Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmodium_20chabaudi_20adami_20[genbank_20GCA_5F900095565.1_202016- 11-23] 661 sequences; 19,350,400 total letters Query= NC_032001.1 Length=327147 Score E Sequences producing significant alignments: (Bits) Value seq6 150 4e-31 >seq6 Length=831307 Score = 150 bits (166), Expect = 4e-31 Identities = 155/203 (76%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 282897 TGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGT 282956 ||||| || ||||||||| ||||||||||||| || || | ||||| |||| |||| Sbjct 381357 TGTAAAGTCGATTCTTTTTGAATGTTGTAGTCAGATAGTGTTCTACCATCTTCTAATTGT 381298 Query 282957 TTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTT 283016 || |||||||| || || | |||||| ||| |||||||| || || |||||||| || Sbjct 381297 TTTCCGGCAAAAATTAATCTTTGTTGATCAGGAGGAATACCTTCTTTATCTTGGATTTTA 381238 Query 283017 GCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTC 283076 ||||| || | || || || || || | ||| || || |||||||| || || || || Sbjct 381237 GCTTTAACATTTTCAATGGTATCGGATGGTTCAACATCAAGAGTGATTGTTTTTCCGGTT 381178 Query 283077 AAAGTCTTAACGAATATCTGCAT 283099 ||||| || ||||| |||||||| Sbjct 381177 AAAGTTTTTACGAAAATCTGCAT 381155 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1046730335100294