Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmodium_20brasilianum_20[genbank_20GCA_5F001885115.2_202016-12- 01] 953 sequences; 30,089,869 total letters Query= NC_002686.2 Length=124784 Score E Sequences producing significant alignments: (Bits) Value seq306 181 8e-41 >seq306 Length=50732 Score = 181 bits (200), Expect = 8e-41 Identities = 310/450 (69%), Gaps = 0/450 (0%) Strand=Plus/Minus Query 20221 GATTTGGGTCCTGTGTATGGATTTCAATGGAGACATTTTGGAGCTGAATATGTTGACATG 20280 || || || ||| | ||||| ||||||||||| ||||| || ||||||||| | ||| Sbjct 47710 GACTTAGGACCTATATATGGTTTTCAATGGAGGCATTTCGGTGCTGAATATACAAATATG 47651 Query 20281 AACACAAATTATTTTGGACAAGGAGTAGATCAATTACAAAATGTTATTAATTTAATTAAA 20340 | | || ||| | ||||||| ||||||||| ||||| |||| ||||||| ||| Sbjct 47650 CATGCCAACTATGAAGATAAAGGAGTTGATCAATTAAAAAATATTATCCATTTAATAAAA 47591 Query 20341 ACGAACCCAAACGACAGAAGAATTATTTTATGCGCCTGGAACGCTAAAGATGTGCCTTTA 20400 | | |||| |||||||||||||| || || ||||| | ||||||| | | | Sbjct 47590 AATGATCCAACTAGTAGAAGAATTATTTTGTGTGCATGGAATGTTAAAGATCTTGATCAA 47531 Query 20401 ATGGCTTTGCCTCCATGTCATATGCTATGCCAATTTTACGTTGCTAATAATGAATTGTCG 20460 ||||| | ||||| |||||||| ||||||||||||| ||| | || |||| || Sbjct 47530 ATGGCACTACCTCCTTGTCATATTTTATGCCAATTTTATGTTTTTGATGGAAAATTATCA 47471 Query 20461 TGTCAAATGTATCAACGATCCGCTGATATGGGACTGGGTGTTCCTTTCAATATTGCAAGT 20520 ||| ||||||||| | || |||| | || | || || ||||| |||||||| Sbjct 47470 TGTATTATGTATCAAAGGTCATGTGATTTAGGTTTAGGAGTCCCTTTTAATATTGCCTCC 47411 Query 20521 TATGCGCTGCTTACGTATATGATTGCACATGTTACAGATTTAAAAACGGGTGACTTAGTC 20580 ||| | | | || ||||||||||||| || ||||| | | | | || | Sbjct 47410 TATTCAATATTCACTCATATGATTGCACAAGTGTGTAATTTACAGCCTGCACAGTTCATA 47351 Query 20581 CACACCATAGGAGACGCGCATATTTACCTTAATCATATAGAACCTTTAAAATTACAGTTA 20640 || | ||||| | || ||| |||| ||||||||| || |||||| |||||||| Sbjct 47350 CATATTTTAGGAAATGCACATGTTTATAATAATCATATTGACAGCTTAAAAGTACAGTTA 47291 Query 20641 ACACGACAACCAAAACAATTCCCAACTCTT 20670 | | ||| | | |||||||||||| Sbjct 47290 AATAGGATACCCTACCCCTTCCCAACTCTT 47261 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 399179363602585