Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmodium_20brasilianum_20[genbank_20GCA_5F001885115.2_202016-12- 01] 953 sequences; 30,089,869 total letters Query= NC_016072.1 Length=1259197 Score E Sequences producing significant alignments: (Bits) Value seq944 318 5e-81 seq470 246 2e-59 seq27 185 7e-41 seq288 172 4e-37 seq60 149 5e-30 seq482 147 2e-29 seq284 129 5e-24 seq9 116 3e-20 seq124 109 4e-18 seq500 104 2e-16 seq307 102 7e-16 seq573 91.5 1e-12 seq306 91.5 1e-12 seq278 89.7 4e-12 seq170 86.0 5e-11 >seq944 Length=59512 Score = 318 bits (352), Expect = 5e-81 Identities = 646/947 (68%), Gaps = 37/947 (4%) Strand=Plus/Plus Query 551790 GGAGATTCTCATCTTGGTGGCGAAGATTTTGATAATAGACTGGTATCATGGTGTGTTGAA 551849 |||||| | || | ||||| |||||||||||||| ||||| || | ||||| ||| Sbjct 12257 GGAGATACACACTTAGGTGGTGAAGATTTTGATAACAGACTAGTTAATTTCTGTGTAGAA 12316 Query 551850 GATTTTAAACGAAAAAACAAAGTT---GATCTATCTACATCTGCCAAAGCTCTTCGTCGT 551906 |||||||| ||||||| | | | ||| |||| | | | | ||| | | | Sbjct 12317 GATTTTAAGAGAAAAAATAGGGGTAAAGATTTATCAAAAAATAGTAGAGCATTAAGAAGG 12376 Query 551907 CTAAGAACTGCTTGCGAAAGAGCCAAACGAGCTCTTTCATCTGGTACTCAAACCACTATT 551966 ||||||| || ||||| |||||||| | | ||||| ||| ||| | || || Sbjct 12377 TTAAGAACACAATGTGAAAGGGCCAAACGTACGTTGTCATCCTCTACACAAGCTACCATC 12436 Query 551967 GAAGTAGATTCATTATTTGAGGGAATTGATTATAATACGCCTATTTCGAGGGCCAAATTT 552026 ||| | ||||| | ||||| || || ||||||| | | | || || | |||| Sbjct 12437 GAAATTGATTCCCTTTTTGAAGGTATAGATTATAGTGTAACAGTAAGTAGAGCAAGATTT 12496 Query 552027 GAAGATATTTGTTCTGATCTCTTT-AGAAAAACAATTGAACCAGTAGAACAAGTTTTAAG 552085 ||||| | ||| ||| || ||| || | || | | ||||||||| |||| |||| Sbjct 12497 GAAGAGTTATGTATTGA-CTATTTCAGGGATACGTTAGTACCAGTAGAGAAAGTCTTAAA 12555 Query 552086 AGATTCAAAGATTGATAAATCCAAAGTACATGAAATTGTGCTTGTTGGTGGATCTACAAG 552145 |||| | | ||| |||||| | ||||||||| |||| | |||||||| || ||| | Sbjct 12556 AGATGCTATGATGGATAAAAAAAGTGTACATGAAGTTGTTTTAGTTGGTGGTTCAACACG 12615 Query 552146 AATTCCTAAAATTCGCGAAATGTTAAGTTCTTA-----TTTCAATGGTAAAAAATTAAAT 552200 ||||||||| || | ||| |||| || | ||| || || ||| || | | Sbjct 12616 AATTCCTAAGATAC---AAACATTAA--TCAAAGAATTTTTTAACGGCAAAGAAGCATGT 12670 Query 552201 GAAAGTGTTAATCCAGATGAGGCTGTTGCCTATGGTGCCGCAATTCAAGCAGCTATTCTT 552260 | | |||| |||||||| ||||| || |||||||| ||| | |||||||| || | Sbjct 12671 AGATCTATTAACCCAGATGAAGCTGTAGCATATGGTGCAGCAGTACAAGCAGCAATATTA 12730 Query 552261 TCTGGACAAACTGATGA----AAAACTA--CAAAAT--ATTGTACTTGTAGATGT-TACT 552311 || || |||| | || || ||| || ||||| || |||||| | || Sbjct 12731 TCGGG------TGATCAGTCCAATGCTGTTCAAGATTTATTGTTATT--AGATGTATGCT 12782 Query 552312 CCTCTATCTCTTGGTTTAGAAACAGTTGGAGGTATTATGACTAATCTTATCGATAGAAAT 552371 ||| |||| | ||||||||||| | ||| ||| ||||||| || | || || |||||| Sbjct 12783 CCT-TATCCTTAGGTTTAGAAACTGCTGGTGGTGTTATGACAAAATTGATTGAAAGAAAT 12841 Query 552372 ACTACTATTCCTTGTAAAAAATCTCGTGTATTTTCTACGTATTCAGATAATCAAACTGCT 552431 || |||||||| |||||| || | ||| | |||||| | ||||| ||| | | | Sbjct 12842 ACAACTATTCCAGCAAAAAAAAGTCAAATCTTTACGACGTATGCTGATAACCAACCAGGT 12901 Query 552432 GTTACAATTCAAATTTTTGAAGGAGAAAGAAAATTCACTAAAGATAATAATCAACTTGGT 552491 || ||| ||| | | ||||||||||||| ||| || |||||||||||| | ||| Sbjct 12902 GTGTTAATCCAAGTATATGAAGGAGAAAGAGCATTAACAAAAGATAATAATTTGTTAGGT 12961 Query 552492 ACTTTTAATTTAGAAGGTATTCCTCCTGCTCCTCGTGGAGTACCGCAAATTGAAGTTACT 552551 | ||| ||||||| ||||| || ||||| ||| | |||||| |||||||||||||| Sbjct 12962 AAATTTCATTTAGATGGTATACCACCTGCCCCTAGGAAAGTACCACAAATTGAAGTTACG 13021 Query 552552 TTCGATATCGATGCCAATGGAATTTTGAATGTGACTGCTTGTGATAA-ATCTAGCAACAA 552610 || ||||| ||||| ||||||||||| ||||| || ||| ||| || | | | | || Sbjct 13022 TTTGATATAGATGCAAATGGAATTTTAAATGTTACAGCTGTTGAGAAGAGCACGGGAAAA 13081 Query 552611 GAGTAAAAATATTACTNNNNNNNATAATCGTGGTAGATTTACTGATGAACAAATTAAACG 552670 | || |||||||| || || ||||| || | |||| ||||| | || Sbjct 13082 CA-AAATCATATTACTATTACCAATGATAAGGGTAGGTTATCCCCTGAAGAAATTGATCG 13140 Query 552671 TATGGTCGAAGAAGCTAAAGAATTTGAAGAAGCTGATAATAAGAGAA 552717 |||||| | || || || ||| | ||| || ||| ||||||| Sbjct 13141 TATGGTTAATGATGCAGAAAAATATAAAGCAGAGGAT--GAAGAGAA 13185 Score = 242 bits (268), Expect = 3e-58 Identities = 383/542 (71%), Gaps = 9/542 (2%) Strand=Plus/Plus Query 549992 GCTATAGGTATAGATTTAGGAACCACATATAGTTGTGTTGGTGTTTGGCAAAATGGTAAA 550051 || || ||||| || || ||||| || || ||||||||||| ||| ||||| || Sbjct 11600 GCCATTGGTATCGACTTGGGAACAACGTACTCATGTGTTGGTGTATGGAGAAATGAAAAC 11659 Query 550052 GTTGAAATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCACG 550111 || || ||||| || || ||||| || || ||||| || ||||| |||||| | || || Sbjct 11660 GTGGACATTATAGCAAACGATCAGGGAAATAGAACAACCCCATCGTATGTTGCCTTTACT 11719 Query 550112 GAAACTGAACATTTAGTTGGTGATGCAGCAAAATATCAAGCCACTGGTAATCCTACCAAT 550171 || || || || | || ||||||||||| | |||| || | ||||| ||| Sbjct 11720 GATACAGAGAGACTAATAGGAGATGCAGCAAAGAACCAAGTTGCTAGGAATCCGGAAAAT 11779 Query 550172 ACTATTTTTGATGCTAAACGTTTAATTGGAAGAAGTTTTAATGATTCGACTGTTCAGGCA 550231 ||| | |||||||| || | ||||||||||| | |||| || || |||| || Sbjct 11780 ACTGTATTTGATGCAAAGAGATTAATTGGAAGGAAATTTACAGAATCATCTGTGCAAAGT 11839 Query 550232 GATATGAAGCATTGGCC-TTTCCAA-ATTGTTAA-TGTTTCTGGAAAACCTTATATTGAA 550288 ||||||||||||||||| ||| || | || | ||| || ||||| |||||| Sbjct 11840 GATATGAAGCATTGGCCATTTACAGTAAAGTCAGGTGTAGATGAGAAACCAATGATTGAA 11899 Query 550289 GCTACTCATGAAGGATCTGTTAAACAATT--TTCA-CCAGAACAAATTTCATCTATGGTT 550345 | ||| | |||| | || |||| |||| || ||| |||||||||| |||||| Sbjct 11900 GTTACATACCAAGGG---GAAAAGAAATTATTTCATCCCGAAGAAATTTCATCAATGGTT 11956 Query 550346 TTAATGAAAATGAAACAAACAGCCAGTGCTTTTGTTGGTCAAGAAGTTACGGATGCAGTA 550405 ||| || |||||| ||| || || ||| | ||| || | | | |||| ||| Sbjct 11957 TTACAAAAGATGAAAGAAAATGCAGAAGCATTTTTAGGTAAATCCATAAAGAATGCTGTA 12016 Query 550406 ATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGGACGT 550465 || |||||||||||||||||||| || || ||| | ||||| || |||||||| || Sbjct 12017 ATTACTGTACCAGCATATTTTAACGATTCTCAAAGACAAGCAACAAAAGATGCAGGTACC 12076 Query 550466 ATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTGCATAT 550525 ||||||||| | ||||| | | ||||| |||||||| ||||| || ||| | |||||| Sbjct 12077 ATTGCTGGATTGAATGTAATGAGAATTATTAATGAACCAACTGCAGCAGCAATAGCATAT 12136 Query 550526 GG 550527 || Sbjct 12137 GG 12138 Score = 89.7 bits (98), Expect = 4e-12 Identities = 199/294 (68%), Gaps = 15/294 (5%) Strand=Plus/Minus Query 361546 ATCTATATCTTCACCACCTAAATGTGTA-CTACCGCTAACTGCTAATGTTCTAAATAAGC 361604 ||| | ||||||||||||||| |||||| || | ||| |||| | |||| | Sbjct 12289 ATCAAAATCTTCACCACCTAAGTGTGTATCTCCTGCTGT-TGCTTTCACTTCGAATATAC 12231 Query 361605 CATTATTAATATTCATGAGACAAACATCGAGTGTTCCTGCACCTAAATCATATATGATAA 361664 ||| | ||| | | | | | ||||| | ||| ||| | |||||||| | || | || Sbjct 12230 CATCTTCAATTGTTAACAAAGATACATCAAATGTACCTCCTCCTAAATCGAAAATTAAAA 12171 Query 361665 TATTCCCCCCGTTTTTATT--TTTCCAAGTTTTACTTCCAAGACCATAAGCTAATGAAGC 361722 |||| ||||| ||||| ||||| | | |||||| |||| || || Sbjct 12170 TATT-------TTTTTCCCCCTTTCCTT-TTTTATGT---AAACCATATGCTATTGCTGC 12122 Query 361723 AGCTGTTGGTTCGTTAATTATTTTAATAACATTGAGTCCCGCTATTTTTGATGCATCTAA 361782 || |||||||| ||||| ||| | || ||||| | ||| || || | ||||||| Sbjct 12121 TGCAGTTGGTTCATTAATAATTCTCATTACATTCAATCCAGCAATGGTACCTGCATCTTT 12062 Query 361783 AGTGGCTTGACGTTGTGCATCATTAAAATATGCAGGAACAGTAATCACTGCTTT 361836 || ||||| | ||| | ||| ||||||||||| || |||||||| || || || Sbjct 12061 TGTTGCTTGTCTTTGAGAATCGTTAAAATATGCTGGTACAGTAATTACAGCATT 12008 >seq470 Length=33878 Score = 246 bits (272), Expect = 2e-59 Identities = 377/539 (70%), Gaps = 9/539 (2%) Strand=Plus/Plus Query 552015 AGGGCCAAATTTGAAGATATTTGTTCTGATCTCTTTAGAAAAACAATTGAACCAGTAGAA 552074 || || ||||||||||| | | ||| | |||||| |||| | |||||||| || Sbjct 24274 AGAGCAAAATTTGAAGAGTTAAATGATGACTTATTTAGAGAAACTTTAGAACCAGTTAAA 24333 Query 552075 CAAGTTTTAAGAGATTCAAAGATTGATAAATCCAAAGTACATGAAATTGTGCTTGTTGGT 552134 |||| ||| ||| |||| ||| ||| ||| | | ||||| || | || ||| Sbjct 24334 AAAGTATTAGATGATGCAAAATATGAAAAAAGTAAAATTGACGAAATAGTCTTAGTAGGT 24393 Query 552135 GGATCTACAAGAATTCCTAAAATTCGCGAAATGTTAAGTTCTTATTTCAATGGTAAAAAA 552194 || || ||| | || |||||||||| |||| | | || ||| ||||||||| || Sbjct 24394 GGTTCAACACGTATACCTAAAATTCAACAAATAATTAAAGATTTTTTTAATGGTAAAGAA 24453 Query 552195 TTAAATGAAAGTGTTAATCCAGATGAGGCTGTTGCCTATGGTGCCGCAATTCAAGCAGCT 552254 |||| | | ||||||||||||| ||||| || |||||||| || || ||||||| | Sbjct 24454 CCAAATAGAGGAATTAATCCAGATGAAGCTGTAGCTTATGGTGCTGCTATCCAAGCAGGT 24513 Query 552255 ATTCTTTCTGGACAAACTGATGAAAAACTACAAAATATTGTACTTGTAGATGTTACTCCT 552314 ||| ||| ||| ||| || ||||| || | || | ||||||| ||||| Sbjct 24514 ATTATTTTAGGA---------GAAGAATTACAAGATGTAGTTTTATTAGATGTAACTCCA 24564 Query 552315 CTATCTCTTGGTTTAGAAACAGTTGGAGGTATTATGACTAATCTTATCGATAGAAATACT 552374 | || | ||| | ||||| ||||| || ||||||||| | ||||| | |||||||| Sbjct 24565 TTGACTTTAGGTATTGAAACTGTTGGTGGGATTATGACTCAACTTATTAAAAGAAATACA 24624 Query 552375 ACTATTCCTTGTAAAAAATCTCGTGTATTTTCTACGTATTCAGATAATCAAACTGCTGTT 552434 ||| || |||||||| | ||||||||| ||| |||||| ||| | ||||| Sbjct 24625 GTTATACCAACAAAAAAATCACAAACATTTTCTACTTATCAAGATAACCAACCAGCTGTC 24684 Query 552435 ACAATTCAAATTTTTGAAGGAGAAAGAAAATTCACTAAAGATAATAATCAACTTGGTACT 552494 ||||||| |||||||||||||| || ||| || ||||||||| || | | || | Sbjct 24685 TTAATTCAAGTTTTTGAAGGAGAACGAGCATTAACAAAAGATAATCATTTATTAGGAAAA 24744 Query 552495 TTTAATTTAGAAGGTATTCCTCCTGCTCCTCGTGGAGTACCGCAAATTGAAGTTACTTT 552553 ||| | ||| |||||||| ||||| | | || ||||| |||||||||| || || Sbjct 24745 TTTGAATTATCTGGTATTCCACCTGCACAAAGAGGTGTACCAAAAATTGAAGTCACATT 24803 Score = 188 bits (208), Expect = 6e-42 Identities = 381/551 (69%), Gaps = 16/551 (3%) Strand=Plus/Plus Query 549994 TATAGGTATAGATTTAGGAACCACATATAGTTGTGTTGGTGTTTGGCAAAATGGTAAAGT 550053 |||||| || ||| | ||||| || ||||| ||||||||||| | ||||||| | ||| Sbjct 23403 TATAGGAATTGATCTGGGAACGACTTATAGCTGTGTTGGTGTGTTCAAAAATGGAAGAGT 23462 Query 550054 TGAAATTATTGCC-AATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCACGG 550112 ||||| |||| || || |||||| | | ||||||||| ||||| ||||| | Sbjct 23463 GGAAAT-ATTGAATAACGAGTTAGGTAATCGTATTACTCCATCCTATGTATCTTTTGTTG 23521 Query 550113 AAACTGAACATTTAGTTGGTGATGCAGCAAAATATCAAGCCACTGGTAATCCTACCAATA 550172 | ||| ||||||||| ||||| || | |||| ||| | || || | | Sbjct 23522 ATGGGGAAAGAAAAGTTGGTGAAGCAGCCAAGTTAGAAGCTACTTTACACCCAACACAGA 23581 Query 550173 CTATTTTTGATGCTAAACGTTTAATTGGAAGAAGTTTTAATGATTCGACTGTTCAGGCA- 550231 || | ||||||| || | ||||| || || | ||| ||||| || || | Sbjct 23582 CTGTGTTTGATGTAAAGAGATTAATAGGTAGGAAATTTGATGATCAAGAAGT--AGTAAA 23639 Query 550232 -GATATGAAGCATTGG--CCTTTCCAAATTGTTAATGTTTCTGGAAAACCTTATATTGAA 550288 |||| ||| |||| |||| | || || || | |||||||| ||||| | Sbjct 23640 GGATA-GAA-CATTATTACCTTATGACATAGTGAACAATGAAGGAAAACCAAATATTAGA 23697 Query 550289 GCTACTCATGAAGGATCT--GTTAAACAATTTTCACCAGAACAAATTTCATCTATGGTTT 550346 | ||| || ||||| || ||| ||| |||| ||||||||| ||||||| | Sbjct 23698 G-TACAAATAAAGGACAAAAGTACTACA-TTTGCACCTGAACAAATTAGTGCTATGGTAT 23755 Query 550347 TAATGAAAATGAAACAAACAGC-CAGTGCTTTTGTTGGTCAAGAAGTTACGGATGCAGTA 550405 || || |||||| ||| ||| || | ||||| | || || ||||| |||||||| Sbjct 23756 TAGAAAAGATGAAAGAAATAGCTCAATCCTTTT-TAGGAAAACCAGTTAAAAATGCAGTA 23814 Query 550406 ATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGGACGT 550465 | || |||||||||||||||||||| | ||| | |||||||| ||||| || ||| Sbjct 23815 GTTACAGTACCAGCATATTTTAATGATGCTCAAAGACAAGCTACAAAAGACGCAGGAACA 23874 Query 550466 ATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTGCATAT 550525 |||||||| | ||| || | |||||||| |||||||| ||||||||||| | |||||| Sbjct 23875 ATTGCTGGTTTAAATATTGTACGTATTATTAATGAACCAACTGCTGCTGCTTTAGCATAT 23934 Query 550526 GGACTTGATAA 550536 || | ||||| Sbjct 23935 GGTTTAGATAA 23945 Score = 113 bits (124), Expect = 4e-19 Identities = 213/303 (70%), Gaps = 19/303 (6%) Strand=Plus/Minus Query 361546 ATCTATATCTTCACCACCTAAATGTGTACTACC-GCTAACTGCTAATG-TTCTAAATAAG 361603 ||| | |||||| ||||||||||||||| |||| ||| ||| || ||| ||| | Sbjct 24081 ATCGAAATCTTCTCCACCTAAATGTGTATTACCTGCTGT-TGCATATACTTCGAAAACA- 24024 Query 361604 CCATTATTAATATTCATGAGACAAACATCGAGTGTTCCTGCACCTAAATCATATATGATA 361663 ||||||| |||| | | | ||||| | ||||||| ||||||| || |||| || Sbjct 24023 CCATTATCAATAACAAGAATTGATACATCAAATGTTCCTCCACCTAAGTCGTATAC--TA 23966 Query 361664 ATATTCCCCCCGTTTTTATTTTTCCAAGTTTTACTTCCAAGACCATAAGCTAATGAAGCA 361723 |||| | |||| | ||| | ||| || || |||||| ||||| | |||| Sbjct 23965 ATATACTA---GTTTCT-----TCCT--TCTTA--TCTAA-ACCATATGCTAAAGCAGCA 23919 Query 361724 GCTGTTGGTTCGTTAATTATTTTAATAACATTGAGTCCCGCTATTTTTGATGCATCTAAA 361783 || |||||||| ||||| || | || ||| | || || ||| || ||| ||| Sbjct 23918 GCAGTTGGTTCATTAATAATACGTACAATATTTAAACCAGCAATTGTTCCTGCGTCTTTT 23859 Query 361784 GTGGCTTGACGTTGTGCATCATTAAAATATGCAGGAACAGTAATCACTGCTTTTTCAACT 361843 || ||||| | ||| ||||||||||||||||| || || |||| ||||| |||| |||| Sbjct 23858 GTAGCTTGTCTTTGAGCATCATTAAAATATGCTGGTACTGTAACTACTGCATTTTTAACT 23799 Query 361844 TGT 361846 || Sbjct 23798 GGT 23796 >seq27 Length=5678 Score = 185 bits (204), Expect = 7e-41 Identities = 925/1465 (63%), Gaps = 53/1465 (4%) Strand=Plus/Plus Query 684300 TTAATGACATAATAATCTCCAGCTAAAGTACTTCTTGAATAAATATTTTCAGTAAAGGGC 684359 |||| |||| || | |||||| ||| ||||| ||||||| || |||| | || Sbjct 876 TTAACGACAAAAAATTCTCCACTCAAAACTCTTCTATAATAAATGTTACTAGTATAAGGT 935 Query 684360 TCGATGCACTCATTGTAACCCATGATTTGAGAAGTACTTGCTGTGGGCATA----CAAGT 684415 || | | | || || | || | |||||||| ||| || || |||||| ||||| Sbjct 936 TCAAAGGATTCGTTATTCCCAAGTATTTGAGATGTAGAAGCAGTTGGCATAGGTGCAAGT 995 Query 684416 AGTTGTTAAACTATTTCTAACACCATATTTTTGGATATCTATCATCAAACTATCCCAATC 684475 ||| ||| ||| || | ||||| ||| | || | | | | | |||||||| Sbjct 996 AGT----AAAGAATTCCTTAAACCATGTTTACGTATTTTGAGCTTTAGTTCATCCCAATT 1051 Query 684476 CCACATTCCACTTAATTTATCCGAGCTAAGATTCCATAAATCAAATTGGAATTTTCCTTT 684535 ||| ||||| | | | | | | ||||| | ||||||||| | | |||| Sbjct 1052 CCAGT----ACTTACTATCTACCTTTTTA--TTCCACATATCAAATTGTAGAATACCTTG 1105 Query 684536 GGAAAGAGGACTTCCTATAAATGTTTCATAAGCACCAA-ATTCTTTGGATAATTTCATTG 684594 | ||||| || | | | |||||||| ||| | || ||| ||||| ||| | Sbjct 1106 ACTAGCTGGACTACCCTGATAAGATTCATAAGGTCCATGAATCATTGC-TAATTCCATAG 1164 Query 684595 ATTCTTCCAGACAACCAAAATAAATAGTTTCAAATATTTTACGATTGAGATCGCGAGCCA 684654 | ||| | | | || | || || ||||| |||||| | | ||| | || ||| Sbjct 1165 ACATTTCTAAAGCAGCATAGTACATGGTTTCGAATATTCTTCTATTCAACTCTTTAGCTT 1224 Query 684655 ATTCAGAATCAAATGGTGTTTTAAAAATCGCAAAAACATCCGCTACTCCTTGGACACCAA 684714 || || ||| | || | | |||| | |||| ||| |||| || || ||||| | Sbjct 1225 CATCCGACTCATAGGGATATCTCAAAAGCATAAAAGTATCTGCTAACCCCTGAACACCTA 1284 Query 684715 CACCAATTGGCCTATGTTTAATATTAGATACACGTGTTTTATCAACTGGATAAAAATTAA 684774 ||| || || ||||| | | ||||| || | || | || || ||| |||| Sbjct 1285 TACCTATAGGTCTATGCCTCTTGTTAGACACTTTGGCTTCTTTAATAGGGTAATAATTTC 1344 Query 684775 TATCAATAACATTATTAAGATTTCTTGTCATAATTCCTGACACTTTCCGTAACATATCAT 684834 | ||||| | |||| |||||||| || |||||| || | || ||| | | | Sbjct 1345 TTTCAATTATTTTATCTAGATTTCTAGTAATAATTTTTGTAATTTCATATAATTTTTTAA 1404 Query 684835 AATCGAATTCTGGTACT-CCATTTTTATGTATTATGAATCTGGGAAGACATATTGATGAC 684893 ||| |||||| | | ||| | | ||| || || ||| ||| || | Sbjct 1405 AATTAAATTCTTTTTTTTCCAAGTCCACAAATT-TGCATA----AAGCAATA--GAAGCA 1457 Query 684894 AAATTACAAGTGGCATATTCATCCGCTGATGAGTATTCTACAATTTCCGAACAAAGATTT 684953 | |||||| ||| |||||| | ||| | || || | |||||| |||| | ||| Sbjct 1458 AGATTACATACAGCAACTTCATCAGGTGAAGTATACTCAATAATTTCACAACATAAATTA 1517 Query 684954 GATCCATTAATAACGCCAACATTAATTTGATTGGACTTATAATTAACAGCATCTTTAAAA 685013 | || ||| || | ||| ||||||| || ||| |||| | |||||| | Sbjct 1518 CTACATTTGATAGTACCTAGATTTTTTTGATTCGATTTAGCATTACATGAGTCTTTATAT 1577 Query 685014 ACAATATATGGTACTCCGGTTTCAATTTGTGTTTCCATAATTTTAAACCATAAATCACGA 685073 | |||||||| || || ||||||||||| ||| | || |||||||||||| | Sbjct 1578 AACATATATGGAACACCTGTTTCAATTTGACTTTGTAATATAGCAAACCATAAATCTTGT 1637 Query 685074 GCAGATA----TTTGTTTCATATATTTACCTGATTTTTCATAACTCAAATATGTTTCATT 685129 || ||| ||| || | |||||| | || |||||| | | |||| || | Sbjct 1638 GCTAATACAGTTTTTTTGCCCATATTTTC----TTCTTCATACTTAACATATAATTTTTC 1693 Query 685130 AAATTCAGTACCATATTTACCAACAATATTTGGACATTCAGATGGACACATCAAGGACCA 685189 |||||| ||| || | || | ||| |||||| ||||||||| || | ||| Sbjct 1694 AAATTCTTCACCCCATGTTTCACTTAGTCCTGGGCATTCATTTGGACACATTAAAGTCCA 1753 Query 685190 TACTCCATCTTCTCGTACTCGCTCAATAAATATATCATTNNNNNNNNNNNCTAAAAACAA 685249 | || |||| ||||| | || || | ||| | ||||||| Sbjct 1754 ATTTTGATTTTCTTTTACTCTTTTCATGAACAAGTCAGGAACCCAAACAGCATAAAACAA 1813 Query 685250 ATCTCTGGCTCTTTCAGTTTCCGCTCCTGTAttttttttAAGATCGAGGAAAAAAT---A 685306 |||||| |||||| ||| || ||||||| | | ||| | |||| | | Sbjct 1814 ATCTCTTGCTCTTAATTCTTCTTTGCCATGATTTTTTCTTAAATCTA---AAAATTCGAA 1870 Query 685307 AATATCTGCATGCCAAGGTTCAATATAAATAGCAAATGAACCAGCTCTTTTGCCTCCT-- 685364 ||||||| |||||| ||||||||||||| |||||| ||||| |||||| |||||| Sbjct 1871 TATATCTGAATGCCATGGTTCAATATAAACAGCAAAAGAACCTTTTCTTTTTCCTCCTCC 1930 Query 685365 -TGATTGGCATACCTCGATATATTATTAAATACAGTTAATACTCGTA---GACCACTTGC 685420 |||| |||| || | | ||| |||||| || |||| | ||| | ||| ||| Sbjct 1931 TTGATCTACATATCTAGCTGTATCATTAAAAACTCTTAACATAGGTACGAGTCCATTTGA 1990 Query 685421 TGTGCCTTGTGTAGAATTAATATAAGATCCATCCGCCCTAATATTTGAAACATTTACACC 685480 | || | ||| ||||||| || | | || |||| | || |||||| Sbjct 1991 AATTCCATTCGTACCTCTAATATACGAATTTTGTCCTCTTATATCTTGTACTGCTACACC 2050 Query 685481 AATTCCACCAGCATATTTACTAATCATAGCACAATCTTTCCAACAATCACCAATTGCTCC 685540 || |||||||| ||||||||| | |||||| | ||| || || || | Sbjct 2051 TATACCACCAGCTGTTTTACTAATAAGAGCACACTGTTTTAGTGTTTCGAATATACCTTC 2110 Query 685541 CATATCATCT---TTTATTCCTAAAAGGAAACAGCTTGATAATTGTTCATGAGTAGTTCC 685597 || |||| || || |||||| ||||| || | ||| || ||| || Sbjct 2111 TATTGAATCTGATTTCATAGATAAAAGAAAACAAGACGACATTTGGGGTCTAGGAGTACC 2170 Query 685598 AGCATTAAATAATGTTGGTGTTGCATGAGTAAAATAACCCTGTGACAACATTTCATAAGT 685657 || |||||||||||||||||| |||||||| ||||| || |||| || | |||||| Sbjct 2171 AGAATTAAATAATGTTGGTGTAGCATGAGTGAAATATTTTTGAGACATCAAATGATAAGT 2230 Query 685658 TTCAAATATTCTGTTTAGATCATTATTACGATAATGTATAGCAATTGCTACACGCATAAA 685717 ||| ||| | | | || ||||| | | ||||||| | || | ||| | ||| || Sbjct 2231 TTCTAATGCTTTATCTATATCATCAAT------ATGTATACCTATCGATACTCTCATTAA 2284 Query 685718 TAAATGTTGAGGTCTTTCTATGATT 685742 ||||||||| |||||||| || ||| Sbjct 2285 TAAATGTTGTGGTCTTTCAATAATT 2309 >seq288 Length=38684 Score = 172 bits (190), Expect = 4e-37 Identities = 331/488 (68%), Gaps = 15/488 (3%) Strand=Plus/Minus Query 552202 AAAGTGTTAATCCAGATGAGGCTGTTGCCTATGGTGCCGCAATTCAAGCAGCTATTCTTT 552261 ||||||| || |||||||| || ||||| | ||||| || || |||| || | || | Sbjct 5522 AAAGTGTGAACCCAGATGAAGCAGTTGCTTTAGGTGCAGCTATACAAGGAGGTGTTTT-- 5465 Query 552262 CTGGACAAACTGATGAAAAACTACAAAATATTGTACTTGTAGATGTTACTCCTCTATCTC 552321 ||| || |||| || || || | | ||| ||||||||| |||| |||| Sbjct 5464 ------AAAAGGA-GAAA---TAAAAGATTTACTTCTTTTAGATGTTATTCCTTTATCAT 5415 Query 552322 TTGGTTTAGAAACAGTTGGAGGTATTATGACTAATCTTATCGATAGAAATACTACTATTC 552381 | ||| ||||||| | || ||| | | ||||| | || |||||||||| || || | Sbjct 5414 TAGGTATAGAAACTTTAGGTGGTGTATTTACTAAATTAATTAATAGAAATACAACAATCC 5355 Query 552382 CTTGTAAAAAATCTCGTGTATTTTCTACGTATTCAGATAATCAAACTGCTGTTACAATTC 552441 | || ||||| | ||||||| || | | ||||| ||||| |||| ||| Sbjct 5354 CAACAAAGAAATCGCAAATATTTTCCACAGCTGCCGATAACCAAACACAAGTTAGTATTA 5295 Query 552442 AAATTTTTGAAGGAGAAAGAAAATTCACTAAAGATAATAATCAACTTGGTACTTTTAATT 552501 || ||| | ||||||||||| || | ||| |||||||| | || ||||| ||| Sbjct 5294 AAGTTTATCAAGGAGAAAGAGAAATGGCTAGTGATAATAAAATGTTAGGCTCTTTTGATT 5235 Query 552502 TAGAAGGTATTCCTCCTGCTCCTCGTGGAGTACCGCAAATTGAAGTTACTTTCGATATCG 552561 ||| |||||||| ||||| ||| | || || || |||||||||||||| |||||| | | Sbjct 5234 TAGTTGGTATTCCACCTGCACCTAGAGGTGTTCCACAAATTGAAGTTACATTCGATGTTG 5175 Query 552562 ATGCCAATGGAATTTTGAATGTGACTGCTTGTGATAAATCTAGCAACAAGAGTAAAAATA 552621 |||| |||| |||| | || | | ||| ||||||| | || || | || | | Sbjct 5174 ATGCTAATGCAATTATTAACATATCCGCTATTGATAAAATGACAAATAAAAAACAACAAA 5115 Query 552622 TTACTNNNNNNNATAATCGTGGTAGATTTACTGATGAACAAATTAAACGTATGGTCGAAG 552681 ||||| | | | ||||| | || | | | ||| ||||| || ||||| ||| Sbjct 5114 TTACT---ATTCAAAGTAGTGGTGGTTTGAGTAAAGAAGAAATTGAAAAGATGGTTCAAG 5058 Query 552682 AAGCTAAA 552689 ||||| || Sbjct 5057 AAGCTGAA 5050 Score = 95.1 bits (104), Expect = 1e-13 Identities = 101/131 (77%), Gaps = 2/131 (2%) Strand=Plus/Plus Query 361706 CCATAAGCTAATGAAGCAGCTGTTGGTTCGTTAATTATT-TTAATAACATTGAGTCCCGC 361764 ||| | ||||| | ||| ||||||||||||||||| ||| ||||| |||| | || || Sbjct 6056 CCAAATGCTAAAGCAGCTGCTGTTGGTTCGTTAATAATTCTTAAT-ACATCTAAACCTGC 6114 Query 361765 TATTTTTGATGCATCTAAAGTGGCTTGACGTTGTGCATCATTAAAATATGCAGGAACAGT 361824 ||||| ||||||| || ||||| | ||| | ||||||||||||||| || || || Sbjct 6115 AATTTTACCTGCATCTTTTGTTGCTTGTCTTTGAGAATCATTAAAATATGCTGGTACTGT 6174 Query 361825 AATCACTGCTT 361835 ||| || |||| Sbjct 6175 AATAACAGCTT 6185 >seq60 Length=41302 Score = 149 bits (164), Expect = 5e-30 Identities = 145/184 (79%), Gaps = 2/184 (1%) Strand=Plus/Minus Query 563292 AATATTGTAATCAGCTAGAGTTCTTGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCT 563351 ||||||||| |||| || |||||| |||||| || |||||||| |||||||| ||||| Sbjct 6116 AATATTGTAGTCAGATAAGGTTCTTCCATCTTCTAGCTGTTTTCCTGCAAAAATTAGTCT 6057 Query 563352 TTGCTGATCAGGAGGAATTCCTTCTTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGT 563411 ||| || || || |||||||| || ||||||||||||||| ||||| |||||| || Sbjct 6056 TTGTTGGTCTGGTGGAATTCCCTCCTTATCTTGAATTTTTGCCTTTACATTCTCAATAGT 5997 Query 563412 ATCAG-TGTGAGTACATTCGAGAGTAACAGTTTTACCAGTAAGAGTTTTAACGAAAATTT 563470 |||| || ||| || || |||| ||||| || || |||||||| |||||||||| Sbjct 5996 GTCAGATGGTTCGACA-TCAAGCGTAATGGTTTTTCCCGTTAGAGTTTTTACGAAAATTT 5938 Query 563471 GCAT 563474 |||| Sbjct 5937 GCAT 5934 >seq482 Length=85298 Score = 147 bits (162), Expect = 2e-29 Identities = 350/518 (68%), Gaps = 21/518 (4%) Strand=Plus/Plus Query 428095 TGAATAACCGGTTCCAATTCCTTCTGTACCATTTACAAGAATCATTGGAATGACTGGTGC 428154 |||||| || ||||| |||||||| |||||| || || || |||| || || ||| Sbjct 10582 TGAATATCCTGTTCCTATTCCTTCACAACCATTCACCAGTATAGTTGGTATAACAGGTAT 10641 Query 428155 ATAATATTGTGGTTCAATCATTTTATTATCTTCATATTGTAAA---TGTAAAATATCAAA 428211 ||||||||||||||| ||||| | | |||| | | |||| | ||| ||| | Sbjct 10642 ATAATATTGTGGTTC---TATTTTTTGACCTTCTTCGTTTAAATATTTTAATATAGGATC 10698 Query 428212 ATCATGCTCGATAAATAt-ttttttAGCCAATTCATCAAGTTGTGTAAAGATATATCTTG 428270 ||||| || ||||||| || || | || | ||| ||| ||||| ||||| || | Sbjct 10699 ATCATATTCATTAAATATACTTCTTGTCGAACTAGCCAATTTG-GTAAAAATATACCTAG 10757 Query 428271 CGCTTGCGGAATCTTTACCTCCTGACATTCTAGTTCCAAATTGTCCATTAGGCATCAATA 428330 | || | |||||| ||||| ||||| | |||||||||||| || || | Sbjct 10758 CTGCTGATGCATCTTTTCCTCCCTCTTTTCTACTACCAAATTGTCCACATGGTTCTAAAA 10817 Query 428331 AATTAATATTATTACTTCCCACATAATTTTGGGCCATATTAACAATGGTACTAGT-TAAG 428389 | ||||||||||| ||| ||| | |||| ||||| |||| |||||| || | ||| Sbjct 10818 AGTTAATATTATTTGATCCTACAAATGTTTGTGCCATGTTAATAATGGT-CTGTTGTAAT 10876 Query 428390 GATTGTTCACCATGATGATAT----TTAGTTCTTTTTGAAACTGCACCTTGTAATTCTGA 428445 || || |||||||||||| | | ||| | | | | || | ||||| || Sbjct 10877 GAAGACTCTCCATGATGATATGCACTATGCTCTGCTATATA-TCCAAC---TAATTGTGC 10932 Query 428446 TACCTTTATTTCTTCTTTATAAATACCTTCTTCTACTGATCCATAAAATACTTTGCGTTG 428505 ||| || ||| | ||| ||||| ||| | || | ||||| | |||||| | ||| Sbjct 10933 TACTTTACATTCAT-TTTTTAAATTTCTTTTAAAAC--AGCCATATAGTACTTTTCTTTG 10989 Query 428506 TGATGGTTTGAATCCATCCATAATATTAGGTATAGATCTTAAATTATCATCCACTGAGAA 428565 ||||| ||||||||||||| || |||||| |||| |||||| ||| | Sbjct 10990 ACCAGGTTTCCATCCATCCATAATGTTCGGTATACTTCTTTCTGTATCATATCTTGAATA 11049 Query 428566 TGATATTAGTTCTTGATGAATGAAATCATAATATGATA 428603 | |||| ||||| || | ||||| |||||||||| Sbjct 11050 ATAAATTAATTCTTTATTTACAAAATCGTAATATGATA 11087 Score = 109 bits (120), Expect = 4e-18 Identities = 220/321 (69%), Gaps = 28/321 (9%) Strand=Plus/Plus Query 430244 ATATTCGCTAATTTTGCTCCGAATCCATTTTTACCACCAACAAtttttttttCACCTTTA 430303 ||||| | |||||||||||| ||||||||| | || ||| |||| | ||| | | | Sbjct 12812 ATATTTGTTAATTTTGCTCCAAATCCATTTCTGCCTCCAGTAATTCGATCTTCTGCATCA 12871 Query 430304 TCATAATTAGTGGATGTTAATAGTTCTCCAAAAATCATCGATG-GTACCAT-GATTTTAT 430361 ||||||||| |||||||| | ||| ||||||||||| ||| | | ||| || || Sbjct 12872 TCATAATTATCCGATGTTAACAATTCCCCAAAAATCAT--ATGAGGAACATATATATTCA 12929 Query 430362 GTTCTTTATGCTCGACGACATCAATACCATCACCATTATTCCAAACACTAATTTCTCCAG 430421 ||||||||| | || ||||| ||||||| ||| | ||||| |||| | Sbjct 12930 TTTCTTTATGTATTTCTACTGGTATACCTTCACCATCATTATATACACTTATTTTTTTCT 12989 Query 430422 ATTCTTCATTGATGTCGACTTTTA------TCATA------TTAC----ATGATTTGC-- 430463 ||||| ||| || || | ||||| ||||| | || | ||| | Sbjct 12990 GTTCTTTATTTATTTCTATTTTTATACAAGTCATAGGGTTGTCACTCTTCGGCTTTTCCC 13049 Query 430464 -ATCTTTTACTATGATCCGCTGAATTTACAAGAACTTCATCATATATTTTATAAAGTCCT 430522 | ||||||| ||| |||| |||||||| || |||||| |||||||||| | ||| Sbjct 13050 TAGCTTTTAC----ATCTGCTGCATTTACAATAATTTCATCGAATATTTTATATAACCCT 13105 Query 430523 GGTACATAAGATAT-TTCTTT 430542 |||||||| | ||| |||||| Sbjct 13106 GGTACATATGTTATATTCTTT 13126 >seq284 Length=60150 Score = 129 bits (142), Expect = 5e-24 Identities = 369/552 (67%), Gaps = 39/552 (7%) Strand=Plus/Minus Query 368584 GATTGGTGTATTTCAAGAAGTAGGTTTTGGGGAACTCCAATTCCAGTATGGAAATCTGAT 368643 |||||||||||| || | |||| |||||| || ||| | ||| | ||| | ||| Sbjct 25809 GATTGGTGTATTAGTAGGAACAGGTATTGGGGTACACCATTACCATTGTGG---TGTGAC 25753 Query 368644 GAT--GGTGAAGAA-ATTGTTTGTATAGGTTCAATTAAAGAATTGCAAGAATTATCTGGT 368700 || | || | | ||| | ||||| || || || |||| |||| |||||||| Sbjct 25752 GAAAAGATGGAAACGATTATATGTATTGGAAGTATAAAGCAATTAGAAGAGTTATCTGGA 25693 Query 368701 GTGCAAAATATTAGTGATTTACATATTGATAAAATTGATCACATTAAAATT--CCATCAA 368758 || |||| |||| ||||||||||| || | || ||| | ||| ||||| ||| | Sbjct 25692 GTAAAAAACATTACTGATTTACATAGACATCATATAGATAAGATTGAAATTGATAATCCA 25633 Query 368759 AGAAAGGAAAAGGTTT------ATTGTCTCGAGTTGAAGGAGTTTTGGATTGCTGGTTTG 368812 |||||||| ||| | || || | | || ||| || || || ||||||| Sbjct 25632 --AAAGGAAAGCATTTACCAAAACTGAAGAGAATAGCAGAAGTATTTGACTGTTGGTTTG 25575 Query 368813 AATCAGGTTCTATGCCTTATGGTCAAATACATTATCCATTTGATAACGCAAAATACTTTG 368872 || ||||||||||| | || || | || ||||||||| || ||||| | | Sbjct 25574 AAAGTGGTTCTATGCCCTTTGCAAAAGTTCACTATCCATTTAGTA---CAAAAAA---AG 25521 Query 368873 ATAAT---GATAAAGATTATGTGGCTGATTTTGTAACAGAATCAATTGATCAAACACGTG 368929 | | | || ||| || | ||||||||| | ||||| | | |||||||| | | Sbjct 25520 AAAGTCTAGAAAAAATTTTTCCAGCTGATTTTATTGCAGAAGGATTAGATCAAACGAGGG 25461 Query 368930 GTTGGTTTTATACCCTATTAGTATTATCCACAGCTATT-TTCGATAAACCGGCTTTTAAA 368988 | ||||| ||||| || || || || ||| ||||| || |||||| | ||| ||| Sbjct 25460 GATGGTTCTATACTCTTTTGGTTGTAAGCAC-TCTATTATTTGATAAAGCTCCTTACAAA 25402 Query 368989 AATGTAATA-GTAACTGGTATTGTTAATGCATCTGATGGTCAAAAGAT--GTCAAAAAGT 369045 ||| ||||| ||||| ||| ||||| ||||| ||||| |||| || || ||| | | Sbjct 25401 AATTTAATATGTAAC-GGTCTTGTTCTAGCATCAGATGGGAAAAAAATGAGTAAAAGATT 25343 Query 369046 AAGGGTAATTATTCCGATCC---TAATATTTTAATTGATAAATTTGGTGCTGATACTTTG 369102 || |||||| | ||||| | ||||| || |||||| ||| || || | ||| Sbjct 25342 AA--AAAATTATCCTGATCCCGTTTATATT---CTTAATAAATATGGAGCGGACAGCTTG 25288 Query 369103 AGATTATACCTA 369114 ||| | ||| || Sbjct 25287 AGACTGTACTTA 25276 Score = 118 bits (130), Expect = 9e-21 Identities = 309/458 (67%), Gaps = 24/458 (5%) Strand=Plus/Minus Query 367267 GATGGACCTCCATTTGCCACAGG--TACAATGCATTATGGTCATATTTTAGTATCATCTA 367324 ||||| ||||||||||| ||||| ||| | || ||||||||| ||| || || || Sbjct 27297 GATGGTCCTCCATTTGCTACAGGACTACCA--CACTATGGTCAT---TTACTAGCAGGTA 27243 Query 367325 TTAAAGACACCATAATTAGATATTTTACCATGA--AGGGTTACAAA---GTTGATAGAAG 367379 | || | | || | || | ||| || | || || || | ||||| ||||| Sbjct 27242 T--AATAAAAGATTGTGTGACAAGATACAATTATCAGTGTAACTATTATGTTGAAAGAAG 27185 Query 367380 AAATTCTTGGGATTGTCATGGAGTTCCAATTGAA-ATGT--TAGCTAAA-AAAGTAATCG 367435 | | ||||| || ||||| | || |||||| ||| ||| ||| ||| |||| Sbjct 27184 ATTTGGATGGGACTGCCATGGGTTACCTATTGAATATGAAATAGAAAAAGAAAATAAT-- 27127 Query 367436 GATACACAACAAAGAAAGAATTATATGATTATGGAATTAATAATCATAATGATATTTGTC 367495 ||| | || ||||| || ||| | | || || || ||||||| | |||| Sbjct 27126 -ATAAATAAAAAAGAGGATATCATAAAAATG-GGTATAGATGTATATAATGAAAAATGTC 27069 Query 367496 GTAATTTGGTTTTAAAATGTGCTGATCGCTGGTATCAAGATTTT-GAACGTATTGGAAGA 367554 | ||| | |||||||||| | | || ||| || || | | | ||| | || |||||| Sbjct 27068 GAAATATAGTTTTAAAATATTCAAATGAATGG-ATAAAAACTGTAGAAAGAATAGGAAGA 27010 Query 367555 TGGATTGACGTAAAAAATGAATATAAAACAATGGATACTAATTTCATGGAATCTGTTATT 367614 |||||||| | |||||||| |||||||| |||||||||| ||| |||||| |||| Sbjct 27009 TGGATTGATTTTAAAAATGATTATAAAACTATGGATACTACTTTTATGGAAAGTGTTTGG 26950 Query 367615 TGGGCATTTAAACAATTATACGAACGCGGTATGATTTTTGAAGGTTATAAAGTAATGCCA 367674 |||| |||| ||||||| || | || | || | | || || |||||| |||||| Sbjct 26949 TGGGTTTTTAGTGAATTATATAAAAGAGGCTTTATATATAAATCTTTTAAAGTTATGCCA 26890 Query 367675 TATTCAACTGGTTGTAATACTGCTTTGTCACATTTTGA 367712 ||||| | |||||||| | | || ||||||| Sbjct 26889 TATTCTTGTAAATGTAATACACCCATATCTAATTTTGA 26852 >seq9 Length=147692 Score = 116 bits (128), Expect = 3e-20 Identities = 131/172 (76%), Gaps = 4/172 (2%) Strand=Plus/Plus Query 930664 TTGATTTTTCTTCACCAAATATTGCCAAAGAAATGCATATTGGACATTTGCGTTCTACCA 930723 ||||||||||||| |||||||| ||||||||||||||| | || ||||| | || || | Sbjct 29379 TTGATTTTTCTTCTCCAAATATAGCCAAAGAAATGCATGTAGGTCATTTAAGATCAACTA 29438 Query 930724 TTATTGGAGAATCTTTATGTAGATTATATGAATATTGTGGAAGTAAAGTTC--ATCGAGT 930781 | || || || | |||||||| | | || | || | | || || | | | || | Sbjct 29439 TAATAGGTGATAGTATATGTAGAATTTTCGAGT-TTTTAAATGTTAA-TACGAAAAGAAT 29496 Query 930782 CAATCATATTGGTGATTGGGGAACACAATTTGGTATGTTAATTGCTTATATA 930833 |||||||||||||||||||||||||||||||| ||| |||| ||||||| Sbjct 29497 AAATCATATTGGTGATTGGGGAACACAATTTGGAATGATAATAAATTATATA 29548 >seq124 Length=28153 Score = 109 bits (120), Expect = 4e-18 Identities = 151/207 (73%), Gaps = 6/207 (3%) Strand=Plus/Plus Query 563272 TGAAGGGT--ACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCTTGAATCTTCAAGTT 563329 || ||||| ||| | |||| ||| |||||||| | | |||||| |||||| | || Sbjct 11333 TGTAGGGTTGACTCTTTTTG--AATGTTGTAATCCGACAATGTTCTTCCATCTTCTAATT 11390 Query 563330 GTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCTTTATCTTGAATTT 563389 ||||||| ||||| || | ||| || |||||||| ||||||||||| || ||||| |||| Sbjct 11391 GTTTTCCTGCAAATATTAATCTCTGTTGATCAGGTGGAATTCCTTCCTTGTCTTGTATTT 11450 Query 563390 TTTGTTTTACTGCCTCAATTGTATCAG-TGTGAGTACATTCGAGAGTAACAGTTTTACCA 563448 | || || |||||| ||||| | || ||| || ||||| | ||||| || Sbjct 11451 TAGCCTTAACATTCTCAATGGTATCTGATGGCTCAACA-TCAAGAGTTATTGTTTTTCCT 11509 Query 563449 GTAAGAGTTTTAACGAAAATTTGCATA 563475 || | ||||| || || ||||||||| Sbjct 11510 GTTAATGTTTTTACAAAGATTTGCATA 11536 Score = 109 bits (120), Expect = 4e-18 Identities = 148/203 (73%), Gaps = 4/203 (2%) Strand=Plus/Plus Query 563274 AAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCTTGAATCTTCAAGTTGTTT 563333 ||| | ||| | |||| ||| ||||| || | || ||||| |||||| | |||||| Sbjct 11565 AAGTGGACTCTTTTTG--AATGTTGTAGTCTGATAATGTTCTACCATCTTCTAATTGTTT 11622 Query 563334 TCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCTTTATCTTGAATTTTTTG 563393 ||| ||||| || | ||| || |||||||| ||||||||||| || |||||||||||| Sbjct 11623 TCCTGCAAATATTAATCTCTGTTGATCAGGTGGAATTCCTTCCTTGTCTTGAATTTTTGC 11682 Query 563394 TTTTACTGCCTCAATTGTATCAG-TGTGAGTACATTCGAGAGTAACAGTTTTACCAGTAA 563452 || || |||||| ||||| | || ||| || || || | ||||| || || | Sbjct 11683 CTTAACATTCTCAATGGTATCTGATGGCTCAACA-TCAAGTGTTATTGTTTTTCCTGTTA 11741 Query 563453 GAGTTTTAACGAAAATTTGCATA 563475 ||||| || || ||||||||| Sbjct 11742 ATGTTTTTACAAAGATTTGCATA 11764 Score = 107 bits (118), Expect = 2e-17 Identities = 109/141 (77%), Gaps = 2/141 (1%) Strand=Plus/Plus Query 563274 AAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCTTGAATCTTCAAGTTGTTT 563333 ||| | ||| | |||| ||| |||||||| | | |||||| |||||| | |||||| Sbjct 11793 AAGTGGACTCTTTTTG--AATGTTGTAATCCGACAATGTTCTTCCATCTTCTAATTGTTT 11850 Query 563334 TCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCTTTATCTTGAATTTTTTG 563393 ||| ||||| || | ||| || |||||||| ||||||||||| ||||||||||||||| Sbjct 11851 TCCCGCAAATATTAATCTCTGTTGATCAGGTGGAATTCCTTCCTTATCTTGAATTTTTGC 11910 Query 563394 TTTTACTGCCTCAATTGTATC 563414 || || |||||| ||||| Sbjct 11911 CTTAACATTCTCAATAGTATC 11931 >seq500 Length=6314 Score = 104 bits (114), Expect = 2e-16 Identities = 292/446 (65%), Gaps = 28/446 (6%) Strand=Plus/Minus Query 1047049 GCTGATTGGTTTGCACAAATGAATCATAAAATGGGAGGTGATTTAGAAAAAATTAGAGAT 1047108 || ||||||||||| || | ||| | |||||| ||| || || ||||||| | | | Sbjct 2264 GCCGATTGGTTTGCTCAGTTAAATAACAAAATGTCAGGGGACTTGAAAAAAATAAAAAAA 2205 Query 1047109 GTGGGTAAATATTTCATTGAAGTATTTAAAGCATGTGGTATTAATATGT--CTGGCACTA 1047166 || || || || || |||||||| | ||| |||||||| |||||| | | || Sbjct 2204 GTAGGAAATTACTTTATTGAAGTTTGGAAAAGCTGTGGTATGAATATGGAACATGTAC-- 2147 Query 1047167 AATTTATCTGGGCTAGTGAATTTTTTAATGATAATGCTACAAAATATTTTGAAAGAATGT 1047226 ||||| | |||||||| || | || | || || | | |||| | | Sbjct 2146 AATTTTTGTGGGCTAGCGATGAAATAAACAAAAAAGCAAATGAGTATTGGTCA------T 2093 Query 1047227 TACATATTGCTA-ATCAGACATCTTTAGCAC-----GTGCTAAAAGATGTTGTCAAATTA 1047280 || ||||| || ||| | | ||||| | | |||||||||| |||| | Sbjct 2092 TAGTTATTGATATATCGAAAAGCTTTAATATTAATAGAATAAAAAGATGTTTAAAAATAA 2033 Query 1047281 TGGGACGTAGAGAAGGTGATGAATTATCTTCGTCACAAATTATATATCCTTGTATGCAAG 1047340 |||| | || ||||| || ||| | || ||||||||| |||| || ||||||||| Sbjct 2032 TGGGTAGAAGTGAAGGAGAAGAAAATTATTGTTCACAAATTTTATACCCATGTATGCAAT 1973 Query 1047341 TAGCAGATATTTTTGAATTAAATCCAAATGGAATTGATATTTGTCAACTTGGTGTTGATC 1047400 || ||||| ||| |||||| ||||||| ||||| | || |||| Sbjct 1972 GTGCTGATATATTTTTTTTAAATG---------TTGATATCTGTCAGTTAGGCACAGATC 1922 Query 1047401 AAAGAAAAGTTAATATGTTAGCCATTGAATATGCTAAACGTAATAATTT---AAAAACAC 1047457 | |||||||| ||||||||||| |||||| | | ||| || | ||||| || Sbjct 1921 AGAGAAAAGTAAATATGTTAGCACGAGAATATTGTGATATTAAAAAAATAAAAAAAAAAC 1862 Query 1047458 CAATTATTTTATCTCACCATATGTTA 1047483 | ||||||||||| || | |||||| Sbjct 1861 CTATTATTTTATCACATGAAATGTTA 1836 >seq307 Length=108794 Score = 102 bits (112), Expect = 7e-16 Identities = 134/186 (72%), Gaps = 0/186 (0%) Strand=Plus/Minus Query 390811 ATACCATTATCACCATATACACATTGAATTAATTTGTCATTGGCATTTCTTACGGTACCA 390870 || |||| || ||||||| | ||||||| | | ||| | ||||| || || | | Sbjct 8723 ATTCCATCTTCTCCATATAAAAATTGAATAATATCACCATATGAGTTTCTGACAGTTCGA 8664 Query 390871 TCATACTCTACTTTAATGTCTTCTAACATTTTAACTAATTTTCTTTGGATATAACCAGTG 390930 ||||| | ||| ||| || || | ||||| ||| | ||||| ||||||||||| Sbjct 8663 TCATATTGTACCATAACATCCTCCATAGCTTTAATTAACCTCCTTTGTATATAACCAGTT 8604 Query 390931 TCTGCAGTTTTAATTGCAGTATTAATAATACCTTCTCTTCCTGCCATAACTTGGAAGAAA 390990 || | |||||| |||||| | |||||||||||||| || ||||| | ||||||||| Sbjct 8603 TCGGATGTTTTACATGCAGTGTCTATAATACCTTCTCTACCACCCATAGCATGGAAGAAA 8544 Query 390991 AATTCC 390996 | |||| Sbjct 8543 ACTTCC 8538 >seq573 Length=13545 Score = 91.5 bits (100), Expect = 1e-12 Identities = 192/280 (69%), Gaps = 10/280 (4%) Strand=Plus/Minus Query 390889 TCTTCTAACATTTTAACTAATTTTCTTTGGATATAACCAGTGTCTGCAGTTTTAATTGCA 390948 |||||||| ||| | |||| ||||||| || || ||||| || ||||| || | ||| Sbjct 5437 TCTTCTAAAGCTTTCATTAATCTTCTTTGCATGTACCCAGTTTCGGCAGTCTTCACAGCA 5378 Query 390949 GTATTAA-TAATACCTTCTCTTCCTGCCATAACTTGGAAGAAAAATTCCATAGGATTGAG 391007 || | | |||| |||||||| || | ||| || || || ||||| | |||||||| Sbjct 5377 GTGTCGACTAAT-CCTTCTCTACCAGACATGGTATGAAAAAAGAATTCGGTTGGATTGAG 5319 Query 391008 TCCAG-AAATAAATGATCCAAAACAAAATCCT---CTTGCAGAAGGACTATCATCATGTT 391063 ||||| | | ||| || ||| ||||||| ||| ||||| || || | | Sbjct 5318 TCCAGTATAGAAAGAATTTTGAAC-AAATCCTCTACTTTCAGAATCTTTACAATGAAAAT 5260 Query 391064 GTGCAAACATAGGTAATGTTCTATTATTAAATCTTTTTTGAATTCGTTTATCTTCGACAA 391123 | ||| ||||||||||||||| |||||| ||||| |||| || | | | ||| Sbjct 5259 G---AAAATGGGGTAATGTTCTATTAATAAATCCATTTTGTATTCTTTGACCAGCTACAT 5203 Query 391124 TAACTTGTCCAATACATCCTGCAATCTGTGCAGCATTCAT 391163 | |||||||| ||| || || |||||| ||| || Sbjct 5202 TTTGTTGTCCAACACACGCTATCATTTGTGCAATATTAAT 5163 >seq306 Length=50732 Score = 91.5 bits (100), Expect = 1e-12 Identities = 138/194 (71%), Gaps = 2/194 (1%) Strand=Plus/Plus Query 399564 ATATAATATGACAAGGAGGTAATGCCAtttttttAATGTCGACAGGATTCCATAAACTTA 399623 ||| ||||||||||||||||| |||||||| | || || | ||||||| || | Sbjct 47503 ATAAAATATGACAAGGAGGTAGTGCCATTTGATCAAGATCTTTAACATTCCATGCACACA 47562 Query 399624 TAATTATTCTGCGATCATTTGGATTATTCATAATAGCATCAATACAATTATTTAATTGAT 399683 ||| ||||| | | | |||||| ||| | || || ||| ||| |||||||||| Sbjct 47563 AAATAATTCTTCTACTAGTTGGATCATTTTTTATTAAATGGATAATATTTTTTAATTGAT 47622 Query 399684 CAATTCCTTGATCATGATAATCTGTTTTACA-ATTATCATATTTGGCTCCGAAATGTCTC 399742 ||| ||||| ||| | ||| | || | || ||| ||||| || |||||||| ||| Sbjct 47623 CAACTCCTTTATCTTCATAGT-TGGCATGCATATTTGTATATTCAGCACCGAAATGCCTC 47681 Query 399743 ATTTGAAATCCATA 399756 |||||| ||||| Sbjct 47682 CATTGAAAACCATA 47695 >seq278 Length=39277 Score = 89.7 bits (98), Expect = 4e-12 Identities = 176/258 (68%), Gaps = 7/258 (3%) Strand=Plus/Plus Query 722921 TGCCATGGATTGAAAAATATAGACCCAGAAAGCTAAAAGATTTTGTACAATCACAAAATT 722980 |||||||| | ||||| || ||||||| ||||||| | || | || || | |||| Sbjct 24918 TGCCATGGGTGGAAAAGTACAGACCCAAAAAGCTAGATGACATAGTTCACCAAACAAATG 24977 Query 722981 TAATAAACTTATTTAAAAA--TAGTACCGCCAAAGGAGAAATGACACATTTTTTATTTTA 723038 |||| | | ||| | ||||| |||| | | ||| | ||||| | || | Sbjct 24978 CAATATCTATGCTGAAAGAAGTAGTAAGAACAAA--AAATATGCCTCATTTAATTTTCCA 25035 Query 723039 TGGACCTCCTGGTACCGGAAAAACATCGGTAATATTAGCAATGGGTAGAGAAATATTT-- 723096 ||| || ||||| || || |||||||| | |||| ||| | | ||| ||||| Sbjct 25036 TGGCCCACCTGGAACAGGCAAAACATCAGCAATAAATGCATTAGCACATGAACTATTTGG 25095 Query 723097 -AAAGAACATTTTACCACACGAGTAATTGAATTTAATGCTTCAGATGATAGAGGTATTAA 723155 || || || | | ||| ||| | ||||| ||||| ||||||||||||||||| || Sbjct 25096 TAAGGATAATATAAGTGAACGTGTATTAGAATTGAATGCATCAGATGATAGAGGTATAAA 25155 Query 723156 TGCCGTAAGAGAAAAAAT 723173 | |||||||||||||| Sbjct 25156 CGTAGTAAGAGAAAAAAT 25173 >seq170 Length=19265 Score = 86.0 bits (94), Expect = 5e-11 Identities = 101/137 (74%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 550400 GCAGTAATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCT 550459 ||||| || || || || ||||| |||||||| || || | || |||| | | |||| Sbjct 16275 GCAGTTATTACAGTTCCTGCATACTTTAATGATTCTCAGAGAAAATCTACCACAATTGCT 16216 Query 550460 GGACGTATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTT 550519 |||| || || || ||| | || | | || | ||||||||||||||||| || ||| Sbjct 16215 GGACAGATAGCAGGGCTTGAGGTAGTAAGAATAGTTAATGAACCTACTGCTGCAGCTCTT 16156 Query 550520 GCATATGGACTTGATAA 550536 ||||||||| | ||||| Sbjct 16155 GCATATGGATTAGATAA 16139 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 4029245601061970