Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmodium_20brasilianum_20[genbank_20GCA_5F001885115.2_202016-12- 01] 953 sequences; 30,089,869 total letters Query= NC_013756.1 Length=368454 Score E Sequences producing significant alignments: (Bits) Value seq60 120 7e-22 >seq60 Length=41302 Score = 120 bits (132), Expect = 7e-22 Identities = 153/210 (73%), Gaps = 3/210 (1%) Strand=Plus/Minus Query 199426 GTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTG 199485 ||| | ||| ||||||||||| | |||||||||| || || ||||||||||| ||||| Sbjct 6137 GTGCAAAGTAGACTCCTTTTGAATATTGTAGTCAGATAAGGTTCTTCCATCTTCTAGCTG 6078 Query 199486 CTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTT 199545 ||||| || || || || | || ||||| || |||||| || || ||||| || Sbjct 6077 TTTTCCTGCAAAAATTAGTCTTTGTTGGTCTGGTGGAATTCCCTCCTTATCTTGAATTTT 6018 Query 199546 TTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCGT 199605 | ||| || || | ||||| | || ||| ||||| | ||| || || || ||||| Sbjct 6017 TGCCTTTACATTCTCAATAGTGTCAGATGGTTCGACATCAAGCGTAATGGTTTTTCCCGT 5958 Query 199606 GAGAGTTTTCACAAAAATTTGGTACATTTT 199635 |||||||| || |||||||| |||||| Sbjct 5957 TAGAGTTTTTACGAAAATTTG---CATTTT 5931 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1178907204998851