACCAATTGGTCTAGG 78963 || |||||| | | ||| || | || |||| | ||| |||| ||||| |||| Sbjct 448913 TTATTACCCAATTAAAGAAGCTGAAAAATCAAATAAAAGGCATCGACCTATTGGAATAGG 448972 Query 78964 TGTTCAAGGATTGGCAGATGTATTCA-ACTTGTGTGGTCTTCCCTTCGATTGCGAAGATT 79022 || |||||||| |||||| ||| | ||| | | | ||| | || | || || Sbjct 448973 AGTACAAGGATTAGCAGATACATTTATGCTTTTAAGAT-ATCCATATGAATCTGACGAAG 449031 Query 79023 C-AAGGACT---ATGAATGCTCATATTTTCGAGACTATTTATCATGCAGCTTTAGAA--G 79076 | || || | || || | |||||| ||||| || ||| |||| ||||||||| | Sbjct 449032 CTAAAGAATTAAATAAAAG--AATATTT--GAGACAATGTATTATGCGGCTTTAGAAATG 449087 Query 79077 CAAGTTCAGAACTTGCTGAAATTAATGGGCCTTATGAGAGTTTCGAGGGTTCACCCGCTT 79136 ||| ||| | || || | |||| || ||||| | ||||| || || Sbjct 449088 TCTGTT--GAATTAGCACAAGTACATGGTCCATATGAATCATATAAGGGTAGTCCAGCAA 449145 Query 79137 CACAAGGTCTTCTTCAACCAGATCTATGGGAAGGTGAAGCTAAATACAGTGGTCGTTACG 79196 ||||| | | ||| ||| | | |||| | || || || | | || | Sbjct 449146 GCCAAGGAATATTACAATTTGATATGT-GGAATGCAAAAGTAGAT--AATAAATATTGGG 449202 Query 79197 ATTGGGATGCAATGAGAAAGCGTGTAATGACGAAGGGTCTGAGAAACAGTCTTCTCGTAG 79256 |||||||| | | | ||| ||| | | || | ||||| ||||| ||| Sbjct 449203 ATTGGGATTTATTAAAAAAAAAAATAAGCATACATGGATTAAGAAATTCACTTCTTTTAG 449262 Query 79257 CACCAATGCCCACTGCTTCGACGGCTCAGATCCTCGGTAATAATGAGTGTTTTGAACCAT 79316 |||| ||||| || ||||| || | || || | || |||||||| | ||||||||||| Sbjct 449263 CACCTATGCCAACAGCTTCAACTTCACAAATTTTGGGAAATAATGAATCTTTTGAACCAT 449322 Query 79317 ACACTACAAACATATATCTTCGTCGCACATTAGCTGGTGAATTTGTTGTGGTTAACAAAC 79376 | || | ||||| || | | || |||| ||||||||| |||| || || | Sbjct 449323 ATACAAGTAACATTTACTATAGACGTGTATTAAGTGGTGAATTCTTTGTTGTAAATCCTC 449382 Query 79377 ATCTTGTT-GAAGAT-TTGAAGA-AGTTAGGTCTTTGGTCAAAAGAGATGA---AAGACT 79430 || ||||| ||||| || || || |||| | ||| |||| |||| || | | Sbjct 449383 AT-TTGTTAAAAGATCTTTTTGATAG--AGGTTTGTGGGATGAAGATATGAAACAACAAT 449439 Query 79431 TAA-TGGTCAAAGCCGGAGGGAGTGTGCAAAACATAGTAGAGATACCAGATAATATTAAA 79489 ||| || ||| | || ||||| ||| | || || ||||| | | | ||| Sbjct 449440 TAATTGCTCA----CAATGGAAGTGTCCAATATATTAGCGAAATACCTAACGACTTGAAA 449495 Query 79490 AATCTTTATAAGACTGTTTGGGAAATTAGCCAAAAATGTATTATCGACATGGCAGCGGAC 79549 | | ||||| |||||||||||||| | ||||| |||||| |||||||| || ||| Sbjct 449496 GAATTGTATAAAACTGTTTGGGAAATCAAGCAAAAGAATATTATTGACATGGCCGCTGAC 449555 Query 79550 AGGGGT 79555 ||||| Sbjct 449556 CGGGGT 449561 Score = 141 bits (156), Expect = 1e-28 Identities = 171/233 (73%), Gaps = 0/233 (0%) Strand=Plus/Plus Query 171857 GTAGTATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGT 171916 || ||||||| || ||||| ||||| | ||||||||||| || || || || || || Sbjct 406039 GTGGTATGCAGATTTTTGTAAAAACATTAACTGGAAAAACCATAACTCTTGATGTCGAAC 406098 Query 171917 CGTCAGACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCG 171976 | || || || || || || | ||||| || ||||||||||| ||||| ||||| || | Sbjct 406099 CATCCGATACTATTGAAAATGTTAAAGCAAAAATTCAAGATAAAGAAGGTATTCCCCCTG 406158 Query 171977 ATCAGCAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATT 172036 |||| ||| || | ||||||||||| ||||| | |||||||| | || | |||||| Sbjct 406159 ATCAACAAAGATTAATTTTTGCTGGAAAACAATTAGAAGATGGCAGAACATTATCTGATT 406218 Query 172037 ACAACGTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGGT 172089 | || ||||||| || || || |||| | ||| |||| | | |||||| Sbjct 406219 ATAATATTCAAAAAGAATCAACCTTACATTTGGTTTTAAGATTAAGAGGTGGT 406271 Score = 140 bits (154), Expect = 4e-28 Identities = 163/220 (74%), Gaps = 0/220 (0%) Strand=Plus/Plus Query 171857 GTAGTATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGT 171916 || ||||||| || ||||| ||||| | ||||||||||| || || || || || || Sbjct 406267 GTGGTATGCAGATTTTTGTAAAAACATTAACTGGAAAAACCATAACTCTTGATGTCGAAC 406326 Query 171917 CGTCAGACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCG 171976 | || || || || || || | ||||| || ||||||||||| ||||| ||||| || | Sbjct 406327 CATCCGATACTATTGAAAATGTTAAAGCAAAAATTCAAGATAAAGAAGGTATTCCCCCTG 406386 Query 171977 ATCAGCAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATT 172036 |||| ||| || | ||||||||||| ||||| | |||||||| | || | |||||| Sbjct 406387 ATCAACAAAGATTAATTTTTGCTGGAAAACAATTAGAAGATGGCAGAACATTATCTGATT 406446 Query 172037 ACAACGTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAG 172076 | || ||||||| || || || |||| | ||| |||| Sbjct 406447 ATAATATTCAAAAAGAATCAACCTTACATTTGGTTTTAAG 406486 Score = 120 bits (132), Expect = 4e-22 Identities = 147/201 (73%), Gaps = 0/201 (0%) Strand=Plus/Plus Query 171889 GGAAAAACTATCACCCTCGAGGTTGAGTCGTCAGACACAATCGATAACATCAAAGCCAAG 171948 ||||||||||| || || || || || | || || || || || || | ||||| || Sbjct 405843 GGAAAAACTATAACTCTTGATGTCGAACCATCCGATACTATTGAAAATGTTAAAGCAAAA 405902 Query 171949 ATTCAAGATAAGGAAGGCATTCCACCCGATCAGCAACGACTTATTTTTGCTGGTAAACAG 172008 ||||||||||| ||||| ||||| || ||||| ||| || | ||||||||||| ||||| Sbjct 405903 ATTCAAGATAAAGAAGGTATTCCCCCTGATCAACAAAGATTAATTTTTGCTGGAAAACAA 405962 Query 172009 CTTGAAGATGGACGTACCCTCGCTGATTACAACGTTCAAAAGGAGTCTACTCTACACCTT 172068 | |||||||| | || | ||||||| || ||||||| || || || |||| | Sbjct 405963 TTAGAAGATGGCAGAACATTATCTGATTATAATATTCAAAAAGAATCAACCTTACATTTG 406022 Query 172069 GTTCTAAGGCTTCGGGGTGGT 172089 ||| |||| | | |||||| Sbjct 406023 GTTTTAAGATTAAGAGGTGGT 406043 >seq3 Length=1724855 Score = 145 bits (160), Expect = 1e-29 Identities = 154/203 (76%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 |||||||||||||| ||||| | || |||||||| ||||| || || ||||| | || Sbjct 1545578 ATGCAAATCTTTGTAAAAACATTAACCGGAAAAACAATCACTCTTGATGTTGAACCATCC 1545519 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981 || || || || || | ||||| || ||||||||||| ||||| ||||| || || || Sbjct 1545518 GATACTATTGAAAATGTTAAAGCAAAAATTCAAGATAAAGAAGGAATTCCCCCTGACCAA 1545459 Query 171982 CAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAAC 172041 ||| |||| ||||||||||| ||||| | |||||||| | || | ||||||| || Sbjct 1545458 CAAAGACTAATTTTTGCTGGAAAACAATTAGAAGATGGCAGAACTTTATCTGATTATAAT 1545399 Query 172042 GTTCAAAAGGAGTCTACTCTACA 172064 ||||||| || || || |||| Sbjct 1545398 ATTCAAAAAGAATCAACCTTACA 1545376 >seq14 Length=1633590 Score = 120 bits (132), Expect = 4e-22 Identities = 227/330 (69%), Gaps = 12/330 (4%) Strand=Plus/Minus Query 195662 AAGATGAAGGAGACTGCGGAATCTTTCATGGGTAAAACTGTGAAAGATGCAGTTGTGACT 195721 || ||||| || ||||| ||| || | || | || || | | |||||| | ||| Sbjct 582185 AAAATGAAAGAAACTGCTGAAAATTATTTAGGAAGAAAAGTACACCAAGCAGTTATTACT 582126 Query 195722 GTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCTGCTGCTATTGCG 195781 |||||||| || || | |||||||||| | || || ||||| || |||| | ||||| Sbjct 582125 GTACCTGCATATTTTAATGATTCACAAAGGCAAGCAACAAAAGATGCTGGTAAAATTGCA 582066 Query 195782 GGTCTAAACTGTCTTA-GAATTATCAATGAACCAACAGCGGCTGCAATTGCTTATGGTCT 195840 || || | ||| ||| ||||||| ||||||||||| || ||||| | |||| |||| | Sbjct 582065 GGGCTTGA-TGTTTTAAGAATTATTAATGAACCAACTGCAGCTGCTTTAGCTTTTGGTTT 582007 Query 195841 GGACAAGAACAAGGACGAAGATAAAAATGTATTGATCTTTGATCTCGGTGGTGGTACGTT 195900 || || | | | | ||| || | || | | |||| | || || || || || Sbjct 582006 AGAAAAAAGTGATGGCAAAGTTATAGCTG------TTTATGATTTAGGAGGAGGGACATT 581953 Query 195901 TGATGTCTCACTTCT--CAATATTGAAGGTGGTATATTCGAAGTAAAGGCTACTGCTGGT 195958 |||||| ||| || | |||||| ||| ||| | || || ||||| ||||| ||| Sbjct 581952 TGATGTTTCAATTTTAGAAATATT--AGGAGGTGTTTTTGAGGTAAAAGCTACAAATGGA 581895 Query 195959 GATACTCATCTAGGTGGTGAAGATTTCGAT 195988 |||| | |||| || |||||||| ||| Sbjct 581894 AATACATCTTTAGGAGGAGAAGATTTTGAT 581865 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 657858469272160