Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmodium_20brasilianum_20[genbank_20GCA_5F001885115.2_202016-12- 01] 953 sequences; 30,089,869 total letters Query= NC_032001.1 Length=327147 Score E Sequences producing significant alignments: (Bits) Value seq124 105 1e-17 >seq124 Length=28153 Score = 105 bits (116), Expect = 1e-17 Identities = 145/203 (71%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 282897 TGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGT 282956 ||||| ||| |||||||| ||||||||||| | | || | ||||| |||| |||| Sbjct 11561 TGTAAAGTGGACTCTTTTTGAATGTTGTAGTCTGATAATGTTCTACCATCTTCTAATTGT 11620 Query 282957 TTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTT 283016 || || ||||| || || | ||||| ||| ||||| || ||||||||||| || ||| Sbjct 11621 TTTCCTGCAAATATTAATCTCTGTTGATCAGGTGGAATTCCTTCCTTGTCTTGAATTTTT 11680 Query 283017 GCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTC 283076 || || || | || || || || || | || || || || || || || || || || Sbjct 11681 GCCTTAACATTCTCAATGGTATCTGATGGCTCAACATCAAGTGTTATTGTTTTTCCTGTT 11740 Query 283077 AAAGTCTTAACGAATATCTGCAT 283099 || || || || || || ||||| Sbjct 11741 AATGTTTTTACAAAGATTTGCAT 11763 Score = 96.9 bits (106), Expect = 7e-15 Identities = 136/191 (71%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 282909 TCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAG 282968 |||||||| |||||||| || | | || | ||||| |||| |||||| || ||||| Sbjct 11345 TCTTTTTGAATGTTGTAATCCGACAATGTTCTTCCATCTTCTAATTGTTTTCCTGCAAAT 11404 Query 282969 ATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTA 283028 || || | ||||| ||| ||||| || ||||||||||| || || || || || | Sbjct 11405 ATTAATCTCTGTTGATCAGGTGGAATTCCTTCCTTGTCTTGTATTTTAGCCTTAACATTC 11464 Query 283029 TCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACG 283088 || || || || || | || || || ||||| || || || || || || || || || Sbjct 11465 TCAATGGTATCTGATGGCTCAACATCAAGAGTTATTGTTTTTCCTGTTAATGTTTTTACA 11524 Query 283089 AATATCTGCAT 283099 || || ||||| Sbjct 11525 AAGATTTGCAT 11535 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1046726418987262