Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmodium_20brasilianum_20[genbank_20GCA_5F001885115.2_202016-12- 01] 953 sequences; 30,089,869 total letters Query= NC_023573.1 Length=142094 Score E Sequences producing significant alignments: (Bits) Value seq183 86.0 6e-12 >seq183 Length=22570 Score = 86.0 bits (94), Expect = 6e-12 Identities = 291/444 (66%), Gaps = 12/444 (3%) Strand=Plus/Plus Query 93604 AGGTAGTGGTGCTGTTTACCTAAATATATTCCACAATGATATATTGGA-TTTATTAAGCT 93662 |||||||||||| | || | || || || ||| ||||| | | || ||||| | | Sbjct 18863 AGGTAGTGGTGCGGCATATTTGAACATTTTTCACTATGATTTGGTAGACTTTATCGAT-T 18921 Query 93663 CTAAGAAAATCAATGCCAGTGAATCTGTTAGACTAGATAAATTATCTATTGGTGTTACAA 93722 ||| ||||| ||||| |||| ||| | | | | |||||||| | | | Sbjct 18922 GTAAAAAAATTAATGCAGATGAAAAGTCAAGAATTCAGACCCTTTCTATTGGATTAATAG 18981 Query 93723 TCCCTAACAAATTTATGGAGTTAGTTAAAGAAGGTAAA--CCTTTCTATACTTTTGATAC 93780 | || |||| ||| | | |||| ||| ||| |||| | ||| |||| ||||| || Sbjct 18982 TTCCCGACAAGTTTTTTCAATTAGCTAAGGAAAATAAAAACTTTTTTATA--TTTGA-AC 19038 Query 93781 TTACGAC-ATTAATAAAGTGTATGGTAAATATTTAGATGAGCTAAACATTGATGAATGGT 93839 || || ||| | ||| ||||| || ||| || || | || ||||||| | Sbjct 19039 CTAATACTATTTTTCAAGAATATGGAGTATTTTTGTCAGATTTAGATATGAATGAATGAT 19098 Query 93840 ATGATAAGTTACTAGATAATGATAGTATCGGTAAAGTAAAACATGAT--GCTAGAGAAGT 93897 |||| || ||| | ||| | ||| ||| ||| || || |||||| | | Sbjct 19099 ATGACAAATTAGCTGTCAATCCAAATATTTTGAAA--AAAGAATTATCTGCTAGATTAAT 19156 Query 93898 TATGACAGATATTGCTAAAACGCAATTAGAATCAGGATACCCTTATGTATTCTATATTGA 93957 | | || | || || ||| ||||| ||||| || || ||||| ||| | | |||||| Sbjct 19157 TCTTACCAAGATAGCGCAAATTCAATTTGAATCTGGTTATCCTTACGTAATATTTATTGA 19216 Query 93958 TAATGCTAATGATAATCACCCATTGAAAAACCTAGGTAAAGTTAAAATGAGTAACTTATG 94017 |||||||||| | ||| | || ||||| |||| | | | |||||||| || | || Sbjct 19217 TAATGCTAATAAAAATAATCCTTTGAAGGGAGTAGGGAGAATCAAAATGAGCAATCTTTG 19276 Query 94018 TACAGAAATTTCACAATTACAAGA 94041 ||||||||||| || |||| || Sbjct 19277 TACAGAAATTTTTCAGATACAGGA 19300 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 454567384901520