Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmodium_20chabaudi_20adami_20[genbank_20GCA_5F900095565.1_202016- 11-23] 661 sequences; 19,350,400 total letters Query= NC_007921.1 Length=147544 Score E Sequences producing significant alignments: (Bits) Value seq6 87.8 2e-12 >seq6 Length=831307 Score = 87.8 bits (96), Expect = 2e-12 Identities = 149/211 (71%), Gaps = 4/211 (2%) Strand=Plus/Minus Query 131026 ACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATC-GCTCATGGTGCGCGAGTCCTC 131084 ||||| |||| ||||| || |||||||||||||| || | | || | | | || || Sbjct 381363 ACTAAGTGTAAAGTCGATTCTTTTTGAATGTTGTAGTCAGATAGTGTTCTACCA-TCTTC 381305 Query 131085 TAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGT 131144 || || || || || | ||||| | || || || ||||| || |||||||| || Sbjct 381304 TAATTGTTTTCCGGCAAAAATTAATCTTTGTTGATCAGGAGGAATACCTTCTTTATCTTG 381245 Query 131145 GATTTTCTGCTTGAGC-TGCTCCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTT 131203 |||||| |||| | | | || | ||||||| | || | || | || | |||| Sbjct 381244 GATTTTA-GCTTTAACATTTTCAATGGTATCGGATGGTTCAACATCAAGAGTGATTGTTT 381186 Query 131204 TACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 | ||||||| ||||||||||||||||||||| Sbjct 381185 TTCCGGTTAAAGTTTTTACGAAAATCTGCAT 381155 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 472008899994240