Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmodium_20brasilianum_20[genbank_20GCA_5F001885115.2_202016-12- 01] 953 sequences; 30,089,869 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq27 91.5 2e-13 >seq27 Length=5678 Score = 91.5 bits (100), Expect = 2e-13 Identities = 160/230 (70%), Gaps = 6/230 (3%) Strand=Plus/Plus Query 110975 TACATGGTTTCAAAGATACGAGCATTCATCTCCTTGGCTTCATCTGAATCAAATGCGTAG 111034 ||||||||||| || || | ||||| ||| || |||||||| || ||| | | || Sbjct 1185 TACATGGTTTCGAATATTCTTCTATTCAACTCTTTAGCTTCATCCGACTCATAGGGATAT 1244 Query 111035 CGGCACAAAATAAATACATCCGCGAGACCTTGAACACCCAAACCAATAGGTCTGTGTCGC 111094 | | | ||||| ||| || | || |||||||| | ||| |||||||| || | | Sbjct 1245 CTCAAAAGCATAAAAGTATCTGCTAACCCCTGAACACCTATACCTATAGGTCTATGCCTC 1304 Query 111095 ATATTAG--ACTTTCGCGCAGTC-TCAACGGGATAAAAATTTCTGTCAATGACTCGGTTT 111151 | |||| ||||| || || | || || ||| ||||||| ||||| | | | | Sbjct 1305 TTGTTAGACACTTTGGC---TTCTTTAATAGGGTAATAATTTCTTTCAATTATTTTATCT 1361 Query 111152 AGATTTTTGGTAACAATCTTTGTGATTTCATGAAGTTTTTCATAATCAAA 111201 |||||| | |||| ||| ||||| ||||||| | ||||| | ||| ||| Sbjct 1362 AGATTTCTAGTAATAATTTTTGTAATTTCATATAATTTTTTAAAATTAAA 1411 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 628024518568800