Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmodium_20brasilianum_20[genbank_20GCA_5F001885115.2_202016-12- 01] 953 sequences; 30,089,869 total letters Query= NC_001973.1 Length=161046 Score E Sequences producing significant alignments: (Bits) Value seq60 104 2e-17 >seq60 Length=41302 Score = 104 bits (114), Expect = 2e-17 Identities = 147/207 (71%), Gaps = 0/207 (0%) Strand=Plus/Plus Query 40686 AAAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGC 40745 |||||||||||| ||||||||||| || ||||| |||||||| || | || |||||| | Sbjct 5930 AAAAATGCAAATTTTCGTAAAAACTCTAACGGGAAAAACCATTACGCTTGATGTCGAACC 5989 Query 40746 CACCGACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGA 40805 | |||| | | | | |||| |||||||| || || ||||| || || | || Sbjct 5990 ATCTGACACTATTGAGAATGTAAAGGCAAAAATTCAAGATAAGGAGGGAATTCCACCAGA 6049 Query 40806 CCAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTA 40865 ||| ||| |||| || | || || |||||||| || || | | ||| | ||||| Sbjct 6050 CCAACAAAGACTAATTTTTGCAGGAAAACAGCTAGAAGATGGAAGAACCTTATCTGACTA 6109 Query 40866 CAACATCCAGAAGGAGGCCACGCTGCA 40892 ||| || || |||||| | || |||| Sbjct 6110 CAATATTCAAAAGGAGTCTACTTTGCA 6136 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 515213062451280