Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmodium_20brasilianum_20[genbank_20GCA_5F001885115.2_202016-12- 01] 953 sequences; 30,089,869 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq361 109 9e-20 >seq361 Length=56218 Score = 109 bits (120), Expect = 9e-20 Identities = 172/244 (70%), Gaps = 2/244 (1%) Strand=Plus/Minus Query 16458 GAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGTGGAG 16517 ||||||| || ||||| || ||||| |||||||| || ||| | || | | || || | Sbjct 17069 GAGATAATATTCAAGGTATTACCAAACCAGCTATTCGACGTTTAGCAAGAAGAGGAGGTG 17010 Query 16518 TCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTCA 16577 |||| ||| |||| || || | |||||||| || | | || |||||| | ||| | Sbjct 17009 TCAAACGTATCTCCGGTTTAATATATGAAGAAATAAGAGGAGTATTGAAGGTATTCTTAG 16950 Query 16578 AGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTCACCT 16637 ||| || || | ||| | | ||||| || ||||| || | ||||| || || Sbjct 16949 AGAATGTAATAAAAGATTCAATTATGTATACTGAACACGCAAAGAGAAAGACCGTAACTG 16890 Query 16638 CCATGGATATCGTCTATGCATTGAAACGTCAAGGCCGTAAGATT-TATGGTTTTGGAAGT 16696 | |||||||| || || || ||||| | ||||| | || ||| |||||||||||| || Sbjct 16889 CTATGGATATTGTTTACTCACTGAAAAGACAAGGAAG-AACATTATATGGTTTTGGAGGT 16831 Query 16697 TAAT 16700 |||| Sbjct 16830 TAAT 16827 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79074328665429