Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Plasmodium_20chabaudi_20chabaudi_20[genbank_20GCA_5F900095605.1_2020
16-11-23] 444 sequences; 18,919,436 total letters
Query= NC_008724.1
Length=288047
Score E
Sequences producing significant alignments: (Bits) Value
seq11 141 2e-28
seq6 140 6e-28
>seq11
Length=1651515
Score = 141 bits (156), Expect = 2e-28
Identities = 158/211 (75%), Gaps = 0/211 (0%)
Strand=Plus/Plus
Query 68252 TACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTC 68311
|||||| |||| || ||||||||||| |||||||| || || | ||| || ||||||||
Sbjct 1490878 TACCAAATGTAAGGTTGACTCTTTTTGAATGTTATAGTCAGATAATGTTCTTCCATCTTC 1490937
Query 68312 TAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTG 68371
||| || || || ||||| || | ||||||||| || || ||||| ||||| || |||||
Sbjct 1490938 TAATTGTTTTCCAGCGAAAATTAATCTTTGTTGATCAGGGGGAATTCCTTCTTTATCTTG 1490997
Query 68372 AATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTT 68431
|| ||||| || || || || || || | || ||| || || | ||||| |||||
Sbjct 1490998 GATTTTTGCTTTAACATTTTCAATTGTATCAGATGGTTCAACATCAAGAGTGATTGTTTT 1491057
Query 68432 TCCCGTGAGGGTCTTGACGAATATCTGCATT 68462
||| || | || || || || || ||||||
Sbjct 1491058 TCCGGTTAATGTTTTTACAAAGATTTGCATT 1491088
>seq6
Length=837512
Score = 140 bits (154), Expect = 6e-28
Identities = 158/212 (75%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 68250 AATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCT 68309
|| || ||||||| || || |||||||| ||||| || || || ||||| || ||||||
Sbjct 386705 AAAACTAAGTGTAAAGTCGATTCTTTTTGAATGTTGTAGTCAGATAGTGTTCTACCATCT 386646
Query 68310 TCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCT 68369
||||| || || ||||| || || | ||||||||| || || ||||| ||||| || |||
Sbjct 386645 TCTAATTGTTTTCCGGCAAAAATTAATCTTTGTTGATCAGGAGGAATACCTTCTTTATCT 386586
Query 68370 TGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTT 68429
||||| || || || || || ||||| || | || || || || | ||||| |||
Sbjct 386585 TGAATTTTAGCTTTAACATTTTCAATGGTATCAGATGGCTCAACATCAAGAGTGATTGTT 386526
Query 68430 TTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
|| || || | || || ||||| ||||||||
Sbjct 386525 TTCCCGGTTAAAGTTTTTACGAAAATCTGCAT 386494
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 921617284995680
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |