Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmodium_20chabaudi_20adami_20[genbank_20GCA_5F900095565.1_202016- 11-23] 661 sequences; 19,350,400 total letters Query= NC_003038.1 Length=212482 Score E Sequences producing significant alignments: (Bits) Value seq13 91.5 2e-13 >seq13 Length=2809497 Score = 91.5 bits (100), Expect = 2e-13 Identities = 135/190 (71%), Gaps = 6/190 (3%) Strand=Plus/Minus Query 73930 ATGGAGATATACTAGTGCTAAATAGACAACCTACTTTACATAAAGCATCAATGATGGCTC 73989 |||| ||||| || | | ||||||||||| |||||||| ||||| ||| || Sbjct 1679647 ATGGTGATATTGTATTATTTAATAGACAACCATCTTTACATCGTATGTCAATTATGTGTC 1679588 Query 73990 TTCGAGTTAAAATTATGGATGTAAAAACCTTTAAATTTAATCT---TGCATGCACTAAAC 74046 | || | | |||||||| ||||| ||| |||||| || ||| | | | Sbjct 1679587 ATAAAGCTCGAGTTATGGATTATAAAACATTTCGCTTTAATGAATGTGTATGTAGT---C 1679531 Query 74047 CATATAATGCAGATTTTGATGGAGATGAAATGAATGCTCATGCGCCTCAATCAGAAGAAA 74106 |||||||||||||||||||||| |||||||||||| |||| |||||| | |||||| Sbjct 1679530 CATATAATGCAGATTTTGATGGGGATGAAATGAATTTACATGTACCTCAAACCGAAGAAT 1679471 Query 74107 GTAAAGCTGA 74116 || ||| || Sbjct 1679470 CTAGAGCAGA 1679461 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 679808783033520