Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmodium_20chabaudi_20adami_20[genbank_20GCA_5F900095565.1_202016- 11-23] 661 sequences; 19,350,400 total letters Query= NC_008725.1 Length=111953 Score E Sequences producing significant alignments: (Bits) Value seq6 96.9 2e-15 >seq6 Length=831307 Score = 96.9 bits (106), Expect = 2e-15 Identities = 165/238 (69%), Gaps = 6/238 (3%) Strand=Plus/Plus Query 21834 ATGCAAATATTTATTAAAACATTAACGGGCAAAACCATTACCGTGGAAACGGAAGCCGCA 21893 |||||||| ||| | ||||||||||| || ||||| ||||| | || ||| | || Sbjct 381383 ATGCAAATCTTTGTAAAAACATTAACCGGAAAAACAATTACTCTTGATGTTGAACCATCA 381442 Query 21894 GAAACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAGGGTGT---ACCTGTAAAC 21950 || || | | | |||| |||||| |||||||| ||| | ||||| | Sbjct 381443 GATACTATTGAAAACGTTAAAGCTAAAATTCAAGATAAAGAAGGTATCCCACCTGATCAG 381502 Query 21951 CAACAGAGACTTATCTTTGCTGGCAAACAACTAGAAGATTTAAAAACTATGGCCGATTAC 22010 |||| || | || |||||||| |||||| ||||||| | ||| | | |||||| Sbjct 381503 CAAC---GATTAATTTTTGCTGGAAAACAATTAGAAGACGGTAGAACATTATCTGATTAC 381559 Query 22011 AATATTCAGAAGGAATCTACTCTTCATATGGTATTACGTTTACGAGGAGGATATTAAT 22068 |||||||| || |||||||| | ||| | || ||| | ||| ||||||| | |||| Sbjct 381560 AATATTCAAAAAGAATCTACCTTACATTTAGTTTTAAGATTAAGAGGAGGTTGCTAAT 381617 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 358121914968994