Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmodium_20chabaudi_20chabaudi_20[genbank_20GCA_5F000003075.2_2020 04-12-09] 10,690 sequences; 16,893,362 total letters Query= NC_026268.1 Length=139132 Score E Sequences producing significant alignments: (Bits) Value seq4327 125 6e-24 >seq4327 Length=1153 Score = 125 bits (138), Expect = 6e-24 Identities = 157/213 (74%), Gaps = 2/213 (1%) Strand=Plus/Minus Query 25172 AACATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCC 25231 || |||||| | |||||||||||||||||||||||| | ||||| | || || ||| || Sbjct 727 AAAATGCAAATCTTTGTAAAAACATTAACCGGAAAAACAATCACTCTTGATGTTGAA-CC 669 Query 25232 AAC-GATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGA 25290 | | ||||| || || | || ||| |||||| |||||||| || || || || || Sbjct 668 ATCTGATACAATTGAAAATGTTAAAGCAAAAATCCAAGATAAAGAAGGAATTCCCCCTGA 609 Query 25291 TCAGCAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAATGTCAGCGATTA 25350 ||| |||||| | |||| || || |||||| | ||||||| |||| | || || Sbjct 608 TCAACAAAGATTAATTTTCGCTGGAAAACAATTAGAAGATGGAAGAACATTATCTGACTA 549 Query 25351 CAATATTCAAAAAGAATCCACCATTCATTTAGT 25383 || ||||||||||| || ||| | ||||| || Sbjct 548 TAACATTCAAAAAGAGTCAACCTTACATTTGGT 516 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445034924260800