Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmodium_20chabaudi_20chabaudi_20[genbank_20GCA_5F000003075.2_2020 04-12-09] 10,690 sequences; 16,893,362 total letters Query= NC_002520.1 Length=232392 Score E Sequences producing significant alignments: (Bits) Value seq4327 136 6e-27 >seq4327 Length=1153 Score = 136 bits (150), Expect = 6e-27 Identities = 155/216 (72%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 146065 TAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAAAGAGTTCTGCTATC 146124 || |||||||||||| || || ||||| || ||||| || || | ||||| | ||| Sbjct 512 TATTACCAAATGTAAGGTTGACTCTTTTTGAATGTTATAGTCAGATAATGTTCTTCCATC 571 Query 146125 ATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGAATTCCTTCTTTATC 146184 ||||||||||||||||| ||||| |||||||| ||||| || ||||||||||||||||| Sbjct 572 TTCTAATTGTTTTCCAGCGAAAATTAATCTTTGTTGATCAGGGGGAATTCCTTCTTTATC 631 Query 146185 TTGNNNNNNNNNNNNNNNNNNNNNNNNAGTATCTGAACTTTCTACTTCTAGTGTGATTGT 146244 ||| ||||| || ||| || || || |||||||| Sbjct 632 TTGGATTTTTGCTTTAACATTTTCAATTGTATCAGATGGTTCAACATCAAGAGTGATTGT 691 Query 146245 TTTACCTGTTAATGTTTTAATGAATATTTGCATTTT 146280 ||| || ||||||||||| | || ||||||||||| Sbjct 692 TTTTCCGGTTAATGTTTTTACAAAGATTTGCATTTT 727 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 743427046284800