Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmodium_20brasilianum_20[genbank_20GCA_5F001885115.2_202016-12- 01] 953 sequences; 30,089,869 total letters Query= NC_025417.1 Length=140903 Score E Sequences producing significant alignments: (Bits) Value seq183 84.2 2e-11 >seq183 Length=22570 Score = 84.2 bits (92), Expect = 2e-11 Identities = 112/156 (72%), Gaps = 0/156 (0%) Strand=Plus/Plus Query 100120 TGCTAGAGAAGTTATGACAGACATTGCTAAAACACAATTAGAATCAGGCTACCCTTATGT 100179 ||||||| | || | || | || || ||| ||||| ||||| || || ||||| || Sbjct 19145 TGCTAGATTAATTCTTACCAAGATAGCGCAAATTCAATTTGAATCTGGTTATCCTTACGT 19204 Query 100180 ATTCTATATTGATAATGCTAATGATAATCACCCATTGAAAAACCTAGGTAAAGTTAAAAT 100239 | | | |||||||||||||||| | ||| | || ||||| |||| | | | ||||| Sbjct 19205 AATATTTATTGATAATGCTAATAAAAATAATCCTTTGAAGGGAGTAGGGAGAATCAAAAT 19264 Query 100240 GAGTAACTTATGTACAGAAATTTCACAATTACAAGA 100275 ||| || | ||||||||||||| || |||| || Sbjct 19265 GAGCAATCTTTGTACAGAAATTTTTCAGATACAGGA 19300 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 450756230302440