Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmodium_20brasilianum_20[genbank_20GCA_5F001885115.2_202016-12- 01] 953 sequences; 30,089,869 total letters Query= NC_027364.1 Length=348113 Score E Sequences producing significant alignments: (Bits) Value seq306 86.0 1e-11 >seq306 Length=50732 Score = 86.0 bits (94), Expect = 1e-11 Identities = 131/187 (70%), Gaps = 0/187 (0%) Strand=Plus/Plus Query 6198 TTGTGCAATCATATGAGTTAGTAGTGAATAACTACTGATATTAAATGGAACTCCCAAAAA 6257 |||||||||||||||||| | || |||||| |||||||| || ||||| ||| Sbjct 47381 TTGTGCAATCATATGAGTGAATATTGAATAGGAGGCAATATTAAAAGGGACTCCTAAACC 47440 Query 6258 TAGATCAGCGGATCTTTGATGTAGAATGCAGCTTAGTTTCCCTTGTACTACACAAAATTG 6317 || |||| || ||||||| | ||| || || ||| || | | ||| ||||||| Sbjct 47441 TAAATCACATGACCTTTGATACATAATACATGATAATTTTCCATCAAAAACATAAAATTG 47500 Query 6318 TACAAAGCTATGACAAGGTGGCAACGTCATATCATCAAGCTCACCAACGTTCCATGCACT 6377 || |||||||||| || | | ||| | |||||| || ||| |||||||||| Sbjct 47501 GCATAAAATATGACAAGGAGGTAGTGCCATTTGATCAAGATCTTTAACATTCCATGCACA 47560 Query 6378 TAGAATA 6384 | |||| Sbjct 47561 CAAAATA 47567 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1113816799782744