Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmodium_20brasilianum_20[genbank_20GCA_5F001885115.2_202016-12- 01] 953 sequences; 30,089,869 total letters Query= NC_028955.1 Length=197361 Score E Sequences producing significant alignments: (Bits) Value seq723 123 3e-23 >seq723 Length=111701 Score = 123 bits (136), Expect = 3e-23 Identities = 314/464 (68%), Gaps = 29/464 (6%) Strand=Plus/Minus Query 136381 CAGGAAAGGGAATACTTGCTGTTGATGAATCTACAAATACTTGTGGGAAAAGATTGGCTA 136440 ||||||||||||| | || | |||||||||||| | || | ||| |||| | || Sbjct 87862 CAGGAAAGGGAATTTTAGCAGCTGATGAATCTACCCAAACAATTAAGAAGCGATTTGATA 87803 Query 136441 GTATTGGAGTAGAAAATACAGAGGCAAATAGA-CAGGCATACAGAGGTATGTTATT---T 136496 || | ||||||| || | | ||||||| | || || |||| | ||||| | Sbjct 87802 ACATACAAATAGAAAACACTGTTGAAAATAGAGCTAGC-TATAGAGACTTATTATTCGGT 87744 Query 136497 ACCACAGAGGGATTAGGTAA--TTATATTAGTGGTGCTATCTTATTTGAAGAAACACTAT 136554 ||| ||||||||||||| |||||| || |||| || || ||||||||||| ||| Sbjct 87743 GCCA---AGGGATTAGGTAAATTTATATCAG--GTGCGATTTTGTTTGAAGAAACCTTAT 87689 Query 136555 TTCAAGATCATGCTGATGGAGAAAGCATGATTGCAAA---GTTAGAGAAGCAAGGAATTA 136611 ||||| | ||| | |||| ||| | | ||| ||| | || ||||||| | Sbjct 87688 TTCAAAAAAATGAAGCGGGAG-TTCCAT--TAGTAAATTTATTACATAATGAAGGAATAA 87632 Query 136612 TACCAGGTATCAAGGTAGATAAAGGATTA-AAACCATTAGTTGGTGCATTAGAGCATGAG 136670 ||||||| || || || |||||||| ||| | ||||| | || | ||| |||| Sbjct 87631 TACCAGGAATAAAAGTTGATAAAGGTTTAGTATCCATTCCAT-GTAC---AGATGATGAA 87576 Query 136671 ACATATTGTTCTGGATTAGATGGTCTAACAGAAAGAGCAAGTGACTATTATGGTAGAGGT 136730 | || ||||||||||| || |||| ||| | || |||||| | || Sbjct 87575 AAATCAACACAAGGATTAGATGGGTTAGCAGATAGATGTAAAGAATATTATAAAGGTGGA 87516 Query 136731 GCAAGATTTGCTAAGTGGAGAGCAGTTCTACAAATT---ACAGAAGATGGA---CCTTCT 136784 ||||| |||||||| |||||||| ||| || |||| || | | | ||| ||| || Sbjct 87515 GCAAGGTTTGCTAAATGGAGAGCTGTTTTAGTAATTGACACTGCAAAAGGAAAGCCTACT 87456 Query 136785 GATCTTGCCATTAGAGAAAATGCATGGGGTCTTGCTAGATATGC 136828 ||| | | |||| |||| |||||||| | ||||||||||| Sbjct 87455 GATTTATCTATTAAGGAAACGGCATGGGGGTTAGCTAGATATGC 87412 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 631419678123480