Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmodium_20brasilianum_20[genbank_20GCA_5F001885115.2_202016-12- 01] 953 sequences; 30,089,869 total letters Query= NC_024355.1 Length=93794 Score E Sequences producing significant alignments: (Bits) Value seq183 82.4 5e-11 >seq183 Length=22570 Score = 82.4 bits (90), Expect = 5e-11 Identities = 99/132 (75%), Gaps = 2/132 (2%) Strand=Plus/Plus Query 73929 CCTGTGTACACGCCGTGTATCGACTCATCTCTTATTATTAAATTAATAATCTCTCCTGCT 73988 ||| |||| | || ||||| | |||||||| |||||||||||||| |||||||| ||| Sbjct 16911 CCTATGTAAAGTCCATGTATAGCTTCATCTCTAATTATTAAATTAATTATCTCTCC-GCT 16969 Query 73989 -CCAACTAGTTTTCCTTGTCCTGCCATATATAATGGATAGTAAAATCCAGAATAGAATAG 74047 ||| | | ||||| | | ||||||| ||||| |||||||||| || || || Sbjct 16970 GTTAACCATTAGGCCTTGAGAGGATAGATATAATAGATAGAAAAATCCAGAGTAAAAAAG 17029 Query 74048 AAATGTTTCTAA 74059 ||| | |||||| Sbjct 17030 AAACGATTCTAA 17041 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 300012515407915