Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmodium_20chabaudi_20chabaudi_20[genbank_20GCA_5F000003075.2_2020 04-12-09] 10,690 sequences; 16,893,362 total letters Query= NC_007151.1 Length=149622 Score E Sequences producing significant alignments: (Bits) Value seq4327 134 1e-26 >seq4327 Length=1153 Score = 134 bits (148), Expect = 1e-26 Identities = 170/230 (74%), Gaps = 3/230 (1%) Strand=Plus/Minus Query 26750 TACTTTTTA-GTCAAACAAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCA 26808 ||||||||| || | ||||||||| | ||||||||||||||||| |||||| | |||| Sbjct 744 TACTTTTTACGTTTACGAAAATGCAAATCTTTGTAAAAACATTAACCGGAAAAACAATCA 685 Query 26809 CCATCGAATTAGAATCAAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAG 26868 | | || | ||| || || || || || | || ||| ||| || || |||| Sbjct 684 CTCTTGATGTTGAACCATCTGATACAATTGAAAATGTTAAAGCAAAAATCCAAGATAAAG 625 Query 26869 AAGGGATACCTCCCGATCAACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATA 26928 |||| || || || |||||||||||| | |||| || || |||||| | ||||||| | Sbjct 624 AAGGAATTCCCCCTGATCAACAAAGATTAATTTTCGCTGGAAAACAATTAGAAGATGGAA 565 Query 26929 GAAACGTCAGC-GACTATAACATTCAAAAAGAATCTACTATCCATCTGGT 26977 ||| | | | | |||||||||||||||||||| || || | ||| |||| Sbjct 564 GAA-CATTATCTGACTATAACATTCAAAAAGAGTCAACCTTACATTTGGT 516 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478598438736800