Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmodium_20brasilianum_20[genbank_20GCA_5F001885115.2_202016-12- 01] 953 sequences; 30,089,869 total letters Query= NC_026511.1 Length=140913 Score E Sequences producing significant alignments: (Bits) Value seq60 86.0 6e-12 >seq60 Length=41302 Score = 86.0 bits (94), Expect = 6e-12 Identities = 147/211 (70%), Gaps = 2/211 (1%) Strand=Plus/Minus Query 35528 ACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCC 35587 ||||| || || ||| |||||||||||| ||||| || | ||||||| | || || Sbjct 6142 ACCAAGTGCAAAGTAGACTCCTTTTGAATATTGTAGTCAGATAAGGTTCTTCCATCTTCT 6083 Query 35588 AGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATG 35647 ||||| || || ||||| || | | || ||||| | |||| | |||||| | | || Sbjct 6082 AGCTGTTTTCCTGCAAAAATTAGTCTTTGTTGGTCTGGTGGAATTCCCTCCTTAT-CTTG 6024 Query 35648 ATCTTTTG-CTTCAGAGTTGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTT 35706 | ||||| ||| | | | | | ||||| | ||| || || | ||| || ||||| Sbjct 6023 AATTTTTGCCTTTACATTCTCAATAGTGTCAGATGGTTCGACATCAAGCGTAATGGTTTT 5964 Query 35707 ACCCGTCAAAGTTTTCACAAATATCTGCATT 35737 ||||| | |||||| || || || |||||| Sbjct 5963 TCCCGTTAGAGTTTTTACGAAAATTTGCATT 5933 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 450788229921240