Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmodium_20chabaudi_20chabaudi_20[genbank_20GCA_5F000003075.2_2020 04-12-09] 10,690 sequences; 16,893,362 total letters Query= NC_028112.1 Length=178262 Score E Sequences producing significant alignments: (Bits) Value seq4327 118 1e-21 >seq4327 Length=1153 Score = 118 bits (130), Expect = 1e-21 Identities = 149/205 (73%), Gaps = 0/205 (0%) Strand=Plus/Minus Query 27398 TTACTATAATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTG 27457 |||| | ||||||||||||||| || || | ||||| || || || |||||||| |||| Sbjct 732 TTACGAAAATGCAAATCTTTGTAAAAACATTAACCGGAAAAACAATCACTCTTGATGTTG 673 Query 27458 AGTCAGGTGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTC 27517 | || ||||| |||| |||| | || || ||||| || || || || |||||||| | Sbjct 672 AACCATCTGATACAATTGAAAATGTTAAAGCAAAAATCCAAGATAAAGAAGGAATTCCCC 613 Query 27518 CAGACCAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAG 27577 | || || || | ||||||| ||||| || ||| | || |||| | || || | | Sbjct 612 CTGATCAACAAAGATTAATTTTCGCTGGAAAACAATTAGAAGATGGAAGAACATTATCTG 553 Query 27578 ACTATAATGTCCAAAAGGAATCCAC 27602 ||||||| | ||||| || || || Sbjct 552 ACTATAACATTCAAAAAGAGTCAAC 528 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 570234192272800