Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Plasmodium_20chabaudi_20chabaudi_20[genbank_20GCA_5F900095605.1_2020
16-11-23] 444 sequences; 18,919,436 total letters
Query= NC_001987.1
Length=108409
Score E
Sequences producing significant alignments: (Bits) Value
seq7 149 4e-31
>seq7
Length=1041357
Score = 149 bits (164), Expect = 4e-31
Identities = 350/524 (67%), Gaps = 6/524 (1%)
Strand=Plus/Minus
Query 96997 AACTTTAGTGTTGGGAAAGGCCTGGGAGTTCGCGTAAGCTGCTCTGTGAGAGCAT-CAAT 97055
|| || || || |||||||| ||| |||| | | ||| || | | ||| | |||
Sbjct 912598 AATTTAAGAGTAGGGAAAGGATAGGGTGTTCTATTTAACTGGACTTTTA-AGCTTTCAAC 912540
Query 97056 GTGATTCACATAAATGTGAGCATCTCCTAAAGTGTGAATAAATTCTCCAGGAACTAAATC 97115
||||| ||||| ||||||| ||| || || |||||||| | || |||||
Sbjct 912539 ATGATTATTATAAACATGAGCATTTCCCAATACATGTATAAATTCAGCTGGTTGTAAATT 912480
Query 97116 AGTGACATGGGCGATCATACAAGTTAATAGAGAATAGCTAGCAATGTTAAAAGGCACCCC 97175
| || || || |||||| | || |||| ||||||| |||||| || || || || ||
Sbjct 912479 ACATACTTGTGCTATCATATATGTAAATATAGAATAGGAAGCAATATTGAATGGAACACC 912420
Query 97176 TAGTCCCATATCAGCTGATCTTTGATATAACTGACAGGAAAGCTTTCCATCACACACATA 97235
|| || | |||| ||||||||||| | ||| || | ||||||||| | |||||
Sbjct 912419 AAGACCTAAATCACAAGATCTTTGATACATAATACATGATAATTTTCCATCAAAAACATA 912360
Query 97236 AAACTGACTCAATACATGACAGGGGGGCAACGCCATTTTTGGAACATCTAAGACATTCCA 97295
||| |||| || | |||||| || || || ||||||| | |||| ||||||||
Sbjct 912359 AAATTGACATAAAATATGACAAGGAGGTAATGCCATTTGATCTAAATCTTTTACATTCCA 912300
Query 97296 AGCACACATCAACATTCTTCTATCGGTTGGGTTTGTGTGTATGGTATTAATTATCTGCTT 97355
||||| | | |||| |||| || || | | | || ||| || || | ||
Sbjct 912299 TGCACATAAAATAATTCGTCTACATGTCGGATCGTTTTTAATTAAATTTATAATATTTTT 912240
Query 97356 TAATTGATCAACGCCTTCTCCACCATAATTGTGCTTAAGACCTTGATATTCTGCTCCAAA 97415
||| |||||||| |||| | ||||| | | | || |||||| || |||||
Sbjct 912239 TAACTGATCAACACCTTTATCTTTATAATCAGCATGCATATCTGTATATTCAGCACCAAA 912180
Query 97416 ATGCCTCCATTGGAATCCATAAACAGGTCCAAGGTCTCCTTCTTCTCTATCACAGAA--A 97473
||||||||||| ||||| |||| || || | ||| ||||||||| | | ||
Sbjct 912179 GTGCCTCCATTGAAATCCGTAAATTGGACCTAAGTCATTAACTTCTCTATGAAATAATTT 912120
Query 97474 CCAAGCTTATCTAAATAGGACCTAGATCCATTTGCATCCCAAAT 97517
|| | ||||||||| | || | ||||| || ||||| ||
Sbjct 912119 CCTA--TTATCTAAAAACTCTCTTGTCCCATTAGCTTCCCATAT 912078
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 346782123465080
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |