Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Plasmodium_20chabaudi_20chabaudi_20[genbank_20GCA_5F900095605.1_2020
16-11-23] 444 sequences; 18,919,436 total letters
Query= NC_003038.1
Length=212482
Score E
Sequences producing significant alignments: (Bits) Value
seq13 87.8 2e-12
>seq13
Length=2459074
Score = 87.8 bits (96), Expect = 2e-12
Identities = 134/190 (71%), Gaps = 6/190 (3%)
Strand=Plus/Minus
Query 73930 ATGGAGATATACTAGTGCTAAATAGACAACCTACTTTACATAAAGCATCAATGATGGCTC 73989
|||| ||||| || | | ||||||||||| |||||||| ||||| ||| ||
Sbjct 1710983 ATGGTGATATTGTATTATTTAATAGACAACCATCTTTACATCGTATGTCAATTATGTGTC 1710924
Query 73990 TTCGAGTTAAAATTATGGATGTAAAAACCTTTAAATTTAATCT---TGCATGCACTAAAC 74046
| || | | |||||||| ||||| ||| |||||| || ||| | | |
Sbjct 1710923 ATAAAGCTCGAGTTATGGATTATAAAACATTTCGCTTTAATGAATGTGTATGTAGT---C 1710867
Query 74047 CATATAATGCAGATTTTGATGGAGATGAAATGAATGCTCATGCGCCTCAATCAGAAGAAA 74106
||||||||||||| |||||||| |||||||||||| |||| |||||| | ||||||
Sbjct 1710866 CATATAATGCAGACTTTGATGGGGATGAAATGAATTTACATGTACCTCAAACCGAAGAAT 1710807
Query 74107 GTAAAGCTGA 74116
|| ||| ||
Sbjct 1710806 CTAGAGCAGA 1710797
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 679810627030080
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |