Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmodium_20brasilianum_20[genbank_20GCA_5F001885115.2_202016-12- 01] 953 sequences; 30,089,869 total letters Query= NC_023615.1 Length=196456 Score E Sequences producing significant alignments: (Bits) Value seq408 91.5 2e-13 >seq408 Length=28392 Score = 91.5 bits (100), Expect = 2e-13 Identities = 131/180 (73%), Gaps = 5/180 (3%) Strand=Plus/Plus Query 193332 AAAAT-TGAAAAT--AAAATTTTTATAGGGCCAACTTATTACCATCGTCTTAAACACATG 193388 ||||| | ||||| ||||||||||| || || |||||||| || | | ||||| ||| Sbjct 21016 AAAATGTTAAAATCAAAAATTTTTATTGGTCCGACTTATTATCAAAGGTTAAAACATATG 21075 Query 193389 GTTAAGGATAAAATGCATGCTAGAAGTCATGGGCAAGTGACTA-CTTTACATCGACAACC 193447 ||| | |||||||| |||||||||||| || | | |||| ||||| || ||||| Sbjct 21076 GTTGAAGATAAAATACATGCTAGAAGTAGAGGACCTTTAACTATGATTACA-CGTCAACC 21134 Query 193448 AAATTGTGGTCGTTCTCAAGGTGGAGGTTTAAGATTTGGAGAAATGGAAAAAGACTGTAT 193507 || || | || || ||| ||| || | ||||| |||||||||| ||| ||||| Sbjct 21135 AACAGAAGGAAGATCAAGAGATGGTGGTCTACGTTTTGGTGAAATGGAAAGAGATTGTAT 21194 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 628523712622080