Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmodium_20brasilianum_20[genbank_20GCA_5F001885115.2_202016-12- 01] 953 sequences; 30,089,869 total letters Query= NC_020864.1 Length=205622 Score E Sequences producing significant alignments: (Bits) Value seq944 538 5e-148 seq27 226 4e-54 seq470 185 1e-41 seq60 165 1e-35 seq124 163 4e-35 seq288 114 2e-20 seq392 107 3e-18 >seq944 Length=59512 Score = 538 bits (596), Expect = 5e-148 Identities = 1109/1632 (68%), Gaps = 23/1632 (1%) Strand=Plus/Plus Query 195299 GCTATTGGTATCGATTTAGGAACTACTTACTCATGTGTTGGTGTATGGCAAAATGATCGT 195358 || ||||||||||| || ||||| || ||||||||||||||||||||| |||||| Sbjct 11600 GCCATTGGTATCGACTTGGGAACAACGTACTCATGTGTTGGTGTATGGAGAAATGAAAAC 11659 Query 195359 GTAGAGATTATCCCGAATGACCAAGGAAACCGTACAACTCCATCGTACGTTGCCTTTACA 195418 || || ||||| | || || || ||||| | ||||| |||||||| ||||||||||| Sbjct 11660 GTGGACATTATAGCAAACGATCAGGGAAATAGAACAACCCCATCGTATGTTGCCTTTACT 11719 Query 195419 GATAATGAACGTCTCGTTGGAGATGCCGCAAAAAATCAGACAGCTATGAACCCTATCAAT 195478 |||| || | || | |||||||| ||||| || || |||| ||| || ||| Sbjct 11720 GATACAGAGAGACTAATAGGAGATGCAGCAAAGAACCAAGTTGCTAGGAATCCGGAAAAT 11779 Query 195479 ACTGTCTTTGACGCGAAGCGTCTTATTGGTCGCAAGTTTTCGGATAAGAAAGTCCAAGAC 195538 ||||| ||||| || ||| | | ||||| | || ||| | || || ||| Sbjct 11780 ACTGTATTTGATGCAAAGAGATTAATTGGAAGGAAATTTACAGAATCATCTGTGCAAAGT 11839 Query 195539 GATATAAAGGACTGGTCTTATGAAGTTGTTCCCGGTGTGGCTGATAAGCCTATGATTAAT 195598 ||||| ||| | ||| | | | ||| | ||||| | ||| || || |||||| | Sbjct 11840 GATATGAAGCATTGGCCATTTACAGTAAAGTCAGGTGTAGATGAGAAACCAATGATTGAA 11899 Query 195599 GTTGAATTTCACGGTGAGAAGAAACAATTTGCTCCCGAAGAAATTTCGTCTATGGTGTTG 195658 ||| || || || || |||||| |||| ||||||||||||||| || ||||| || Sbjct 11900 GTTACATACCAAGGGGAAAAGAAATTATTTCATCCCGAAGAAATTTCATCAATGGTTTTA 11959 Query 195659 ATTAAGATGAAGGAGACTGCGGAATCTTTCATGGGTAAAACTGTGAAAGATGCAGTTGTG 195718 |||||||| || | ||| ||| | || | |||||| | | || |||| || | Sbjct 11960 CAAAAGATGAAAGAAAATGCAGAAGCATTTTTAGGTAAATCCATAAAGAATGCTGTAATT 12019 Query 195719 ACTGTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCTGCTGCTATT 195778 |||||||| || || || | ||||| ||| |||| || ||||| || || | | | ||| Sbjct 12020 ACTGTACCAGCATATTTTAACGATTCTCAAAGACAAGCAACAAAAGATGCAGGTACCATT 12079 Query 195779 GCGGGTCTAAACTGT-CTTAGAATTATCAATGAACCAACAGCGGCTGCAATTGCTTATGG 195837 || || | || ||| | |||||||| ||||||||||| || || ||||| || ||||| Sbjct 12080 GCTGGATTGAA-TGTAATGAGAATTATTAATGAACCAACTGCAGCAGCAATAGCATATGG 12138 Query 195838 TCTGGACAAGAACAAGG--ACGAAGATAAAAATGTATTGATCTTTGATCTCGGTGGTGGT 195895 | | ||| || |||| | | || |||||| | || || || ||| | || || ||| Sbjct 12139 TTT--ACATAAAAAAGGAAAGGGGGAAAAAAATATTTTAATTTTCGATTTAGGAGGAGGT 12196 Query 195896 ACGTTTGATGTCTCACTTCTCAATATTGAAGGTGGTATATTCGAAGTAAAGGCTACTGCT 195955 || |||||||| || | | | ||||||| ||||||||||||||| || || || || Sbjct 12197 ACATTTGATGTATCTTTGTTAACAATTGAAGATGGTATATTCGAAGTGAAAGCAACAGCA 12256 Query 195956 GGTGATACTCATCTAGGTGGTGAAGATTTCGATGCACGTCTTCTCCGTCATTTGTCT--- 196012 || ||||| || |||||||||||||||| ||| | || | | |||| | | Sbjct 12257 GGAGATACACACTTAGGTGGTGAAGATTTTGATAACAGACTAGT---TAATTTCTGTGTA 12313 Query 196013 GATGAGTTCCGTCGAAAGAATAAG---AAAGATATTTCTGGAAATCCTAGGGCTCTTCGT 196069 || || || |||| |||| | |||||| | || |||| ||| || | | Sbjct 12314 GAAGATTTTAAGAGAAAAAATAGGGGTAAAGATTTATCAAAAAATAGTAGAGCATTAAGA 12373 Query 196070 CGGCTTAGGACTGCATGTGAACGTGCCAAACGAACTCTCTCTTCTACGGCTCAAACAATG 196129 || | || || ||||||| | |||||||| || | || || | | ||| | | Sbjct 12374 AGGTTAAGAACACAATGTGAAAGGGCCAAACGTACGTTGTCATCCTCTACACAAGCTACC 12433 Query 196130 GTTGAGATTGATTCGTTGTTTGACGGAATTGACTTCTA-TACAACTATTACCCGTGCACG 196188 | || |||||||| | ||||| || || || || || | ||| | | | ||| | Sbjct 12434 ATCGAAATTGATTCCCTTTTTGAAGGTATAGA-TTATAGTGTAACAGTAAGTAGAGCAAG 12492 Query 196189 TTTTGAAGAGTTAAACTCTGATTTGTTTAGGAAGTGTATGGAACCTGTTGAACAAGTACT 196248 |||||||||||| ||| | || ||| | | | ||| || || |||| | Sbjct 12493 ATTTGAAGAGTTATGTATTGACTATTTCAGGGATACGTTAGTACCAGTAGAGAAAGTCTT 12552 Query 196249 TCGTGACGCAAAGATGGATAAGTCTAAGGTTGATGAAATTGTCCTTGTGGGAGGATCAAC 196308 || || | ||||||||| | || ||||| |||| | || || || ||||| Sbjct 12553 AAAAGATGCTATGATGGATAAAAAAAGTGTACATGAAGTTGTTTTAGTTGGTGGTTCAAC 12612 Query 196309 CCGTATTCCGAAGATTCAACAGATGCTTTCTAG-CTTCTTCAATAATAAAGATTTAAACA 196367 || ||||| ||||| ||| | || | || || || || ||||| | | Sbjct 12613 ACGAATTCCTAAGATACAA-ACATTAATCAAAGAATTTTTTAACGGCAAAGAAGCATGTA 12671 Query 196368 AAACGATCAACCCGGATGAAGCAGTTGCTTATGGTGCGGCCGTTCAGGCTGCTATTCTCT 196427 | | || ||||| |||||||| || || |||||||| || || || || || || | | Sbjct 12672 GATCTATTAACCCAGATGAAGCTGTAGCATATGGTGCAGCAGTACAAGCAGCAATATTAT 12731 Query 196428 CAGGTGTTGACAATAATAACGTCCAAGATCTTCTGCTACTTGATGT-TGCACCCGTATCC 196486 | |||| | | ||| || |||||| | || || | ||||| ||| || ||||| Sbjct 12732 CGGGTGATCAGTCCAATGCTGTTCAAGATTTATTGTTATTAGATGTATGC-TCCTTATCC 12790 Query 196487 CTGGGTCTTGAAACAGCGGGTGGTGTTATGACTAAAATTATTGATAGGAACACAACTATT 196546 | ||| | ||||| || |||||||||||||| ||| | ||||| || || ||||||||| Sbjct 12791 TTAGGTTTAGAAACTGCTGGTGGTGTTATGACAAAATTGATTGAAAGAAATACAACTATT 12850 Query 196547 CCGACTAAGAAGGAACAAGTCTTTTCAACGTATTCCGATAATCAACCAGGTGTTCATATT 196606 || | || || ||| ||||| | |||||| | ||||| ||||||||||| || Sbjct 12851 CCAGCAAAAAAAAGTCAAATCTTTACGACGTATGCTGATAACCAACCAGGTGTGTTAATC 12910 Query 196607 CAAGTATATGAAGGAGAACGCTCCCGTGCAAAGGATAACCATCTACTTGG-AACTTTCGA 196665 |||||||||||||||||| | | |||| ||||| || | | || || |||| | Sbjct 12911 CAAGTATATGAAGGAGAAAGAGCATTAACAAAAGATAATAATTTGTTAGGTAAATTTC-A 12969 Query 196666 TTTGACGGGGATTCCAGCTGCACCCAGAGGTGTTCCACAGATTAATGTTTGCTTCGATAT 196725 ||| || || ||| |||| || || || ||||| ||| | ||| || ||||| Sbjct 12970 TTTAGATGGTATACCACCTGCCCCTAGGAAAGTACCACAAATTGAAGTTACGTTTGATAT 13029 Query 196726 AGACGCAAATGGAATTCTAAACGTCACAGCTGAGGACAAGGCTTCTGGCAAATCTGAAAA 196785 ||| |||||||||||| |||| || ||||||| || ||| | || ||| | | Sbjct 13030 AGATGCAAATGGAATTTTAAATGTTACAGCTGTTGAGAAGAGCACGGGAAAACAAAATCA 13089 Query 196786 GATTGTGATTACCAATGACAAGGGGCGGCTTTCTAAGGAGGAAATTGAACGTATGGTTCA 196845 ||| ||||||||||| ||||| || | || || |||||||| ||||||||| | Sbjct 13090 TATTACTATTACCAATGATAAGGGTAGGTTATCCCCTGAAGAAATTGATCGTATGGTTAA 13149 Query 196846 AGATGCGGAAAAGTACAGGGAAGAAGACGAGGTATATGAGAAACAGATGAAAGCTATAAA 196905 ||||| ||||| || | | ||| || || | || ||||| || |||| | ||| Sbjct 13150 TGATGCAGAAAAATATAAAGCAGAGGATGAAGAGAATAAGAAAAGAATTGAAGCAAGAAA 13209 Query 196906 TGATCTAGAAAA 196917 | ||||||||| Sbjct 13210 TAGTCTAGAAAA 13221 >seq27 Length=5678 Score = 226 bits (250), Expect = 4e-54 Identities = 1107/1727 (64%), Gaps = 56/1727 (3%) Strand=Plus/Minus Query 77866 ACGTGACTTTGAATTTGGGTATTTTGGATTGAAGACTCTCGAAAAAAGTTACCTGCAGTA 77925 |||||| ||| | | || ||||||||||| ||||| | |||| | ||| | | || Sbjct 2381 ACGTGATTTTAATTATGATTATTTTGGATTTAAGACATTAGAAAGATCTTATTT--ATTA 2324 Query 77926 C--ATGGATGGAAAGCTCATGGAGACACCTCAATACTTATTCATGCGTGTTTCTATTGGT 77983 | || | || | || || | ||| ||| | ||||| ||| | || || || ||| Sbjct 2323 CGTATTAACAACAAAATTATTGAAAGACCACAACATTTATTAATGAGAGTATCGATAGGT 2264 Query 77984 ATTCATGGAAATGATAT---TCCAGCGGTACTTGAAACGTATGATAAAATGTC-CAATGG 78039 || ||| ||||||| | ||| || ||||| ||| || ||||| ||| Sbjct 2263 ATACATATTGATGATATAGATAAAGCATTA---GAAACTTATCATTTGATGTCTCAAAAA 2207 Query 78040 TATGTTTATTCACGCAACACCTACTTTGTTTAATGCAGGTACTCCCCGTCCACAGATGTC 78099 ||| || | ||| || ||||| || || |||||| | |||||||| | || || ||||| Sbjct 2206 TAT-TTCACTCATGCTACACCAACATTATTTAATTCTGGTACTCCTAGACCCCAAATGTC 2148 Query 78100 ATCTTGTTTCCTACTTGCAAATAAGGAGGACTCTATTAATGGTATATACGGGACTCTCAC 78159 |||||||| || | | | || || || || | ||||||| || || || | Sbjct 2147 GTCTTGTTTTCTTTTATCTATGAAATCAGATTCAATAGAAGGTATATTCGAAACACTAAA 2088 Query 78160 AGAGTGTGCTCAGATTTCTAAGTGGGCTGGTGGTATAGGTCTTCATATTCACGATGTTCG 78219 | ||||||||| ||| ||| ||||||||||||||| | | || ||| | | Sbjct 2087 ACAGTGTGCTCTTATTAGTAAAACAGCTGGTGGTATAGGTGTAGCAGTACAAGATATAAG 2028 Query 78220 TGCAAACAAGTCCAGGATTAGAGGAACTAATGGTCAGTCTGATGGAATTATTCCTATGCT 78279 | | | || || |||||||| || ||||| || ||||| | | |||||| | Sbjct 2027 AGGACAAAATTCGTATATTAGAGGTACGAATGGAATTTCAAATGGACTCGTACCTATGTT 1968 Query 78280 TAGGGTATTCAATGCTACAGCACGCTATGTCAACCAAGCGGGTCGTA---GGAAGGGGTC 78336 || || || |||| |||||| | ||||| | |||| || | | | || || || Sbjct 1967 AAGAGTTTTTAATGATACAGCTAGATATGTAGATCAAGGAGGAGGAAAAAGAAAAGGTTC 1908 Query 78337 ATTCGCTATGTACCTTGAACCTTGGCACGCCGATGTAATGGATTTTTTGGAACTTCGTCT 78396 || ||| | || ||||||| ||||| | ||| || | || ||||| || | | Sbjct 1907 TTTTGCTGTTTATATTGAACCATGGCATTCAGATATATTCGAATTTTTAGATTTAAGAAA 1848 Query 78397 CAACCAGGGTGACGAGGAAGCTCGATGCAGGGATTTATTCACTGCTATGTGGATTCCGGA 78456 || || || | || ||| || || ||||| || |||| | ||| |||| || Sbjct 1847 AAATCATGGCAAAGAAGAATTAAGAGCAAGAGATTTGTTTTATGCTGTTTGGGTTCCTGA 1788 Query 78457 TCTTTTTATGAAGAGAGTTGAGGAAGGAGGTAAATGGTCTCTTTTCTGTCCAGAT-AAGA 78515 | || ||||| ||||| | ||| || ||| || | | |||||| || || Sbjct 1787 CTTGTTCATGAAAAGAGTAAAAGAAAATCAAAATTGGACTTTAATGTGTCCAAATGAATG 1728 Query 78516 CTAAGGGTCTTTCAGATGTATACGGGGAAGAATTCGAAAAATTGTACACTAAATACGAAG 78575 | ||| || || || || |||||||| |||||||| || ||| || |||| Sbjct 1727 CCCAGGA-CTAAGTGAAACATGGGGTGAAGAATTTGAAAAATTATATGTTAAGTATGAAG 1669 Query 78576 AGGAAGGTCTCGCTATTAAGACAATTGATGCATCTGAACTATGGAAAGCTATTATCAAAA 78635 | ||| | | | | || || | ||| || ||||| ||||| | ||| Sbjct 1668 AAGAAAATATGGGCAAAAAAACTGTATTAGCACAAGATTTATGGTTTGCTATATTACAAA 1609 Query 78636 GTCAAACAGAGACCGGCACCCCGTATATGCTATACAAAGACAGCTGTAACAGAAAGTCTA 78695 |||||| || || || || |||||| |||| |||||| ||||| || || | Sbjct 1608 GTCAAATTGAAACAGGTGTTCCATATATGTTATATAAAGACTCATGTAATGCTAAATCGA 1549 Query 78696 ACCAAAAGAACCTAGGTGTCATCAAAAGCTCTAACCTTTGCACAGAAATTCTGGAATACA 78755 | ||||| || |||||| |||||| | ||| | || |||||| | || || | Sbjct 1548 ATCAAAAAAATCTAGGTACTATCAAATGTAGTAATTTATGTTGTGAAATTATTGAGTATA 1489 Query 78756 CGGATAAGAATGAAACAGCTGTATGTAATCTAGGGTCTATCGCTCTACCAAAGTTTGTTG 78815 | ||||| |||||||||||||| | ||||| ||| || || ||||| | Sbjct 1488 CTTCACCTGATGAAGTTGCTGTATGTAATCTTGCTTCTATTGCTTTATGCAAATTTGTGG 1429 Query 78816 A-TCGAGAATTAAAGACATTTGATTATTCAAAGCTCCACGAAATTACAAAAATCGTAACT 78874 | | | || ||||| |||| ||| | ||| | | |||||||||||||| | ||| Sbjct 1428 ACTTGGAAAAAAAAGA-ATTTAATTTTAAAAAATTATATGAAATTACAAAAATTATTACT 1370 Query 78875 AAAAATTTAAATCGTGTAATTGACCGTAACTACTACCC-AGTCGAGACTGCTAAATATTC 78933 | |||| || || ||||||| | || || ||||| | | ||| || ||| || Sbjct 1369 AGAAATCTAGATAAAATAATTGAAAGAAATTATTACCCTATTAAAGA-AGCCAAAGTGTC 1311 Query 78934 TAATATGAAACATAGACCAATTGGTCTAGGTGTTCAAGGATTGGCAGAT-GTATTCAACT 78992 ||| | || |||||||| || ||| |||||||||| || || |||||| | || || Sbjct 1310 TAACAAGAGGCATAGACCTATAGGTATAGGTGTTCAGGGGTTAGCAGATACTTTTATGCT 1251 Query 78993 TGTGTGGTCTTCCCTTCGATTGCGAAGATTC-AAGGACTATGAATGCTCATATTTTCGAG 79051 | || | | ||||| || | || || | || || | ||||| || ||||| Sbjct 1250 TTTGAGAT-ATCCCTATGAGTCGGATGAAGCTAAAGAGT-TGAATAGAAGAATATTCGAA 1193 Query 79052 ACTATTTATCATGCAGCTTTAGAAGCAAGTTCA--GAACTTGCTGAAATTAATGGGCCTT 79109 || || || |||| ||||||||| | || | ||| | || ||| |||| |||| Sbjct 1192 ACCATGTACTATGCTGCTTTAGAA--ATGTCTATGGAATTAGCAATGATTCATGGACCTT 1135 Query 79110 ATGAGAGTTTCGAGGGTTCACCCGCTTCACAAGGTCTTCTTCAACCAGATCTATGGGAAG 79169 |||| || ||||| || ||| |||||| |||| ||| ||| | | |||| Sbjct 1134 ATGAATCTTATCAGGGTAGTCCAGCTAGTCAAGGTATTCTACAATTTGATATGT-GGAAT 1076 Query 79170 GTGAAGCTAAATA--CAGTGGTCGTTACGATTGGGATGCAATGAGAAAGCGTGTAATGAC 79227 ||| || ||| ||| | | ||||||||| | | ||||| | || || Sbjct 1075 AAAAAGGTAGATAGTAAGTACTGG----AATTGGGATGAACT---AAAGC-TCAAAATAC 1024 Query 79228 G----AAGGGTCTGAGAAACAGTCTTCTCGTAGCACCAATGCCCACTGCTTCGACGGCTC 79283 | | ||| | || || | | || | ||||| ||||| |||||||| || ||| Sbjct 1023 GTAAACATGGTTTAAGGAATTCTTTACTACTTGCACCTATGCCAACTGCTTCTACATCTC 964 Query 79284 AGATCCTCGGTAATAATGAGTGTTTTGAACCATACACTACAAACATATATCTTCGTCGCA 79343 | || || || ||||| || | |||||||| || |||| ||||| ||| | | | Sbjct 963 AAATACTTGGGAATAACGAATCCTTTGAACCTTATACTAGTAACATTTATTATAGAAGAG 904 Query 79344 CATTAGCTGGTGAATTTGTTGTGGTTAACAAACATCTTGTT-GAAGATTTGAAGAAGTTA 79402 || ||| |||||| |||| |||||| ||| ||||| ||||| | | | || Sbjct 903 TTTTGAGTGGAGAATTTTTTGTCGTTAACCCTCAT-TTGTTAAAAGATCT--ATTCGATA 847 Query 79403 -GGTCTT-TGGTCAAAAGAGATGAAA---GACTTAATGGTCAAAGCCGGAGGGAGTGTGC 79457 || ||| ||| |||| |||||| | ||||| | | ||| ||||| | Sbjct 846 GGGGCTTATGGGACGAAGATATGAAACAGCAGTTAATTGCGCATAATGGA---AGTGTCC 790 Query 79458 AAAACATAGTAGAGATACCAGATAATATTAAAAATCTTTATAAGACTGTTTGGGAAATTA 79517 | | ||| || ||||| || || | || | || || || || || |||||||| | Sbjct 789 AGTATATAAGTGAAATACCCAATGATTTGAAGGAACTCTACAAAACAGTCTGGGAAATCA 730 Query 79518 GCCAAAAATGTATTATCGACATGGCAGCGGACAGGGGTCGTTTTATC 79564 ||||| |||||||||||||| || || |||| ||||||| Sbjct 729 AACAAAAGAACATTATCGACATGGCTGCCGATCGGGGAGTTTTTATC 683 >seq470 Length=33878 Score = 185 bits (204), Expect = 1e-41 Identities = 443/670 (66%), Gaps = 9/670 (1%) Strand=Plus/Plus Query 196190 TTTGAAGAGTTAAACTCTGATTTGTTTAGGAAGTGTATGGAACCTGTTGAACAAGTACTT 196249 |||||||||||||| ||| || ||||| | | | ||||| ||| || ||||| | Sbjct 24283 TTTGAAGAGTTAAATGATGACTTATTTAGAGAAACTTTAGAACCAGTTAAAAAAGTATTA 24342 Query 196250 CGTGACGCAAAGATGGATAAGTCTAAGGTTGATGAAATTGTCCTTGTGGGAGGATCAACC 196309 ||| ||||| || || ||| |||| ||||| ||| | || || || ||||| Sbjct 24343 GATGATGCAAAATATGAAAAAAGTAAAATTGACGAAATAGTCTTAGTAGGTGGTTCAACA 24402 Query 196310 CGTATTCCGAAGATTCAACAGATGCTTTCTAGCTTCTTCAATAATAAAGATTTAAACAAA 196369 ||||| || || |||||||| || || || || ||| |||||| ||| | | Sbjct 24403 CGTATACCTAAAATTCAACAAATAATTAAAGATTTTTTTAATGGTAAAGAACCAAATAGA 24462 Query 196370 ACGATCAACCCGGATGAAGCAGTTGCTTATGGTGCGGCCGTTCAGGCTGCTATTCTCTCA 196429 || || || |||||||| || ||||||||||| || | || || | |||| | | | Sbjct 24463 GGAATTAATCCAGATGAAGCTGTAGCTTATGGTGCTGCTATCCAAGCAGGTATTATTTTA 24522 Query 196430 GGTGTTGACAATAATAACGTCCAAGATCTTCTGCTACTTGATGTTGCACCCGTATCCCTG 196489 || | || ||| || ||||| | | || | ||||| | || | | | Sbjct 24523 GGAG-----AAGAATTAC----AAGATGTAGTTTTATTAGATGTAACTCCATTGACTTTA 24573 Query 196490 GGTCTTGAAACAGCGGGTGGTGTTATGACTAAAATTATTGATAGGAACACAACTATTCCG 196549 ||| ||||||| | ||||| |||||||| || ||||| | || || ||| ||| || Sbjct 24574 GGTATTGAAACTGTTGGTGGGATTATGACTCAACTTATTAAAAGAAATACAGTTATACCA 24633 Query 196550 ACTAAGAAGGAACAAGTCTTTTCAACGTATTCCGATAATCAACCAGGTGTTCATATTCAA 196609 || || || |||| ||||| || ||| ||||| ||||||| ||| |||||| Sbjct 24634 ACAAAAAAATCACAAACATTTTCTACTTATCAAGATAACCAACCAGCTGTCTTAATTCAA 24693 Query 196610 GTATATGAAGGAGAACGCTCCCGTGCAAAGGATAACCATCTACTTGGAACTTTCGATTTG 196669 || | |||||||||||| | |||| ||||| ||| || | |||| || || || Sbjct 24694 GTTTTTGAAGGAGAACGAGCATTAACAAAAGATAATCATTTATTAGGAAAATTTGAATTA 24753 Query 196670 ACGGGGATTCCAGCTGCACCCAGAGGTGTTCCACAGATTAATGTTTGCTTCGATATAGAC 196729 | || |||||| |||||| |||||||| ||| | ||| | || || | | || Sbjct 24754 TCTGGTATTCCACCTGCACAAAGAGGTGTACCAAAAATTGAAGTCACATTTACTGTTGAT 24813 Query 196730 GCAAATGGAATTCTAAACGTCACAGCTGAGGACAAGGCTTCTGGCAAATCTGAAAAGATT 196789 ||||| || || | || ||| || ||||| | |||| || ||| || ||| Sbjct 24814 AAGAATGGTATATTACATGTTGAAGCAGAAGACAAAGGAACTGGTAAGTCTAAAGGAATT 24873 Query 196790 GTGATTACCAATGACAAGGGGCGGCTTTCTAAGGAGGAAATTGAACGTATGGTTCAAGAT 196849 ||||||||||| || || | | || ||||| | || ||| ||| || | || Sbjct 24874 ACTATTACCAATGATAAAGGTAGATTATCAAAGGAACAGATAGAAAAGATGATTAACGAC 24933 Query 196850 GCGGAAAAGT 196859 || ||||||| Sbjct 24934 GCTGAAAAGT 24943 Score = 176 bits (194), Expect = 6e-39 Identities = 257/364 (71%), Gaps = 6/364 (2%) Strand=Plus/Plus Query 195625 ATTTGCTCCCGAAGAAATTTCGTCTATGGTGTTGATTAAGATGAAGGAGACTGCGGAATC 195684 |||||| || ||| ||||| ||||||| || |||||||| || | || |||| Sbjct 23724 ATTTGCACCTGAACAAATTAGTGCTATGGTATTAGAAAAGATGAAAGAAATAGCTCAATC 23783 Query 195685 TTTCATGGGTAAAACTGTGAAAGATGCAGTTGTGACTGTACCTGCTTACTTCAGTGATTC 195744 || | || ||| | || ||| ||||||| || || ||||| || || || | |||| | Sbjct 23784 CTTTTTAGGAAAACCAGTTAAAAATGCAGTAGTTACAGTACCAGCATATTTTAATGATGC 23843 Query 195745 ACAACGACAGGCGACAAAGGACGCTGCTGCTATTGCGGGTCTAAACTGTCTTAGAATTAT 195804 ||| |||| || ||||| ||||| | | ||||| ||| |||| | | | ||||| Sbjct 23844 TCAAAGACAAGCTACAAAAGACGCAGGAACAATTGCTGGTTTAAATATTGTACGTATTAT 23903 Query 195805 CAATGAACCAACAGCGGCTGCAATTGCTTATGGTCTGGACAAGAACAAGGACGAAGATAA 195864 ||||||||||| || ||||| | || |||||| | || |||| | ||||| | Sbjct 23904 TAATGAACCAACTGCTGCTGCTTTAGCATATGGTTTAGATAAGA------AGGAAGAAAC 23957 Query 195865 AAATGTATTGATCTTTGATCTCGGTGGTGGTACGTTTGATGTCTCACTTCTCAATATTGA 195924 | | |||| | | || | ||||| || || |||||||| ||| |||| |||||| Sbjct 23958 TAGTATATTAGTATACGACTTAGGTGGAGGAACATTTGATGTATCAATTCTTGTTATTGA 24017 Query 195925 AGGTGGTATATTCGAAGTAAAGGCTACTGCTGGTGATACTCATCTAGGTGGTGAAGATTT 195984 |||| | ||||||||| | || || || ||| |||| ||| ||||||| |||||||| Sbjct 24018 TAATGGTGTTTTCGAAGTATATGCAACAGCAGGTAATACACATTTAGGTGGAGAAGATTT 24077 Query 195985 CGAT 195988 |||| Sbjct 24078 CGAT 24081 >seq60 Length=41302 Score = 165 bits (182), Expect = 1e-35 Identities = 159/204 (78%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 |||||||| || || ||||| || || |||||||| || || || || || || | || Sbjct 5934 ATGCAAATTTTCGTAAAAACTCTAACGGGAAAAACCATTACGCTTGATGTCGAACCATCT 5993 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981 ||||| || || || | || || || |||||||||||||| || |||||||| || || Sbjct 5994 GACACTATTGAGAATGTAAAGGCAAAAATTCAAGATAAGGAGGGAATTCCACCAGACCAA 6053 Query 171982 CAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAAC 172041 ||| |||| |||||||| || |||||||| ||||||||| | ||| | |||| ||||| Sbjct 6054 CAAAGACTAATTTTTGCAGGAAAACAGCTAGAAGATGGAAGAACCTTATCTGACTACAAT 6113 Query 172042 GTTCAAAAGGAGTCTACTCTACAC 172065 ||||||||||||||||| | ||| Sbjct 6114 ATTCAAAAGGAGTCTACTTTGCAC 6137 >seq124 Length=28153 Score = 163 bits (180), Expect = 4e-35 Identities = 174/230 (76%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 171860 GTATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGT 171919 |||||||||||||||| ||||| | || |||||||| || || || || |||||| | | Sbjct 11537 GTATGCAAATCTTTGTAAAAACATTAACAGGAAAAACAATAACTCTTGATGTTGAGCCAT 11478 Query 171920 CAGACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATC 171979 |||| || || || || | || || || || ||||| |||||||| |||||||| |||| Sbjct 11477 CAGATACCATTGAGAATGTTAAGGCTAAAATACAAGACAAGGAAGGAATTCCACCTGATC 11418 Query 171980 AGCAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACA 172039 | || || | || ||||| || ||||| | ||||||||| | || | | ||||||| Sbjct 11417 AACAGAGATTAATATTTGCAGGAAAACAATTAGAAGATGGAAGAACATTGTCGGATTACA 11358 Query 172040 ACGTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGGT 172089 || ||||||| ||||| || |||||| | ||| |||| | | |||||| Sbjct 11357 ACATTCAAAAAGAGTCAACCCTACACTTAGTTTTAAGATTAAGAGGTGGT 11308 Score = 152 bits (168), Expect = 7e-32 Identities = 164/217 (76%), Gaps = 0/217 (0%) Strand=Plus/Minus Query 171860 GTATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGT 171919 |||||||||||||||| ||||| | || |||||||| || || || || |||||| | | Sbjct 11765 GTATGCAAATCTTTGTAAAAACATTAACAGGAAAAACAATAACACTTGATGTTGAGCCAT 11706 Query 171920 CAGACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATC 171979 |||| || || || || | || || || |||||||| |||||||| |||||||| |||| Sbjct 11705 CAGATACCATTGAGAATGTTAAGGCAAAAATTCAAGACAAGGAAGGAATTCCACCTGATC 11646 Query 171980 AGCAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACA 172039 | || || | || ||||| || ||||| | |||||||| | || | | || |||| Sbjct 11645 AACAGAGATTAATATTTGCAGGAAAACAATTAGAAGATGGTAGAACATTATCAGACTACA 11586 Query 172040 ACGTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAG 172076 || ||||||| ||||| ||| ||||| | || |||| Sbjct 11585 ACATTCAAAAAGAGTCCACTTTACACTTAGTCTTAAG 11549 Score = 132 bits (146), Expect = 6e-26 Identities = 142/188 (76%), Gaps = 0/188 (0%) Strand=Plus/Minus Query 171889 GGAAAAACTATCACCCTCGAGGTTGAGTCGTCAGACACAATCGATAACATCAAAGCCAAG 171948 ||||||||||| || || || ||||| | || || || || || || | || || || Sbjct 11964 GGAAAAACTATAACTCTTGATGTTGAACCATCGGATACTATTGAGAATGTTAAGGCAAAA 11905 Query 171949 ATTCAAGATAAGGAAGGCATTCCACCCGATCAGCAACGACTTATTTTTGCTGGTAAACAG 172008 ||||||||||||||||| |||||||| ||||| || || | || ||||| || ||||| Sbjct 11904 ATTCAAGATAAGGAAGGAATTCCACCTGATCAACAGAGATTAATATTTGCGGGAAAACAA 11845 Query 172009 CTTGAAGATGGACGTACCCTCGCTGATTACAACGTTCAAAAGGAGTCTACTCTACACCTT 172068 | ||||||||| | || | | ||||||||| ||||||| ||||| ||| ||||| | Sbjct 11844 TTAGAAGATGGAAGAACATTGTCGGATTACAACATTCAAAAAGAGTCCACTTTACACTTA 11785 Query 172069 GTTCTAAG 172076 || |||| Sbjct 11784 GTCTTAAG 11777 >seq288 Length=38684 Score = 114 bits (126), Expect = 2e-20 Identities = 248/372 (67%), Gaps = 12/372 (3%) Strand=Plus/Minus Query 196376 AACCCGGATGAAGCAGTTGCTTATGGTGCGGCCGTTCAGGCTGCTATTCTCTCAGGTGTT 196435 ||||| |||||||||||||||| ||||| || | || | | | || | ||| | Sbjct 5514 AACCCAGATGAAGCAGTTGCTTTAGGTGCAGCTATACAAGGAGGTGTTTTAAAAGGAGA- 5456 Query 196436 GACAATAATAACGTCCAAGATCTTCTGCTACTTGATGTTGCACCCGTATCCCTGGGTCTT 196495 ||||| ||||| | || || | |||||| || |||| | ||| | Sbjct 5455 ------AATAA-----AAGATTTACTTCTTTTAGATGTTATTCCTTTATCATTAGGTATA 5407 Query 196496 GAAACAGCGGGTGGTGTTATGACTAAAATTATTGATAGGAACACAACTATTCCGACTAAG 196555 ||||| |||||||| | |||||| | ||| |||| || ||||| || || || ||| Sbjct 5406 GAAACTTTAGGTGGTGTATTTACTAAATTAATTAATAGAAATACAACAATCCCAACAAAG 5347 Query 196556 AAGGAACAAGTCTTTTCAACGTATTCCGATAATCAACCAGGTGTTCATATTCAAGTATAT 196615 || ||| | ||||| || | ||||||| ||| || ||| |||| |||| ||| Sbjct 5346 AAATCGCAAATATTTTCCACAGCTGCCGATAACCAAACACAAGTTAGTATTAAAGTTTAT 5287 Query 196616 GAAGGAGAACGCTCCCGTGCAAAGGATAACCATCTACTTGGAACTTTCGATTTGACGGGG 196675 |||||||| | || | ||||| | | | || |||| ||||| || Sbjct 5286 CAAGGAGAAAGAGAAATGGCTAGTGATAATAAAATGTTAGGCTCTTTTGATTTAGTTGGT 5227 Query 196676 ATTCCAGCTGCACCCAGAGGTGTTCCACAGATTAATGTTTGCTTCGATATAGACGCAAAT 196735 |||||| ||||||| |||||||||||||| ||| | ||| |||||| | || || ||| Sbjct 5226 ATTCCACCTGCACCTAGAGGTGTTCCACAAATTGAAGTTACATTCGATGTTGATGCTAAT 5167 Query 196736 GGAATTCTAAAC 196747 | |||| | ||| Sbjct 5166 GCAATTATTAAC 5155 >seq392 Length=30882 Score = 107 bits (118), Expect = 3e-18 Identities = 514/810 (63%), Gaps = 18/810 (2%) Strand=Plus/Minus Query 60175 TAATCACCAACCCGCTTTTCAAAGAAGTTTGTTTTACCATCCAACGAAATATTTTCCATA 60234 ||||| |||| | ||||| || || |||||||| || | | || || ||||| Sbjct 27562 TAATCGGCAACTCTTTTTTCGAAAAAATTTGTTTTTCCTTGAAGAGATATCAAATCCATC 27503 Query 60235 AAATCAAAGGGGTTCTTTGAATTCCAAATCGTTGGGTGTCCAACTTGTTTTAAAAGACGG 60294 ||| ||| || || ||||||| | | ||| | ||| | || ||| | | Sbjct 27502 CAATTAAAAGGATTTTTTGAATAAAAGACTTTTGAGCATCCTAAACATTCTAACAATCTA 27443 Query 60295 TCAGACACGTATTCAATGTATTCCGACATCTTTTCGGAATTCATTCCTATGAGACTACAT 60354 |||| ||| |||||||||||| ||||| | |||||||||||||| | ||| Sbjct 27442 TCAGCCACAAATTCAATGTATTGTGACATTAATCTTGAATTCATTCCTATCAAGTCACAA 27383 Query 60355 GGGAGTGCATCTAAAATAAAACCCTTTTCAATCTCAACAGCTTCTTTTATAATCGTATGA 60414 || | | || | ||||| ||| | || || |||||||||| ||| | ||| Sbjct 27382 GGTAAAGATTCACATATAAATGATCGTTCTACTTCTACTGCTTCTTTTACAATATTCTGA 27323 Query 60415 ATAATATCCTTTGAAGGTTTTTGTTGAAGCATATTAAATAATTCAACTG-CAAATTCTTG 60473 | ||| || | || ||| | || |||| | || || ||| ||| | ||| ||| Sbjct 27322 ACAATTTCTTCTGGTAATTTATTTTCCAGCAGACTATAT-ATTAAACAGTTAAAGTCTGT 27264 Query 60474 ATGAAGACCTTCGTCACGACTAATAAGTTCATTACTGAAACAAAGTCCGGGAAGTAGACC 60533 ||| | ||||| || | |||||| | ||||||||| ||| || || | | | | Sbjct 27263 ATGTAATCCTTCATCTCTACTAATTAATTCATTACTAAAAGTTAGCCCATGTAATTTATT 27204 Query 60534 CCGCTTCTTTAACCAATATACAGCACAGAACGAACCACTGAAAAAGATACCCTCTACACA 60593 | || || ||||| | | |||||| || |||||| || || ||||| |||||||| Sbjct 27203 TTGTTTTTTAAACCAGAAAATAGCACAAAAACTACCACTAAACAATATACCTTCTACACA 27144 Query 60594 CGCAAACGCAAAAAGACGTTCAGCAAATGGTCTAGATTTGTCAAACCATTTCATGGCCCA 60653 ||| || | | ||||| ||||| | | | || | || |||||| ||||| Sbjct 27143 TGCATTTGCTACTATCCGTTCTGCAAAAGAATTGGTATTATTAATCCATTTGGCAGCCCA 27084 Query 60654 TTCAGCCTTTCGTTCGATACAAGGGATTGTTTGAATAGCTTGAAA------TAATTGTTT 60707 ||| || || | | || || ||| || || ||||| |||| | | Sbjct 27083 CAAAGCTTTATTTTTAACAGCTGGTATATTTTCTATTGCGTGAAATAAATTTAATCGCTC 27024 Query 60708 CTTTTCCGAAGGGTCTTTGATATATTTGTCGATTAATTTACTATATGTTTCACCGTGAAC 60767 |||||| || || ||||| || || || || ||| || ||||| |||| Sbjct 27023 CTTTTC------ATCCTTTATATAATTATCAATCAACAAACTGTAAGTTTCTGAATGAAT 26970 Query 60768 CAT-TTCGTTGTGACACTGATAACCATAAAAAGAACGAGCTTCGGAGGCTTGTACTTCAT 60826 | | | || | ||| || |||||| |||||| | ||| ||||| | Sbjct 26969 ATTCTCCACTGCTA-TTTGAAAAGAATAAAATTTCTTAGCTTCCGTTATTTGAACTTC-T 26912 Query 60827 CTGCAAAA-TTATTGTTAATGTTTTCAAAAACAATTCCATCCGACCCAGCGAAGAATGCG 60885 || |||| ||| | | ||||| ||||| |||||||| | || || ||||| Sbjct 26911 CTTAAAAATTTACTAGCCAAATTTTCTAAAACTATTCCATCACTTGCTGCAAAAAATGCT 26852 Query 60886 AGTATGTATTTTATGAACTTCTGTTCGTTATCCGTTAATTGTACCCAATCTTCCATATCT 60945 | | | |||||| || | | ||| || || |||||| | | |||||| || ||| Sbjct 26851 AACACATGTTTTATAAAATGTTTTTCATTTTCATTTAATTTTTCAAAATCTTTCAAATCG 26792 Query 60946 TTTGATAAATCAATTTCTTCTGCCGTCCAA 60975 |||||||||| || |||||||| |||||| Sbjct 26791 CTTGATAAATCTATCTCTTCTGCTGTCCAA 26762 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 657854563214160