Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmodium_20chabaudi_20adami_20[genbank_20GCA_5F900095565.1_202016- 11-23] 661 sequences; 19,350,400 total letters Query= NC_019704.1 Length=44375 Score E Sequences producing significant alignments: (Bits) Value seq553 168 2e-37 >seq553 Length=1089 Score = 168 bits (186), Expect = 2e-37 Identities = 140/170 (82%), Gaps = 1/170 (1%) Strand=Plus/Minus Query 44138 ATGATAATCATTATCA-TTTGCGGGTCCTTTCCGGCGATCCGCCTTGTTACGGGGCGGCG 44196 |||||||||||||||| ||| |||||||||||||| |||||| | |||||||||||||| Sbjct 931 ATGATAATCATTATCACTTTACGGGTCCTTTCCGGTGATCCGACAGGTTACGGGGCGGCG 872 Query 44197 TCCGCGCAGATTCTCGCTATTTATGAAAATTTTCTGGTTTATGCCATTTCCGTTCTTCTT 44256 || ||| | || ||||||||||||||||||||| |||||| | | |||||||||||||| Sbjct 871 ACCTCGCGGGTTTTCGCTATTTATGAAAATTTTCCGGTTTAAGGCGTTTCCGTTCTTCTT 812 Query 44257 CTTGTTTACTCATTGTTTTTGTTAAAAACGTCCTCTCTCCAGAAAGGAAA 44306 | | | ||| | ||||||| || |||| ||||| |||||||||| Sbjct 811 CGTCATAACTTAATGTTTTTATTTAAAATACCCTCTGAAAAGAAAGGAAA 762 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 141877286343234