Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmodium_20brasilianum_20[genbank_20GCA_5F001885115.2_202016-12- 01] 953 sequences; 30,089,869 total letters Query= NC_025257.1 Length=102759 Score E Sequences producing significant alignments: (Bits) Value seq124 132 3e-26 >seq124 Length=28153 Score = 132 bits (146), Expect = 3e-26 Identities = 169/230 (73%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 ||||||||| || | ||| || || ||||| || ||||||||| ||||||||||| || Sbjct 11308 ACCACCTCTTAATCTTAAAACTAAGTGTAGGGTTGACTCTTTTTGAATGTTGTAATCCGA 11367 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 | ||| | | | || || ||||||||||| ||||| || || | ||| ||||| | || Sbjct 11368 CAATGTTCTTCCATCTTCTAATTGTTTTCCTGCAAATATTAATCTCTGTTGATCAGGTGG 11427 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700 | ||||| ||||| ||||| | | ||||| || | ||| || || || | Sbjct 11428 AATTCCTTCCTTGTCTTGTATTTT-AGCCTTAACATTCTCAATGGTATCTGATGGCTCAA 11486 Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 | |||| || || ||||| |||||||| |||||||||||||| |||||| Sbjct 11487 CATCAAGAGTTATTGTTTTTCCTGTTAATGTTTTTACAAAGATTTGCATA 11536 Score = 132 bits (146), Expect = 3e-26 Identities = 169/230 (73%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 ||| ||||| || | ||| || || |||| |||| ||||||||| |||||||| || || Sbjct 11536 ACCTCCTCTTAATCTTAAGACTAAGTGTAAAGTGGACTCTTTTTGAATGTTGTAGTCTGA 11595 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 | ||| | | || || ||||||||||| ||||| || || | ||| ||||| | || Sbjct 11596 TAATGTTCTACCATCTTCTAATTGTTTTCCTGCAAATATTAATCTCTGTTGATCAGGTGG 11655 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700 | ||||| ||||| |||||| || | ||||| || | ||| || || || | Sbjct 11656 AATTCCTTCCTTGTCTTGAATTTT-TGCCTTAACATTCTCAATGGTATCTGATGGCTCAA 11714 Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 | |||| || || ||||| |||||||| |||||||||||||| |||||| Sbjct 11715 CATCAAGTGTTATTGTTTTTCCTGTTAATGTTTTTACAAAGATTTGCATA 11764 Score = 98.7 bits (108), Expect = 7e-16 Identities = 145/203 (71%), Gaps = 2/203 (1%) Strand=Plus/Plus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 ||| ||||| || | ||| || || |||| |||| ||||||||| ||||||||||| || Sbjct 11764 ACCTCCTCTTAATCTTAAGACTAAGTGTAAAGTGGACTCTTTTTGAATGTTGTAATCCGA 11823 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 | ||| | | | || || ||||||||||| ||||| || || | ||| ||||| | || Sbjct 11824 CAATGTTCTTCCATCTTCTAATTGTTTTCCCGCAAATATTAATCTCTGTTGATCAGGTGG 11883 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700 | ||||| || || |||||| || | ||||| || | || || || ||| | Sbjct 11884 AATTCCTTCCTTATCTTGAATTTT-TGCCTTAACATTCTCAATAGTATCCGATGGTTCAA 11942 Query 33701 CGTCAACCGTGATCGTTTTACCT 33723 | |||| || || ||||| ||| Sbjct 11943 CATCAAGAGTTATAGTTTTTCCT 11965 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 328700182205760