Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmodium_20chabaudi_20adami_20[genbank_20GCA_5F900095565.1_202016- 11-23] 661 sequences; 19,350,400 total letters Query= NC_014765.1 Length=198519 Score E Sequences producing significant alignments: (Bits) Value seq7 419 3e-112 seq8 235 7e-57 seq10 172 7e-38 seq6 167 3e-36 seq9 102 1e-16 seq14 96.9 4e-15 seq13 95.1 2e-14 >seq7 Length=1057013 Score = 419 bits (464), Expect = 3e-112 Identities = 1104/1657 (67%), Gaps = 50/1657 (3%) Strand=Plus/Plus Query 6517 ATAACAGTAGTTTTCGAGACCATTCTTCGCCTCGAC-CTTTTTCGCGTACTTT--TCATC 6573 ||| || |||||||| |||| || | || || | |||||| || ||| ||||| Sbjct 688853 ATAGCAATAGTTTTCAAGACTGTTTCTTGCTTCAATTCTTTTTT---TATTTTCTTCATC 688909 Query 6574 TTCATCTTTATACTTTTCCGCATCTTGGACCATCTTTTCAATGTCTTCTTTCGATAATCT 6633 ||| ||||||| ||||| ||||| | ||||| | ||||| ||||| |||||||| Sbjct 688910 TTCTGCTTTATATTTTTCAGCATCATTAACCATTCTATCAATTTCTTCAGGAGATAATCT 688969 Query 6634 CCCCTTATCATTCGTAATCGTAATCT--TTTCGGATTTACCCGAGGCCTTATCTTCAGCA 6691 || || ||||| ||||| || || | ||| | |||||| | || || |||| Sbjct 688970 ACCTTTGTCATTAGTAATTGTGATATGATTTTG--TTTACCAGTACTTTTTTCAACAGCT 689027 Query 6692 CTTACATTCAAAATACCATTTGCATCAACATCGAACCTTACATTAATTTGTGGTGTACCC 6751 | ||||| || ||||| |||||||| | ||| || | || | ||||||||| Sbjct 689028 GTGACATTTAAGATACCGTTTGCATCGATATCAAAGGTAACTTCAATTTGTGGGACTTTT 689087 Query 6752 CTCGGTGCGGCTGGAATACCCGTTAAATCAAATGTACCAAGTAAACTGTTATCCGTCGCC 6811 || || || | ||||||||| ||||| |||| |||| | ||| | ||||| | | Sbjct 689088 CTAGGAGCAGGTGGAATACCATCTAAATGAAATTTACCTAATAAGTTATTATCTTTGG-- 689145 Query 6812 TT----CTTACGTTCACCTTCATAGACTTTAATTGTCACCGCAGGTTGATTATCTTGTGC 6867 || || | ||| |||||||| |||| ||| ||| | ||||||||||| Sbjct 689146 TTAAGGCT--CTTTCTCCTTCATATACTTGTATTAACACACCTGGTTGATTATCAGCATA 689203 Query 6868 CGTTGAGAAGATTTGTTCTTTCTTAGATGGAATCGTCGTATTTCTCGGAATAACCGGGGT 6927 || | |||||||| ||| || | |||||| || ||||| || ||| | || Sbjct 689204 GGTAGTAAAGATTTGACTTTTTTTGGCTGGAATTGTTGTATTCCTTTCAATTAATTTTGT 689263 Query 6928 CATAATACCACCCATAGTTTCGAGTCCAAGAGACAGAGGTGTCACGTCCAAGAGTAACAG 6987 ||||| ||| || |||||| | ||| | ||| | | || || || | ||| | Sbjct 689264 CATAACACCTCCTGCAGTTTCTAATCCTAAAGATAAGGAACAGACATCTAATAATAATAA 689323 Query 6988 GTCTTGAACAG-ATTCGTTCCCTTCACCCGTTAAGATGGCGGCTTGGACCGTCGCCCCGT 7046 ||||| || | ||| | | | |||| | ||| |||||||||||||| | || || | Sbjct 689324 ATCTTGTACTGCATTGGATTGAT-CACCTGATAAAATGGCGGCTTGGACAGCAGCACCAT 689382 Query 7047 ATGCGACCGCCTCATCGGGGTTAATCGTTTT--ATTCAGTTCTTTACCGTTAAAATAATC 7104 | || || || ||||| || || || | | | || | ||||||||| ||||| | || Sbjct 689383 AAGCAACAGCTTCATCAGGATTGATTGATCTGCATGC--TTCTTTACCATTAAAGAATTC 689440 Query 7105 CGATAACATTTGTTGAATTTTCGGGATTCGTGTCGATCCACCGACCAAAACGATTTCATT 7164 || | | ||||||||| || |||| ||| |||||||| || || || | ||||| Sbjct 689441 TTTTATTAATGTTTGAATTTTTGGAATTCTTGTAGATCCACCAACTAAGACAACTTCATG 689500 Query 7165 CACTTTCGATTTATCGATCTTTGAGTCTCGAAGTGTTTTTTCGACAGGT-TCCATACATT 7223 || || ||| || ||| | | ||| | |||||| |||||| | || || Sbjct 689501 AACACTCTTTTTGTCCATCATGGCATCTTTTAAAACTTTTTCAACAGGTATTAATGTATC 689560 Query 7224 TACGGAACAAGTCCATACACAGTTCCTCAAAACGTGCACGGGTAATGGATGTATAGAAAT 7283 | | || |||| ||||| | ||| ||||| | || | ||| | | | ||| Sbjct 689561 T-CTAAAATAGTCAATACATAATTCTTCAAATCTAGCTCTACTAACTGTTACACTATAAT 689619 Query 7284 CAACGCCGTCGTATAACGAATCAATTTCAATGGTTGTTTGTGCCGTCGAAGATAACGTTC 7343 ||| || || | | |||||||||||||| |||| ||| | | |||||||| || | Sbjct 689620 CAATACCTTCAAAAAGAGAATCAATTTCAATTGTTGCTTGAGTTGAAGAAGATAAGGTAC 689679 Query 7344 GCTTTGCGCGCTCACACGCCGTTCGTAAACGACGAAGGGCACGCGGGTTACCGGAAATAT 7403 | ||||| | ||||| |||| ||| | | | || | || || | || Sbjct 689680 GTTTTGCTCTTTCACATTGTGTTCTTAATCTTCTTAAAGCTCTACTATTTTTTGATAAAT 689739 Query 7404 CTTT--CT-TATGTTTACGTTTAAACTCTTC---AGAGAAGTGT-CGAAGGAGTCTCGAA 7456 |||| || ||| ||| | |||||| ||||| | | |||| | | || || | Sbjct 689740 CTTTGCCTCTATTTTTTCTTTTAAAATCTTCGACACAAAAGTTTACTAAACGGTT----A 689795 Query 7457 TCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCT 7516 || |||||||||||||| || || ||||| || || || ||||| ||||| || ||||| Sbjct 689796 TCAAAATCTTCACCACCTAAATGGGTATCTCCTGCTGTTGCTTTAACTTCGAATATACCA 689855 Query 7517 CCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACG 7576 ||||||| | | || ||||||||||| |||||||| || | || ||||| | | Sbjct 689856 TCTTCAATAGTAAGTAATGAAACATCAAAAGTACCACCTCCTAAATCGAAAATTAAAATA 689915 Query 7577 TTCGTATCGTCGTCTTTG---TTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGT 7633 || | || || ||||| || || | | ||| || || ||||| || || |||||| Sbjct 689916 TTTTTTTC-TC--CTTTGCCTTTTTTGTGTAAACCATATGCAATAGCTGCTGCAGTTGGT 689972 Query 7634 TCATTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGT 7693 ||||| ||||| | | | || | || ||||| || | |||||||| || ||||| Sbjct 689973 TCATTTATAATTCTCATAACATTTAATCCTGCAATTGTACCAGCATCTTTTGTTGCTTGC 690032 Query 7694 CGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCG 7753 | ||| ||||||||||| || || || || || | ||| || | | | || || Sbjct 690033 CTTTGAGAATCGTTAAAATATGCAGGTACTGTAATGACGGCATTTTTTATAGATTTTCCT 690092 Query 7754 AGATACGATTCCGCGATATCTTTCA-TTTTGGTAAGAACCATCGATGAAATCTCTTCAGC 7812 | | | | ||| || | ||||||| |||| |||| |||||| || ||||| ||||||| Sbjct 690093 AAAAAGGCTTCTGCATTTTCTTTCATTTTTTGTAA-AACCATAGAAGAAATTTCTTCAGG 690151 Query 7813 CGCAAACTGTTTCGTTTCACCGTTAAAATCAACTTCAATCATGGGTTTATCCGCAGCACC 7872 ||| ||| | ||||| | | || ||||||||||||| ||||| || || ||| Sbjct 690152 GTGAAATAATTTTTTCTCACCTTGATAAACAACTTCAATCATAGGTTTTTCTTCAATACC 690211 Query 7873 GGGGATAACCTTATACGACCAATCTTTCATATCGTCTTGGACCTGTTG-GTCCGAAAACT 7931 | | || || | | ||| | ||||||||| ||| | ||| | || | ||| | Sbjct 690212 TGATTTGACTGTAAATGGCCAGTGTTTCATATC-ACTTTGTACTGAAGATTCTGTAAATT 690270 Query 7932 TTCTTCCGATAAGACGCTTTGCATCAAAAACTGTGTTTTTGGGGTTCATGGCTGTTTGGT 7991 | ||||| || | | |||||||| || ||||| |||| || || | || ||| | Sbjct 690271 TCCTTCCTATTAATCTTTTTGCATCGAAGACTGTATTTTCTGGATTTCTTGCAACTTGAT 690330 Query 7992 TCTTCGCCGCGTCCCCGATAAGACGTTCATTATTTTCCGTAAACGCGACGTACGATGGGG 8051 | || || || || || || | | ||| || || || || || || || ||||||| Sbjct 690331 TTTTAGCTGCATCACCAATTAATCTTTCTGTA---TCAGTGAAAGCAACATAAGATGGGG 690387 Query 8052 TCGTTCGATTCCCTTGGTCGTTCGCAATAATTTCTACGCGGTCGTTTTGCCAGACGCCGA 8111 | |||| || ||||| ||||| ||||| || || || || ||| ||| || || | Sbjct 690388 TTGTTCTGTTACCTTGATCGTTAGCAATTATATCAACATTTTCATTTCTCCATACACCAA 690447 Query 8112 CGCACGAATACGTTGTTCCTAAATCAATACCGATTGC 8148 | || || || || || |||||||| ||||| || || Sbjct 690448 CACAGGAGTAGGTGGTACCTAAATCGATACCTATAGC 690484 >seq8 Length=1335007 Score = 235 bits (260), Expect = 7e-57 Identities = 835/1282 (65%), Gaps = 46/1282 (4%) Strand=Plus/Minus Query 6553 CTTTTTCGCGTAC-TTTTCATCTTCATCTTTATACTTTTCCGCATCTTGGACCATCTTTT 6611 ||||||| | || |||| ||||||||| | | ||||| ||||| | | ||| |||| Sbjct 741679 CTTTTTCTCTTAAATTTTTATCTTCATCAGCAAATTTTTCAGCATCGTTAATCATTTTTT 741620 Query 6612 CAATGTCTTCTTTCGATAATCTCCCCTTATCATTCGTAATCGTAAT--CTTTTCGGATTT 6669 | || | |||||| |||||||| || || ||||| ||||| || || |||| | ||| Sbjct 741619 CTATTTGTTCTTTTGATAATCTACCTTTGTCATTAGTAATAGTTATACCTTTACT--TTT 741562 Query 6670 ACCCGAGGCCTTATCTTCAGCACTTACATTCAAAATACCATTTGCATCAACATCGAACCT 6729 || | | |||||||| || |||| |||||||| ||| || ||| || | Sbjct 741561 TCCTGTTCCTTTATCTTCTGCTTCAACATGTAAAATACCGTTTTTGTCGACAGTAAATGT 741502 Query 6730 TACATTAATTTGTGGTGTACCCCTCGGTGCGGCTGGAATACCCGTTAAATCAAATGTACC 6789 || | |||| ||| ||| || |||| | ||||||||| | ||| |||||| | || Sbjct 741501 AACCTCGATTTTAGGTACACCTCTTTGTGCAGGTGGAATACCAGATAATTCAAATTTTCC 741442 Query 6790 AAGTAAACTGTTATCCGTCGCC--TTCTTACGTTCACCTTCATAGACTTTAATTGTCACC 6847 | |||| |||||| | | | || | ||| |||||| |||||| |||| || Sbjct 741441 TAATAAATGGTTATCTTTAGTTAATGCT--CTTTCTCCTTCAAAGACTTGAATTAAAACA 741384 Query 6848 GCAGGTTGATTATCTTGTGCCGTTGAGAAGATTTGTTCTTTCTTAGATGGAATCGTCGTA 6907 || ||||| |||||||| ||||| ||| ||||| ||| || | ||| || ||| Sbjct 741383 GCTGGTTGGTTATCTTGATAGGTTGAAAAGGTTTGTGATTTTTTTGTTGGGATAACTGTA 741324 Query 6908 TTTCTCGGAATAACCGGGGTCATAATACCACCCATAGTTTCGAGTCCAAGAGACAGAGGT 6967 ||||| ||| | | |||||||||||||| | |||||| | || | || | || Sbjct 741323 TTTCTTTTAATTAATTGAGTCATAATACCACCAACAGTTTCAATACCTAAAGTTAATGGA 741264 Query 6968 GTCACGTCCAAGAGTAACAGGTCTTGAACAGATTCGTTCCCTTCACCCGTTAAGATGGCG 7027 || || || || | || | ||||| | ||| |||| || | || | Sbjct 741263 GTAACATCTAACAATACAACATCTTGTA---ATT------CTTCTCCTAAAATAATACCA 741213 Query 7028 GCTTGGACCGTCGCCCCGTATGCGACCGCCTCATCGGGGTTAATCGTTTTATTCAGTTCT 7087 ||||| | | || || ||||| || || ||||| |||||||| | |||| ||||| Sbjct 741212 GCTTGAATAGCAGCACCATATGCTACGGCTTCATCTGGGTTAATACCTCTATTGGGTTCT 741153 Query 7088 TTACCGTTAAAATAATCCGATAACATTTGTTGAATTTTCGGGATTCGTGTCGATCCACCG 7147 ||||| || ||| | || | |||||||||||||| || || || || || || || Sbjct 741152 TTACCATTGAAAAACTCTTTAATAATTTGTTGAATTTTAGGTATACGAGTTGAACCTCCT 741093 Query 7148 ACCAAAACGATTTCATTCACTTTCGATTTATCGATCTTTGAGTC-TCGAAGTGTTTTTTC 7206 || ||||| ||||||| | ||| ||| || |||| || || || | ||||| Sbjct 741092 ACTAAAACAATTTCATCGATTTTGCTTTTTTCATATTTTGCATCATCTAA-TACTTTTTT 741034 Query 7207 GACAGGTTCCATACATTTACGGAACAAGTCCATACACAGTTCCTCAAAACGTGCAC-GGG 7265 |||||||| | | || | || || || | | ||| ||||| || | | Sbjct 741033 AACAGGTTCTAAAGTTTCTCTAAATAAATCATCATTTAATTCTTCAAATTTGGCTCTTGT 740974 Query 7266 TAATGGATGTATAGAAATCAACGCCGTC--GTATAACGAATCAATTTCAATGGTTGT-TT 7322 ||||| | | | || | | || || |||| | ||||||||||| |||| || Sbjct 740973 TAATGTTTCT-GAAAAGTTATGTCCTTCAACTATATC--TTCAATTTCAAT--TTGTGTT 740919 Query 7323 GTGCCGTCGA-AGATAACGTTCGCTTTGCGCGCTCACACGCCGTTCGTAAACGACGAAGG 7381 | | | | ||||| ||| ||||| ||| | ||| ||| ||| Sbjct 740918 GAGTGAACAACTGATAAGTTTCTTTTTGCAATTTCAACTTCTTTTCTTAATTTTTGAATA 740859 Query 7382 GCACGCGGGTTACCGGA---AATATCTTTCTTATGTTTACGTTTAAAC-TCTTCAGAGAA 7437 || | ||| | || || |||| | |||| ||| ||||||| | || | | || Sbjct 740858 GCTC---TTTTATCTGATCTAAGATCTATATTATTTTTTTTTTTAAACATTTTTATAAAA 740802 Query 7438 GTGTCGAAGGAGTCTCGAATCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGC 7497 ||| | | ||| ||| ||||||||||| || ||||| |||| || || || || Sbjct 740801 TAGTC-CATAACTCTTTGATCAAAATCTTCACCTCCTAAGTGAGTATTACCTGCTGTTGC 740743 Query 7498 TTTGACTTCAAAGATACCTCCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACC 7557 | ||||||||| | ||| ||||| ||| | ||||||||||| |||||||| || Sbjct 740742 ATAGACTTCAAATACACCATTATCAATAACTAAAATAGAAACATCAAAAGTACCACCTCC 740683 Query 7558 CAGGTCAAAAATGAGTACGTTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGAT 7617 | || | | | | | || |||| || ||||| | ||| || || | Sbjct 740682 TAAATCGTATACTAAAATACTTGT------TTCTTCTTTTTTATCTAAACCATAAGCTAA 740629 Query 7618 AGCCGCCGCCGTTGGTTCATTAATAATACG-AAGACAGTTCAGGCCAGCAATAGTTGCCG 7676 ||| || || || ||||||||||||||||| | || | || | |||||||| | | | Sbjct 740628 AGCAGCAGCGGTGGGTTCATTAATAATACGTACGATA-TTTAATCCAGCAATTGCACCAG 740570 Query 7677 CATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGT 7736 ||||||| || ||||||| ||| | ||| || || || || || || || || || || | Sbjct 740569 CATCTTTTGTAGCTTGTCTTTGTGCATCATTGAAATATGCAGGTACAGTAACAACAGCAT 740510 Query 7737 CCGTGACTTTCTTACCGAGATACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCG 7796 | || ||||| | | | |||| || || ||||||||||| | |||||| | Sbjct 740509 TTTTTACGGGTTTACCCAAAAATGATTGAGCAATTTCTTTCATTTTTTCTAAAACCATAG 740450 Query 7797 ATGAAATCTCTTCAGCCGCAAA 7818 ||| | ||||| ||||| Sbjct 740449 CACTAATTTGTTCAGGTGCAAA 740428 >seq10 Length=1513010 Score = 172 bits (190), Expect = 7e-38 Identities = 555/847 (66%), Gaps = 22/847 (3%) Strand=Plus/Minus Query 115062 ATAATCACCGACGCGCTTTTCAAAAAAGTTTGTTTTGCCGTCGAGTGATATATTCTCCAT 115121 |||||| | || | ||||||||| || |||||||| || | | ||||| ||||| Sbjct 1394750 ATAATCTGCAACTCTCTTTTCAAAGAAATTTGTTTTTCCTTGTAAAGATATTAAGTCCAT 1394691 Query 115122 AAAATCAAAGGGATTTTTCGTGTTCCAGATTTTATTGTGACCCACTTGTTTTGATAATCG 115181 || ||| |||||||| | | | | ||| ||| | || | ||||||| Sbjct 1394690 CCAACTAAATGGATTTTTTGAATGGAAAACTTTGGAACAACCTAAACATTCTAATAATCG 1394631 Query 115182 ATCCGCAACATATTCGATATACTCCGACATTTTACCGGAATTCATACCTATGAGACTACA 115241 ||| |||||| |||| || || | ||||| | |||||||| || || | | ||| Sbjct 1394630 ATCAGCAACAAATTCAATGTATTGAGACATAAGTCTTGAATTCATTCCAATTAAATCACA 1394571 Query 115242 CGGAAGTGCGTCCGTAATGAATTCTTTTTCGATTGAAACGGCGTCTCTTATAATTTCTTC 115301 || | | || ||| ||| | |||| | | ||| || ||| | | || | || Sbjct 1394570 AGGTAAAGATTCACAAATAAATGATCTTTCTACTTCAACTGCTTCTTTAACTATATTTTG 1394511 Query 115302 AATTGTATTTTGAGATGGTTTGTTTTTTAACATGTTGAATAATTCAACCGC--AAATTCT 115359 || | || | | ||| |||| | || | | |||| | || | ||| ||| Sbjct 1394510 AACAACCTCTTCTGGTAATTTATTTTCCAGCAAGCT--ATAAATTAAGCAATTAAAATCT 1394453 Query 115360 TGGTGCATACCTTCATCTCGACTTATGAGTTCATTACTAAAACATAAACC-TGGAAGTAA 115418 ||| | |||||||||| ||| || | |||||||||||| |||||| || || | | Sbjct 1394452 GTGTGTAATCCTTCATCTCTACTAATCAATTCATTACTAAATGTTAAACCATGTAATTTA 1394393 Query 115419 CCCTCTCTTTTTTAACCAAAAAATAGCACAAAAACTACCCGAGAAGAATATACCTTCAAC 115478 | | ||||| |||||||| || ||||||||||| || || ||||| ||||| || Sbjct 1394392 TTTTGT-TTTTTAAACCAAAATATTGCACAAAAACTTCCACTAAATAATATTCCTTCGAC 1394334 Query 115479 ACACGCAAAGGCTAATAAACGTTCAGCAAATGG--TCGTTTCTTATCAAACCACTTCATA 115536 ||| ||| |||| | | ||||||||| | |||| || | | | ||| || Sbjct 1394333 ACATGCATTAGCTACAATTCTTTCAGCAAAAGAGTTCGTATCATTT--ATCCATTTAGCT 1394276 Query 115537 GCCCATTTCGCCTTTCTTTCGATACACGGAATTGTTTGAATTGCTTCGAATAATTGTT-- 115594 |||||| || || ||| || || || ||| ||| || | ||||| | | Sbjct 1394275 GCCCATAATGCTTTATTTTTTATTGCTGGTATATTTTCAATAGCATGAAATAAATTTAAT 1394216 Query 115595 -TCT-TTTCGCTAGAATTTTTTATATACTTGTCTATGAGTTTACTGTACGTTTCACCGTG 115652 ||| |||| | || | ||||| || || || | | ||| || |||||| ||| Sbjct 1394215 CTCTCTTTCTC----ATCCCTAATATAATTATCAATTAATAAACTATAGGTTTCAGAGTG 1394160 Query 115653 TACCATTTCATTGTGAGATTGATAGGCATAAAATGATCGAGCCTCCGTAAGTTGTATTTC 115712 || ||||| |||| | |||||||| | || || | | ||||| ||| Sbjct 1394159 TATATTTTCAACAGCTATTTGAAAAGCATAAAACTTTTTGGCTTCAATTATTTGTACTTC 1394100 Query 115713 ATCTGCAAAATT-ATTATTTATATTTTCAAAAACTATACCATCAGAACCAGCaaaaaaaG 115771 ||| |||||| | || || |||||| || ||||| |||||| | | |||||||| | Sbjct 1394099 -TCTTAAAAATTTACTAGCTAAATTTTCTAATACTATTCCATCACTAGCTGCAAAAAATG 1394041 Query 115772 CTAAAATATATTTTATAAAATGTTTTTCATTATCACTTAATTCATTCCAA-TCATCCATA 115830 ||| | || |||||||||||| |||||||| || |||||| ||| || || | || | Sbjct 1394040 CTAGCACATGTTTTATAAAATGCTTTTCATTTACATTTAATT-TTTCAAAGTCTTTCAAA 1393982 Query 115831 TCTTTGGAAAAGTCTATCTCTTCAGCGGTCCAATTTGACATTTGGGCCTTTTTATACAAA 115890 || | || || ||||| |||||||| |||||| ||| | || |||||||| ||| Sbjct 1393981 TCACTTGATAAATCTATTTCTTCAGCAGTCCAAAATGAGGCCTCAGCTTTTTTATAAAAA 1393922 Query 115891 GTCCATA 115897 |||||| Sbjct 1393921 TTCCATA 1393915 >seq6 Length=831307 Score = 167 bits (184), Expect = 3e-36 Identities = 971/1541 (63%), Gaps = 43/1541 (3%) Strand=Plus/Minus Query 104470 TGGTCTATATACACACCTCTATCCGCCGCCATATCGATGATTGTTTTTTGACTCATTTCC 104529 ||||| || | | ||| | ||| || |||||||| || || ||||||| | |||||| Sbjct 424673 TGGTCAATGAAAATACCACGATCAGCAGCCATATCAATAATATTTTTTTGTTTGATTTCC 424614 Query 104530 CATACGGTTTTATACAATTCCTTAAGATCATCGGGTATATCAATAATGTTTTGAACAGAC 104589 || |||||||||||||| || || | ||| ||||| || |||| | ||||||| Sbjct 424613 CAAACGGTTTTATACAACTCTTTCAAGTCACTAGGTATTTCGCTAATATATTGAACACTT 424554 Query 104590 CCATTTGCCTTCACCATAA---GATCTTTCATTTCCTTCGACCAGAGTCCACGTTCTTTC 104646 ||||| | | || | | | |||||| || | ||| || || ||| || Sbjct 424553 CCATTA---TGGGCAATTAATTGTTGTTTCATATCTTCATCCCAAAGACC----TCTATC 424501 Query 104647 AAA----TCGTTTACTAAATGTTTGTTTACGACGACAAATTCACCCGCGAGTGTTCGTCT 104702 ||| || |||| ||||| || ||||| | |||||||| | ||||| Sbjct 424500 AAAAAGATCTTTTAACAAATGAGGATTAACGACAAAGAATTCACCACTTAAAACACGTCT 424441 Query 104703 CAAATAGATATTGGTCGTATACGGTTCGAAACACTCGTTGTTCCCTAAAATCTGGGATGT 104762 |||| || || | ||||| ||||| || | || || || |||||||| || || || Sbjct 424440 GTAATAAATGTTACTTGTATATGGTTCAAAGGATTCATTATTTCCTAAAATTTGTGAAGT 424381 Query 104763 GGATGCGGTAGGCATAGGTGCAAGAAGAAGACTATTCATAGTTCC----TTTCTTAACAA 104818 || || || ||||||||||| | ||||||| ||| | ||| || |||| Sbjct 424380 TGAAGCTGTTGGCATAGGTGCTAAAAGAAGAGAATTTCTTAATCCATGTTTACTTATTTT 424321 Query 104819 GTTTACGCATGGCATTCCAATCG---TATCGACCACTAAACTTTGGGTCTCGATCCCACA 104875 ||| || || |||||| ||| | | | ||||| | || ||||| Sbjct 424320 TTTTTTTAATAA-ATCCCAATCCCAATATTTATTA-TCTACTTTTGC-----ATTCCACA 424268 Query 104876 TATCGAATTGAAGAATACCTTTACTAAACGGTGACCCCTTAAACGTTTCATAAGGACCGT 104935 |||| ||||| | || |||| || || || | | | | |||||| || || Sbjct 424267 TATCAAATTGTAATATTCCTTGGCTTGCTGGACTACCTTGATATGATTCATATGGTCCAC 424208 Query 104936 ACATTTCGGCAAGTTCACACGACGATTCGAGTGATGCGTGGTAGATAGTTTCGAATATAT 104995 | || || | |||| ||| ||| | | || | || |||||||| ||||| Sbjct 424207 TTACTTGTGCCAATTCAACAGACATTTCTAAAGCAGCATAATACATAGTTTCAAATATTC 424148 Query 104996 CAATGTTGAGTTTTCTCGATTCTTCTGAACCGAATGTCATTCTTAACATGATAAACACGT 105055 | || | || | | | |||||| || | ||| |||||| | ||||| | Sbjct 424147 TTCTATTTAATTCTTTAGCTTCTTCAGATTCATATGGATATCTTAAAAGCATAAATGTAT 424088 Query 105056 CAGCGAGACCCTGAACACCAATACCGATGGGTCTGTGACGCATATTTGAACGTTTCCCGT 105115 | || | || || || || || || || ||||| || | ||||||| | || | | Sbjct 424087 CTGCTAATCCTTGTACTCCTATTCCAATAGGTCTATGCCTTTTATTTGATCTTTCAGCTT 424028 Query 105116 TTTCGGTTGGGTAAAAGTTTTTATCAATAACCTTGTTTAAGTTACGTGTAACCATTTTCG 105175 || ||| ||| | ||| | ||||||| || | ||| || | |||| ||||| | Sbjct 424027 CTTTAACTGGATAATAATTTCTTTCAATAATTTTATCTAAATTTCTAGTAATAATTTTAG 423968 Query 105176 TAACACGATGTAACTCTTCATGGTTAAACTCGTTCTTCTCGACATCAACGTATTTTGGTA 105235 ||| | || ||| | || | ||||| || || || || |||||| |||| || Sbjct 423967 TAATATCATATAATTTTTTAAAATTAAATTCTTTTTTTTCTCTATCAACAAATTTGCATA 423908 Query 105236 ACGCGATTGATGCGAGATTACATACGGCGGTTTCTTCC--TTATCCGTAAACTCCAGAAT 105293 | || || || || | |||||| || || ||| || | || ||| | || | ||| Sbjct 423907 ATGCAATGGACGCTAAATTACAAACAGCTACTTCATCAGGTGAT--GTATATTCAATAAT 423850 Query 105294 TTCTGTACACAAATTTGATGATTTAATCGTACCAACGTGTTTATGGTTCGACTTTTCATT 105353 ||| ||| ||||| ||||||| || || | | ||| |||||||| || ||| Sbjct 423849 TTCACAACATAAATTACTACATTTAATTGTTCCTAAATTTTTTTGGTTCGATTTAGAATT 423790 Query 105354 ACACGCGTCTTTGTAAAGCATATATGGGGTTCCCGTTTCACTTTGGGATT-TAATAATTG 105412 ||| || ||||| || | ||||||||| || ||||| ||||| || ||||| | | Sbjct 423789 ACATGCATCTTTATATAACATATATGGTACACCAGTTTCTATTTGGCTTTGTAATA-TAG 423731 Query 105413 CTTTCCAAATCTCCGAAGCTGGTACAACTTTAGTTGCGATACCTTCAGATTCGTATTTCT 105472 | ||| | || || | || ||| | | | | ||| ||||||||| Sbjct 423730 CAAACCATAAATCTTGTGCAAGAACTGTTTTTTTGCCTAAATTTTCTTCTTCGTATTTTG 423671 Query 105473 CGTAAAGATCTTCAAACTCTTTACCGTACACGTCTGAAAGACCCTTTGCC--TGATCAGG 105530 || | | |||||| |||| ||| || || | | | | | | | | || ||| Sbjct 423670 TATATAATTTTTCAAATTCTTCACCC--CAAGTTTCACTTAAGCCTGGACATTCATTAGG 423613 Query 105531 ACAAAACAATGACCAATTACCATCGGATTCAACGCGTTTCATGAACAAATCTGGAATCCA 105590 || | || | ||| || || | || | |||||| || ||||| || | ||| Sbjct 423612 GCACATTAAAGTCCAGTTCTTATTTTCCTTTACTCTTTTCATAAATAAATCAGGTACCCA 423553 Query 105591 CATGGCTGAAAAGAGGTCTCGACACCTCGCCTCTTCATCACCTTGATTCAAACGAATTTC 105650 || || |||| | || ||| ||| ||||| | ||| ||||| | | || Sbjct 423552 AATAGCATAAAATAAATCACGAGCTCTCAATTCTTCTTTACCATGATTTTTTCTTAAATC 423493 Query 105651 GAGAAAATCGAGAATATCGGCGTGCCATGGTTCTAAATAGACTGCAATAGACCCTTTACG 105710 | ||| || | |||||| | ||||||||||| | ||| || |||| ||| ||||| | Sbjct 423492 TAAAAATTCAAAAATATCTGAATGCCATGGTTCAACATATACAGCAAAAGAACCTTTTCT 423433 Query 105711 A---CGCCCCGCTTGATTGACATATCTTGCGGTTGAGTTATACACTCGTAACATTGGAAT 105767 | || |||||| ||||||||||| || ||| | |||| ||||||||||| Sbjct 423432 TTTTCCTCCACCTTGATCTACATATCTTGCTGTATCATTAAAAACTCTTAACATTGGAAC 423373 Query 105768 AATACCATCGGATGTTCCATTTGTTCCACGAATATGTGATTTATTTGCACGTACATCGTG 105827 | ||||| ||| | ||||| ||||| | || | || || | | | | ||| || Sbjct 423372 TAAACCATTTGATATACCATTAGTTCCTCTGATGTAAGAATTTTGACCTCTAATATCTTG 423313 Query 105828 AACGTGTAACCCAATACCCCCAGCCCACTTACTGATACGCGCACACTCTTTTACTGTATC 105887 || | || ||||| || || ||||| || ||||| | |||| ||| || Sbjct 423312 TACAGCCACACCTATACCTCCTGCTGTTTTACTAATCAATGCACATTGCTTTAATGTTTC 423253 Query 105888 GTAAATACCGTCGATACTATCTTCCTT-ATTCGCAATCAGGAAACACGATGACATTTGTG 105946 | ||||| || || ||| || ||| ||| | || || || |||||||| | Sbjct 423252 AAATATACCTTCTATTGAATCAGATTTCATTGATAAT-AAAAAGCATGAAGACATTTGGG 423194 Query 105947 GTCTGGGTGTACCAGCATTGAACAGAGTTGGTGTTGCATGA 105987 |||| ||||| || | ||| || | || || || |||||| Sbjct 423193 GTCTTGGTGTTCCCGAATTAAATAATGTAGGAGTAGCATGA 423153 >seq9 Length=1302257 Score = 102 bits (112), Expect = 1e-16 Identities = 197/285 (69%), Gaps = 13/285 (5%) Strand=Plus/Plus Query 11444 TTTTCTTACCAATCGCATCAATTTCATCTATAAAGATAATACACGGTTGATTTTCACGTG 11503 ||||| | |||| |||||||||||||||||||| |||||| | ||| || || | || Sbjct 544340 TTTTCGT-CCAACAGCATCAATTTCATCTATAAAAATAATAGATGGTGCATGTTTTCTTG 544398 Query 11504 CCAATTCAAATATATCACGGACTCTTTTTGCGCCTACGCCTACAAACATTTCAACGAACG 11563 | | |||||| || | |||||| || || | || ||||| | ||||| || Sbjct 544399 CTTGTGCAAATAATTCTCTAACTCTTGATGGTCCGATTCCCACAAATACTTCAATAAA-- 544456 Query 11564 ATGACCCCGAACACTGA-----ATAAAAGGAACGGAAGATTCACCCGCTATAGCACGTGC 11618 || || | |||||| | ||||||||| || |||||| || | ||| ||| Sbjct 544457 ATCACTTC---CACTGATATTAAAAAAAGGAACATTAGCTTCACCAGCAACAGCTTTTGC 544513 Query 11619 TAAAAGTGTTTTACCTGTACCTGGTTTACCTGTTAATAATGCACCCCTTGGTATTTTAGC 11678 ||| | ||||| || || || ||| ||| |||||||||||| |||||||||| || Sbjct 544514 TAATAAAGTTTTTCCGGTTCCCGGTGCACCACATAATAATGCACCTTTTGGTATTTTTGC 544573 Query 11679 ACC-GGTACCAAAGTACTTTTCTGGCGCCTTGAGAAAATCAACAA 11722 ||| ||| | || ||| |||| || | ||||||||||| Sbjct 544574 ACCTAATACTTGA-TATTTTGCTGGATTTTTCAAAAAATCAACAA 544617 Score = 91.5 bits (100), Expect = 2e-13 Identities = 185/271 (68%), Gaps = 8/271 (3%) Strand=Plus/Minus Query 7456 ATCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACC 7515 ||| |||||||| || || || |||| || || ||||| || ||||| | ||| Sbjct 1081256 ATCAAAATCTTCTCCTCCTAAAGAGGTATTTCCATTTGTGGCTTTTACCTCAAAAACACC 1081197 Query 7516 TCCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTAC 7575 |||| || | ||| | ||||||||||| ||||| || || | |||| ||| || Sbjct 1081196 TCCTAATATTTCTAAAATTGAAACATCAAATGTACCTCCTCCTAAGTCATAAACAGCTAT 1081137 Query 7576 GTTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTC 7635 | || | || |||| |||| | ||| | || | ||| || || |||||||| Sbjct 1081136 GACTTTACCATCA-CTTTTTTCTAA-----ACCAAAAGCTAAAGCAGCTGCAGTTGGTTC 1081083 Query 7636 ATTAATAATAC-GAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTC 7694 ||||||||| | || ||| | || || ||||| | | |||||||| || ||||| | Sbjct 1081082 ATTAATAATTCTTAAAACA-TCTAGCCCTGCAATTTTACCAGCATCTTTTGTGGCTTGCC 1081024 Query 7695 GTTGCGAATCGTTAAAGTAGGCCGGGACCGT 7725 ||| ||||| ||||| || || || || || Sbjct 1081023 TTTGTGAATCATTAAAATATGCAGGTACAGT 1080993 >seq14 Length=1995265 Score = 96.9 bits (106), Expect = 4e-15 Identities = 253/382 (66%), Gaps = 13/382 (3%) Strand=Plus/Minus Query 22441 AAATTTTATCAGGCATCTACATCAGAGCTCTACGGTAAAGTAAATGAAACTCCA---CAA 22497 ||||||||| | || || ||||| || | || ||||| | | |||| | ||| Sbjct 438787 AAATTTTATAATGCTTCAACATCCGAATTATATGGTAATACTATTCAAACCGAATGTCAA 438728 Query 22498 AATGAAAATACACCGTTTTACCCGCGTTCACCATATGGGGTAGCTAAATTGATGGGATAT 22557 |||||||||||||||||| | || ||||| |||||| |||| ||||| | || Sbjct 438727 AATGAAAATACACCGTTTAATCCAGTCTCACCTTATGGGATAGCAAAATTATATAGCCAT 438668 Query 22558 TGGGCGACAGTTAATTATAGAGAATCATACGGTATGTTTGCATGCAATGGTATAATGTTC 22617 | ||| ||||||||||||||||| ||||||| ||||||||| | || Sbjct 438667 TATATAACAAAAAATTATAGAGAATCATATAATATGTTTTGTGTAAATGGTATATTATTT 438608 Query 22618 AACCACGAATCACCGAGACGGGGTGAAAACTTCGTGACACGAAAAATAACACTCGGTGTC 22677 || || ||| || ||||| ||||||| || || ||| |||||| ||| ||| | Sbjct 438607 AATCATGAAAGTCCAAGACGTGGTGAAACATTTGTTACAAAAAAAATTACAAAGGGTATA 438548 Query 22678 GCTAATATCAGTGCAGGTAAACAAAAATGTTTATACCTT-GGTAACCTAGATGCGAAACG 22736 || || || | | | || ||| ||| || || || || | ||| | | Sbjct 438547 GCAAAAAT-ATTTAAAAAAATTCAAACCGTTATTATATTAGGAAATATTGATACATTTAG 438489 Query 22737 AGATTGGGGTCATGCACGCGATTACG----TGAAATGTATGTGGAAAATATTACAACAAG 22792 |||||||||||||||| ||||| | || ||| ||| | ||| ||||||||| Sbjct 438488 AGATTGGGGTCATGCAAAAGATTATGTATATGCAATATATTT----AATGTTACAACAAA 438433 Query 22793 ATAAACCGGAAGATTTTGTTAT 22814 | || | ||||||||||| Sbjct 438432 CAACTCCTAATGATTTTGTTAT 438411 Score = 82.4 bits (90), Expect = 1e-10 Identities = 300/464 (65%), Gaps = 22/464 (5%) Strand=Plus/Minus Query 11232 TATTTCTTCACGTCCGTGAACATCAGGTAAAGAAACTTGTATTTTACGATCAAATCTACC 11291 ||||| || | |||| ||||| ||||| | || | || | | ||||||||| || Sbjct 1587002 TATTTTTTTTCTACCGTTTACATCTGGTAATGGGACATATACAATTCTATCAAATCTGCC 1586943 Query 11292 GGGGCGTAATAACGCATCGTCGAGTATATCGATACGGTTTGTTGCACCTATAACAACAAT 11351 ||| | | ||| ||| || | |||| || | || ||||| ||||| || | ||| Sbjct 1586942 GGGCCTAAGTAAAGCACTATCTAAAGTATCAATTCTATTCGTTGCCCCTATGACCATAAT 1586883 Query 11352 TT---CAGTTTCATTCTCGAAACCATCCATTTCTGTTAATAATTGGTTAATTGTTTGTTC 11408 | |||| | | || || ||||||||||| ||||||||| || | |||||| || Sbjct 1586882 ATGTACAGTAT--TGCTA-AATCCATCCATTTCAACTAATAATTGATTTAATGTTTGATC 1586826 Query 11409 ACGCTCATCGTTTGCC--GCAAACCCATT-----CA----TACTTCTTTTCTTACCAATC 11457 | | || | |||||| ||| ||||| || |||||| |||| || || Sbjct 1586825 ATGTTCTT--TTTGCCCTGCA---CCATTAGATGCACTAGTACTTCGTTTCCCTCCGATT 1586771 Query 11458 GCATCAATTTCATCTATAAAGATAATACACGGTTGATTTTCACGTGCCAATTCAAATATA 11517 |||||||||||||| ||||| | ||| ||||| | | || || ||||| Sbjct 1586770 GCATCAATTTCATCGATAAAAACAATTGACGGTGCAACTGATCGAGCATGGGAAAATAAT 1586711 Query 11518 TCACGGACTCTTTTTGCGCCTACGCCTACAAACATTTCAACGAACGATGACCCCGAACAC 11577 | | || ||||||||| ||| |||||| | ||||| | || | ||| || Sbjct 1586710 TGCCTGATTCTTTTTGCTCCTTGACCTACATATATTTCTATAAATTCAGGCCCAGATGTA 1586651 Query 11578 TGAATAAAAGGAACGGAAGATTCACCCGCTATAGCACGTGCTAAAAGTGTTTTACCTGTA 11637 | ||| | || || || ||| |||| || || |||| | |||||||| | Sbjct 1586650 TATATATATGGGACATTAGCTTCTGTAGCTACTGCTCGAGCTAGCATAGTTTTACCAGAT 1586591 Query 11638 CCTGGTTTACCTGTTAATAATGCACCCCTTGGTATTTTAGCACC 11681 ||||| || ||||||| ||||| | || ||| | ||||| Sbjct 1586590 CCTGGAGGTCCAACTAATAATACACCCTTAGGCATTCTTGCACC 1586547 >seq13 Length=2809497 Score = 95.1 bits (104), Expect = 2e-14 Identities = 170/247 (69%), Gaps = 6/247 (2%) Strand=Plus/Plus Query 11438 TACTTCTTTTCTTACCAATCGCATCAATTTCATCTATAAAGATAATACACGGT---TGAT 11494 |||||||||| ||| | ||||| |||||||| ||||| | |||||| ||| || | Sbjct 1123655 TACTTCTTTTAGAACCTACTGCATCTATTTCATCAATAAAAACAATACAAGGTGCATGCT 1123714 Query 11495 TTTCACGTGCCAATTCAAATATATCACGGACTCTTTTTGCGCCTACGCCTACAAACATTT 11554 ||| ||| || ||| | || | | |||| |||| ||||| || |||||||||| Sbjct 1123715 TTTT---TGCAGTTTGAAAAAGCTCTCTTATTCTTCTTGCACCTACACCAACAAACATTT 1123771 Query 11555 CAACGAACGATGACCCCGAACACTGAATAAAAGGAACGGAAGATTCACCCGCTATAGCAC 11614 | | || ||| || || || ||||| || || | ||| || || ||||| | Sbjct 1123772 CTTCAAATTCTGAACCAGATGCTTGGATAAAGGGTACATTTGCTTCCCCTGCAATAGCCC 1123831 Query 11615 GTGCTAAAAGTGTTTTACCTGTACCTGGTTTACCTGTTAATAATGCACCCCTTGGTATTT 11674 || | | |||||| ||||| || |||| ||||| ||||||| ||| | || | || Sbjct 1123832 TAGCAATTAATGTTTTTCCTGTTCCAGGTTCACCTGATAATAATATACCTTTGGGCAATT 1123891 Query 11675 TAGCACC 11681 | ||||| Sbjct 1123892 TTGCACC 1123898 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 635127552215240