Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmodium_20chabaudi_20chabaudi_20[genbank_20GCA_5F900095605.1_2020 16-11-23] 444 sequences; 18,919,436 total letters Query= NC_014765.1 Length=198519 Score E Sequences producing significant alignments: (Bits) Value seq7 416 4e-111 seq8 235 7e-57 seq10 188 9e-43 seq6 158 2e-33 seq9 102 1e-16 seq13 98.7 1e-15 >seq7 Length=1041357 Score = 416 bits (460), Expect = 4e-111 Identities = 1100/1655 (66%), Gaps = 46/1655 (3%) Strand=Plus/Plus Query 6517 ATAACAGTAGTTTTCGAGACCATTCTTCGCCTCGAC-CTTTTTCGCGTACTTT--TCATC 6573 ||| || |||||||| |||| || | || || | |||||| || ||| ||||| Sbjct 684444 ATAGCAATAGTTTTCAAGACTGTTTCTTGCTTCAATTCTTTTTT---TATTTTCTTCATC 684500 Query 6574 TTCATCTTTATACTTTTCCGCATCTTGGACCATCTTTTCAATGTCTTCTTTCGATAATCT 6633 ||| ||||||| ||||| ||||| | ||||| | ||||| ||||| |||||||| Sbjct 684501 TTCTGCTTTATATTTTTCAGCATCATTAACCATTCTATCAATTTCTTCAGGAGATAATCT 684560 Query 6634 CCCCTTATCATTCGTAATCGTAATCT--TTTCGGATTTACCCGAGGCCTTATCTTCAGCA 6691 || || ||||| ||||| || || | ||| | |||||| | || || |||| Sbjct 684561 ACCTTTGTCATTAGTAATTGTGATATGATTTTG--TTTACCTGTACTTTTTTCAACAGCT 684618 Query 6692 CTTACATTCAAAATACCATTTGCATCAACATCGAACCTTACATTAATTTGTGGTGTACCC 6751 | ||||| || |||||||||||||||| ||| || | || | |||||||| ||| Sbjct 684619 GTGACATTTAAGATACCATTTGCATCAATATCAAAGGTAACTTCGATTTGTGGA--ACCT 684676 Query 6752 CTC--GGTGCGGCTGGAATACCCGTTAAATCAAATGTACCAAGTAAACTGTTATCCGTCG 6809 || || || | ||||||||| ||||| |||| |||| | ||| | ||||| | | Sbjct 684677 TTCTAGGAGCAGGTGGAATACCATCTAAATGAAATTTACCTAATAAGTTATTATCTTTGG 684736 Query 6810 CCTT----CTTACGTTCACCTTCATAGACTTTAATTGTCACCGCAGGTTGATTATCTTGT 6865 || || | ||| |||||||| |||| ||| ||| | ||||||||||| Sbjct 684737 --TTAAGGCT--CTTTCTCCTTCATATACTTGTATTAACACACCTGGTTGATTATCAGCA 684792 Query 6866 GCCGTTGAGAAGATTTGTTCTTTCTTAGATGGAATCGTCGTATTTCTCGGAATAACCGGG 6925 || | || ||||| ||| || | |||||| || |||||||| ||| | Sbjct 684793 TAGGTGGTAAAAATTTGACTTTTTTTTGCTGGAATTGTTGTATTTCTTTCAATTAATTTT 684852 Query 6926 GTCATAATACCACCCATAGTTTCGAGTCCAAGAGACAGAGGTGTCACGTCCAAGAGTAAC 6985 ||||||| ||| || |||||| | ||| | ||| | | || || || | ||| Sbjct 684853 GTCATAACACCTCCTGCAGTTTCTAATCCTAAAGATAAGGAACAGACATCTAATAATAAT 684912 Query 6986 AGGTCTTGAACAG-ATTCGTTCCCTTCACCCGTTAAGATGGCGGCTTGGACCGTCGCCCC 7044 | ||||| || | ||| | | | |||| | ||| |||||||||||||| | || || Sbjct 684913 AAATCTTGTACTGCATTGGATTGAT-CACCTGATAAAATGGCGGCTTGGACAGCAGCACC 684971 Query 7045 GTATGCGACCGCCTCATCGGGGTTAATCGTTTT--ATTCAGTTCTTTACCGTTAAAATAA 7102 || || || || ||||| || || || | | | || | ||||||||| ||||| | Sbjct 684972 ATAAGCAACAGCTTCATCAGGATTGATTGATCTGCATGC--TTCTTTACCATTAAAGAAT 685029 Query 7103 TCCGATAACATTTGTTGAATTTTCGGGATTCGTGTCGATCCACCGACCAAAACGATTTCA 7162 || || | | ||||||||| || |||| ||| |||||||| || || || | |||| Sbjct 685030 TCTTTTATTAATGTTTGAATTTTTGGAATTCTTGTAGATCCACCAACTAAGACAACTTCA 685089 Query 7163 TTCACTTTCGATTTATCGATCTTTGAGTCTCGAAGTGTTTTTTCGACAGGT-TCCATACA 7221 | || || ||| || ||| | | ||| | |||||| |||||| | || | Sbjct 685090 TGAACACTCTTTTTGTCCATCATGGCATCTTTTAAAACTTTTTCAACAGGTATTAATGTA 685149 Query 7222 TTTACGGAACAAGTCCATACACAGTTCCTCAAAACGTGCACGGGTAATGGATGTATAGAA 7281 | | | || |||| ||||| | ||| ||||| | || | ||| | | | | Sbjct 685150 TCT-CTAAAATAGTCAATACATAATTCTTCAAATCTAGCTCTACTAACTGTTACACTATA 685208 Query 7282 ATCAACGCCGTCGTATAACGAATCAATTTCAATGGTTGTTTGTGCCGTCGAAGATAACGT 7341 ||||| || || | | |||||||||||||| |||| ||| | | |||||||| || Sbjct 685209 ATCAATACCTTCAAAAAGAGAATCAATTTCAATTGTTGCTTGAGTTGAAGAAGATAAGGT 685268 Query 7342 TCGCTTTGCGCGCTCACACGCCGTTCGTAAACGACGAAGGGCACGCGGGTTACCGGAAAT 7401 || ||||| | ||||| |||| ||| | | | || | || || | Sbjct 685269 ACGTTTTGCTCTTTCACATTGTGTTCTTAATCTTCTTAAAGCTCTACTATTTTTTGATAA 685328 Query 7402 ATCTTT--CT-TATGTTTACGTTTAAACTCTTCAGAG---AAGTGT-CGAAGGAGTCTCG 7454 |||||| || ||| ||| | |||||| |||||| | |||| | | || || Sbjct 685329 ATCTTTGCCTCTATTTTTTCTTTTAAAATCTTCAACGCAAAAGTTTACTAAACGGTT--- 685385 Query 7455 AATCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATAC 7514 ||| |||||||||||||| || || ||||| || || || ||||| ||||| || |||| Sbjct 685386 -ATCAAAATCTTCACCACCTAAATGGGTATCTCCTGCTGTTGCTTTAACTTCGAATATAC 685444 Query 7515 CTCCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTA 7574 | ||||||| | | || ||||||||||| |||||||| || | || ||||| | | Sbjct 685445 CATCTTCAATAGTAAGTAATGAAACATCAAAAGTACCACCTCCTAAATCGAAAATTAAAA 685504 Query 7575 CGTTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTT 7634 || | || | | | || || | | ||| || || ||||| || || ||||||| Sbjct 685505 TATTTTTTTCTCCTTTTCCTTTTTTGTGTAAACCATATGCAATAGCTGCTGCAGTTGGTT 685564 Query 7635 CATTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTC 7694 |||| ||||| | | | || | || ||||| || | |||||||| || ||||| | Sbjct 685565 CATTTATAATTCTCATAACATTTAATCCTGCAATTGTACCAGCATCTTTTGTTGCTTGCC 685624 Query 7695 GTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGA 7754 ||| || |||||||| || || || || || | ||| || | | | || || | Sbjct 685625 TTTGAGAGTCGTTAAAATATGCAGGTACTGTGATGACTGCATTTTTTATAGATTTTCCTA 685684 Query 7755 GATACGATTCCGCGATATCTTTCA-TTTTGGTAAGAACCATCGATGAAATCTCTTCAGCC 7813 | | | ||| || | ||||||| |||| |||| |||||| || ||||| ||||||| Sbjct 685685 AAAAGGCTTCTGCATTTTCTTTCATTTTTTGTAA-AACCATAGAAGAAATTTCTTCAGGG 685743 Query 7814 GCAAACTGTTTCGTTTCACCGTTAAAATCAACTTCAATCATGGGTTTATCCGCAGCACCG 7873 ||| ||| | ||||| | | || ||||||||||||| ||||| || || ||| Sbjct 685744 TGAAATAATTTTTTCTCACCTTGATAAACAACTTCAATCATAGGTTTTTCTTCAATACCT 685803 Query 7874 GGGATAACCTTATACGACCAATCTTTCATATCGTCTTGGACCTGTTGGTCCGAAAACTTT 7933 | | || || | | ||| | ||||||||| ||| || || | ||| || Sbjct 685804 GATTTGACTGTAAATGGCCAGTGTTTCATATCACTTTGTACAGAAGATTCTGTAAATTTC 685863 Query 7934 CTTCCGATAAGACGCTTTGCATCAAAAACTGTGTTTTTGGGGTTCATGGCTGTTTGGTTC 7993 ||||| || | | |||||||| || ||||| |||| || || | || ||| || Sbjct 685864 CTTCCTATTAATCTTTTTGCATCGAAGACTGTATTTTCTGGATTTCTTGCAACTTGATTT 685923 Query 7994 TTCGCCGCGTCCCCGATAAGACGTTCATTATTTTCCGTAAACGCGACGTACGATGGGGTC 8053 || || || || || || | | ||| || || || || || || || |||||||| Sbjct 685924 TTAGCTGCATCACCAATTAATCTTTCTGTA---TCAGTGAAAGCAACATAGGATGGGGTT 685980 Query 8054 GTTCGATTCCCTTGGTCGTTCGCAATAATTTCTACGCGGTCGTTTTGCCAGACGCCGACG 8113 |||| || ||||| ||||| ||||| || || || || ||| ||| || || || Sbjct 685981 GTTCTGTTACCTTGATCGTTAGCAATTATATCAACATTTTCATTTCTCCATACACCAACA 686040 Query 8114 CACGAATACGTTGTTCCTAAATCAATACCGATTGC 8148 || || || || || |||||||| ||||| || || Sbjct 686041 CAGGAGTAAGTGGTACCTAAATCGATACCTATAGC 686075 >seq8 Length=1320916 Score = 235 bits (260), Expect = 7e-57 Identities = 833/1281 (65%), Gaps = 44/1281 (3%) Strand=Plus/Minus Query 6553 CTTTTTCGCGTAC-TTTTCATCTTCATCTTTATACTTTTCCGCATCTTGGACCATCTTTT 6611 ||||||| | || |||| ||||||||| | | ||||| ||||| | | ||| |||| Sbjct 733302 CTTTTTCTCTTAAATTTTTATCTTCATCAGCAAATTTTTCAGCATCGTTAATCATTTTTT 733243 Query 6612 CAATGTCTTCTTTCGATAATCTCCCCTTATCATTCGTAATCGTAAT--CTTTTCGGATTT 6669 | || | |||||| |||||||| || || ||||| ||||| || || |||| | ||| Sbjct 733242 CTATTTGTTCTTTTGATAATCTACCTTTGTCATTAGTAATAGTTATACCTTTACT--TTT 733185 Query 6670 ACCCGAGGCCTTATCTTCAGCACTTACATTCAAAATACCATTTGCATCAACATCGAACCT 6729 || | | |||||||| || |||| |||||||| ||| || ||| || | Sbjct 733184 TCCTGTTCCTTTATCTTCTGCTTCAACATGTAAAATACCGTTTTTGTCGACAGTAAATGT 733125 Query 6730 TACATTAATTTGTGGTGTACCCCTCGGTGCGGCTGGAATACCCGTTAAATCAAATGTACC 6789 || | |||| ||| ||| || |||| | ||||||||| | ||| |||||| | || Sbjct 733124 AACCTCGATTTTAGGTACACCTCTTTGTGCAGGTGGAATACCAGATAATTCAAATTTTCC 733065 Query 6790 AAGTAAACTGTTATCCGTCGCC--TTCTTACGTTCACCTTCATAGACTTTAATTGTCACC 6847 | |||| |||||| | | | || | ||| |||||| |||||| |||| || Sbjct 733064 TAATAAATGGTTATCTTTAGTTAATGCT--CTTTCTCCTTCAAAGACTTGAATTAAAACA 733007 Query 6848 GCAGGTTGATTATCTTGTGCCGTTGAGAAGATTTGTTCTTTCTTAGATGGAATCGTCGTA 6907 || ||||| |||||||| ||||| ||| ||||| ||| || | ||| || ||| Sbjct 733006 GCTGGTTGGTTATCTTGATAGGTTGAAAAGGTTTGTGATTTTTTTGTTGGGATAACTGTA 732947 Query 6908 TTTCTCGGAATAACCGGGGTCATAATACCACCCATAGTTTCGAGTCCAAGAGACAGAGGT 6967 ||||| ||| | | |||||||||||||| | |||||| | || | || | || Sbjct 732946 TTTCTTTTAATTAATTGAGTCATAATACCACCAACAGTTTCAATACCTAAAGTTAATGGA 732887 Query 6968 GTCACGTCCAAGAGTAACAGGTCTTGAACAGATTCGTTCCCTTCACCCGTTAAGATGGCG 7027 || || || || | || | ||||| | ||| |||| || | || | Sbjct 732886 GTAACATCTAACAATACAACATCTTGTA---ATT------CTTCTCCTAAAATAATACCA 732836 Query 7028 GCTTGGACCGTCGCCCCGTATGCGACCGCCTCATCGGGGTTAATCGTTTTATTCAGTTCT 7087 ||||| | | || || ||||| || || ||||| |||||||| | |||| ||||| Sbjct 732835 GCTTGAATAGCAGCACCATATGCTACGGCTTCATCTGGGTTAATACCTCTATTTGGTTCT 732776 Query 7088 TTACCGTTAAAATAATCCGATAACATTTGTTGAATTTTCGGGATTCGTGTCGATCCACCG 7147 |||||||| ||| | || | |||||||||||||| || || || || || || || Sbjct 732775 TTACCGTTGAAAAACTCTTTAATAATTTGTTGAATTTTAGGTATACGAGTTGAACCTCCT 732716 Query 7148 ACCAAAACGATTTCATTCACTTTCGATTTATCGATCTTTGAGTC-TCGAAGTGTTTTTTC 7206 || ||||| ||||||| | ||| ||| || |||| || || || | ||||| Sbjct 732715 ACTAAAACAATTTCATCGATTTTGCTTTTTTCATATTTTGCATCATCTAA-TACTTTTTT 732657 Query 7207 GACAGGTTCCATACATTTACGGAACAAGTCCATACACAGTTCCTCAAAACGTGCAC-GGG 7265 |||||||| | | || | || || || | | ||| ||||| || | | Sbjct 732656 AACAGGTTCTAAAGTTTCTCTAAATAAATCATCATTTAATTCTTCAAATTTGGCTCTTGT 732597 Query 7266 TAATGGATGTATAGAAATCAACGCCGTC--GTATAACGAATCAATTTCAATGGTTGT-TT 7322 ||||| | | | || | | || || |||| | ||||||||||| |||| || Sbjct 732596 TAATGTTTCT-GAAAAGTTATGTCCTTCAACTATATC--TTCAATTTCAAT--TTGTGTT 732542 Query 7323 GTGCCGTCGA-AGATAACGTTCGCTTTGCGCGCTCACACGCCGTTCGTAAACGACGAAGG 7381 | | | | ||||| ||| ||||| ||| | ||| ||| ||| Sbjct 732541 GAGTGAACAACTGATAAGTTTCTTTTTGCAATTTCAACTTCTTTTCTTAATTTTTGAATA 732482 Query 7382 GCACGCGGGTTACCGGA---AATATCTTTCTTATGTTTACGTTTAAAC-TCTTCAGAGAA 7437 || | ||| | || || |||| | |||| ||| ||||||| | || | | || Sbjct 732481 GCTC---TTTTATCTGATCTAAGATCTATATTATTTTTTTTTTTAAACATTTTTATAAAA 732425 Query 7438 GTGTCGAAGGAGTCTCGAATCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGC 7497 ||| | | ||| ||| ||||||||||| || ||||| |||| || || || || Sbjct 732424 TAGTC-CATAACTCTTTGATCAAAATCTTCACCTCCTAAGTGAGTATTACCTGCTGTTGC 732366 Query 7498 TTTGACTTCAAAGATACCTCCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACC 7557 | ||||||||| | ||| ||||| ||| | ||||||||||| |||||||| || Sbjct 732365 ATAGACTTCAAATACACCATTATCAATAACTAAAATAGAAACATCAAAAGTACCACCTCC 732306 Query 7558 CAGGTCAAAAATGAGTACGTTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGAT 7617 | || | | | | | || |||| || ||||| | ||| || || | Sbjct 732305 TAAATCGTATACTAAAATACTTGT------TTCTTCTTTTTTATCTAAACCATAAGCTAA 732252 Query 7618 AGCCGCCGCCGTTGGTTCATTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGC 7677 ||| || || || ||||||||||||||||| | || | |||||||| | | || Sbjct 732251 AGCAGCAGCGGTGGGTTCATTAATAATACGTACTATATTTAATCCAGCAATTGCACCAGC 732192 Query 7678 ATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTC 7737 |||||| || ||||||| ||| | ||| || || || || || || || || || || | Sbjct 732191 ATCTTTTGTAGCTTGTCTTTGTGCATCATTGAAATATGCAGGTACAGTAACAACAGCATT 732132 Query 7738 CGTGACTTTCTTACCGAGATACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGA 7797 | || ||||| | | | |||| || || ||||||||||| | |||||| | Sbjct 732131 TTTTACGGGTTTACCCAAAAAGGATTGAGCAATTTCTTTCATTTTTTCTAAAACCATAGC 732072 Query 7798 TGAAATCTCTTCAGCCGCAAA 7818 ||| | ||||| ||||| Sbjct 732071 ACTAATTTGTTCAGGTGCAAA 732051 >seq10 Length=1559237 Score = 188 bits (208), Expect = 9e-43 Identities = 562/849 (66%), Gaps = 26/849 (3%) Strand=Plus/Minus Query 115062 ATAATCACCGACGCGCTTTTCAAAAAAGTTTGTTTTGCCGTCGAGTGATATATTCTCCAT 115121 |||||| | || | ||||||||| || |||||||| || | | ||||| ||||| Sbjct 1415792 ATAATCTGCAACTCTCTTTTCAAAGAAATTTGTTTTTCCTTGTAAAGATATTAAGTCCAT 1415733 Query 115122 AAAATCAAAGGGATTTTTCGTGTTCCAGATTTTATTGTGACCCACTTGTTTTGATAATCG 115181 || ||| |||||||| | | | | ||| | ||| | || | ||||||| Sbjct 1415732 CCAACTAAATGGATTTTTTGAATGGAAAACTTTGGAGCAACCTAAACATTCTAATAATCG 1415673 Query 115182 ATCCGCAACATATTCGATATACTCCGACATTTTACCGGAATTCATACCTATGAGACTACA 115241 ||| |||||| |||| || || | ||||| | |||||||| || || | | ||| Sbjct 1415672 ATCAGCAACAAATTCAATGTATTGAGACATAAGTCTTGAATTCATTCCAATTAAATCACA 1415613 Query 115242 CGGAAGTGCGTCCGTAATGAATTCTTTTTCGATTGAAACGGCGTCTCT---TATAATTTC 115298 || | | || ||| ||| | |||| | | ||| || ||| | |||| ||| Sbjct 1415612 AGGTAAAGATTCACAAATAAATGATCTTTCTACTTCAACTGCTTCTTTAACTATATTTTG 1415553 Query 115299 TTCAATTGTATTTTGAGATGGTTTGTTTTTTAACATGTTGAATAATTCAACCGC-AAATT 115357 ||| | || || | ||| |||| ||||| | | | |||| ||| ||| | Sbjct 1415552 AACAACC-TCTTCTGGCAA--TTTATTTTCTAACAAGCTATA-AATTAAACAATTAAAAT 1415497 Query 115358 CTTGGTGCATACCTTCATCTCGACTTATGAGTTCATTACTAAAACATAAACC-TGGAAGT 115416 || ||| | |||||||||| ||| || | |||||||||||| |||||| || || | Sbjct 1415496 CTGTGTGTAATCCTTCATCTCTACTAATCAATTCATTACTAAATGTTAAACCATGTAATT 1415437 Query 115417 AACCCTCTCTTTTTTAACCAAAAAATAGCACAAAAACTACCCGAGAAGAATATACCTTCA 115476 | | | ||||| |||||||| || ||||||||||| || || ||||| ||||| Sbjct 1415436 TATTTTGT-TTTTTAAACCAAAATATTGCACAAAAACTTCCACTAAATAATATTCCTTCG 1415378 Query 115477 ACACACGCAAAGGCTAATAAACGTTCAGCAAATGG--TCGTTTCTTATCAAACCACTTCA 115534 ||||| ||| |||| | | ||||||||| | |||| || | | | ||| || Sbjct 1415377 ACACATGCATTAGCTACAATTCTTTCAGCAAAAGAGTTCGTATCGTTT--ATCCATTTAG 1415320 Query 115535 TAGCCCATTTCGCCTTTCTTTCGATACACGGAATTGTTTGAATTGCTTCGAATAATTGTT 115594 |||||| || || ||| || || || ||| ||| || | ||||| | | Sbjct 1415319 CTGCCCATAATGCTTTATTTTTTATTGCTGGTATATTTTCAATAGCATGAAATAAATTTA 1415260 Query 115595 ---TCT-TTTCGCTAGAATTTTTTATATACTTGTCTATGAGTTTACTGTACGTTTCACCG 115650 ||| |||| | || | ||||| || || || | | ||| || |||||| | Sbjct 1415259 ATCTCTCTTTCTC----ATCCCTAATATAATTATCAATTAATAAACTATAGGTTTCAGAG 1415204 Query 115651 TGTACCATTTCATTGTGAGATTGATAGGCATAAAATGATCGAGCCTCCGTAAGTTGTATT 115710 |||| ||||| |||| | |||||||| | || || | | ||||| | Sbjct 1415203 TGTATATTTTCAACAGCTATTTGAAAAGCATAAAACTTTTTGGCTTCAATTATTTGTACT 1415144 Query 115711 TCATCTGCAAAATT-ATTATTTATATTTTCAAAAACTATACCATCAGAACCAGCaaaaaa 115769 || ||| |||||| | || || |||||| || ||||| |||||| | | |||||||| Sbjct 1415143 TC-TCTTAAAAATTTACTAGCTAAATTTTCTAATACTATTCCATCACTAGCTGCAAAAAA 1415085 Query 115770 aGCTAAAATATATTTTATAAAATGTTTTTCATTATCACTTAATTCATTCCAA-TCATCCA 115828 |||| | || ||||||||||||||||||||| || |||||| ||| || || | || Sbjct 1415084 TGCTAGCACATGTTTTATAAAATGTTTTTCATTTACATTTAATT-TTTCAAAGTCTTTCA 1415026 Query 115829 TATCTTTGGAAAAGTCTATCTCTTCAGCGGTCCAATTTGACATTTGGGCCTTTTTATACA 115888 ||| | || || ||||| |||||||| |||||| ||| | || |||||||| | Sbjct 1415025 AATCACTTGATAAATCTATTTCTTCAGCAGTCCAAAATGAGGCCTCAGCTTTTTTATAAA 1414966 Query 115889 AAGTCCATA 115897 || |||||| Sbjct 1414965 AATTCCATA 1414957 >seq6 Length=837512 Score = 158 bits (174), Expect = 2e-33 Identities = 969/1541 (63%), Gaps = 43/1541 (3%) Strand=Plus/Minus Query 104470 TGGTCTATATACACACCTCTATCCGCCGCCATATCGATGATTGTTTTTTGACTCATTTCC 104529 ||||| || | | ||| | ||| || ||||| || || || ||||||| | |||||| Sbjct 430871 TGGTCAATGAAAATACCACGATCAGCAGCCATGTCAATAATATTTTTTTGTTTGATTTCC 430812 Query 104530 CATACGGTTTTATACAATTCCTTAAGATCATCGGGTATATCAATAATGTTTTGAACAGAC 104589 || |||||||||||||| || || | ||| ||||| || |||| | ||||||| Sbjct 430811 CAAACGGTTTTATACAACTCTTTCAAGTCACTAGGTATTTCGCTAATATATTGAACACTT 430752 Query 104590 CCATTTGCCTTCACCATAA---GATCTTTCATTTCCTTCGACCAGAGTCCACGTTCTTTC 104646 ||||| | | || | | | |||||| || | ||| || || ||| || Sbjct 430751 CCATTA---TGGGCAATTAATTGTTGTTTCATATCTTCATCCCAAAGACC----TCTATC 430699 Query 104647 AAA----TCGTTTACTAAATGTTTGTTTACGACGACAAATTCACCCGCGAGTGTTCGTCT 104702 ||| || |||| ||||| || || || | ||||||||| | ||||| Sbjct 430698 AAAAAGATCTTTTAACAAATGAGGATTAACAACAAAAAATTCACCACTTAAAACACGTCT 430639 Query 104703 CAAATAGATATTGGTCGTATACGGTTCGAAACACTCGTTGTTCCCTAAAATCTGGGATGT 104762 |||| || || | ||||| ||||| || | || || || |||||||| || || || Sbjct 430638 GTAATAAATGTTACTTGTATATGGTTCAAAGGATTCATTATTTCCTAAAATTTGCGACGT 430579 Query 104763 GGATGCGGTAGGCATAGGTGCAAGAAGAAGACTATTCATAGTTCC----TTTCTTAACAA 104818 || || || ||||||||||| | ||||||| ||| | ||| || |||| Sbjct 430578 TGAAGCTGTTGGCATAGGTGCTAAAAGAAGAGAATTTCTTAATCCATGTTTACTTATTTT 430519 Query 104819 GTTTACGCATGGCATTCCAATCG---TATCGACCACTAAACTTTGGGTCTCGATCCCACA 104875 ||| || || |||||| ||| | | | ||||| | || ||||| Sbjct 430518 TTTTTTTAATAA-ATCCCAATCCCAATATTTATTA-TCGACTTTTGC-----ATTCCACA 430466 Query 104876 TATCGAATTGAAGAATACCTTTACTAAACGGTGACCCCTTAAACGTTTCATAAGGACCGT 104935 |||| ||||| | || |||| || || || | | | | |||||| || || Sbjct 430465 TATCAAATTGTAATATTCCTTGGCTTGCTGGACTACCTTGATATGATTCATATGGTCCAC 430406 Query 104936 ACATTTCGGCAAGTTCACACGACGATTCGAGTGATGCGTGGTAGATAGTTTCGAATATAT 104995 | || || | |||| ||| ||| | | || | || |||||||| ||||| Sbjct 430405 TTACTTGTGCCAATTCAACAGACATTTCTAAAGCAGCATAATACATAGTTTCAAATATTC 430346 Query 104996 CAATGTTGAGTTTTCTCGATTCTTCTGAACCGAATGTCATTCTTAACATGATAAACACGT 105055 | || | || | | | |||||| || | ||| |||||| | ||||| | Sbjct 430345 TTCTATTTAATTCTTTAGCTTCTTCAGATTCATATGGATATCTTAAAAGCATAAATGTAT 430286 Query 105056 CAGCGAGACCCTGAACACCAATACCGATGGGTCTGTGACGCATATTTGAACGTTTCCCGT 105115 | || | || || || || || || || ||||| || | ||||||| | || | | | Sbjct 430285 CTGCTAATCCTTGTACTCCTATTCCAATAGGTCTATGTCTTTTATTTGATCTTTCCGCTT 430226 Query 105116 TTTCGGTTGGGTAAAAGTTTTTATCAATAACCTTGTTTAAGTTACGTGTAACCATTTTCG 105175 || ||| ||| | ||| | ||||||| || | ||| || | |||| ||||| | Sbjct 430225 CTTTAACTGGATAATAATTTCTTTCAATAATTTTATCTAAATTTCTAGTAATAATTTTAG 430166 Query 105176 TAACACGATGTAACTCTTCATGGTTAAACTCGTTCTTCTCGACATCAACGTATTTTGGTA 105235 ||| | || ||| | || | ||||| || || || || |||||| |||| || Sbjct 430165 TAATATCATATAATTTTTTAAAATTAAATTCTTTTTTTTCTCTATCAACAAATTTGCATA 430106 Query 105236 ACGCGATTGATGCGAGATTACATACGGCGGTTTCTTCC--TTATCCGTAAACTCCAGAAT 105293 | || || || || | |||||| || || ||| || | || ||| | || | ||| Sbjct 430105 ATGCAATGGAAGCTAAATTACAAACAGCTACTTCATCAGGTGAT--GTATATTCAATAAT 430048 Query 105294 TTCTGTACACAAATTTGATGATTTAATCGTACCAACGTGTTTATGGTTCGACTTTTCATT 105353 ||| ||| ||||| ||||||| || || | | ||| || ||||| || ||| Sbjct 430047 TTCACAACATAAATTACTGCATTTAATTGTTCCTAAATTTTTTTGATTCGATTTAGAATT 429988 Query 105354 ACACGCGTCTTTGTAAAGCATATATGGGGTTCCCGTTTCACTTTGGGATT-TAATAATTG 105412 ||| || ||||| || | ||||||||| || ||||| ||||| || ||||| | | Sbjct 429987 ACATGCATCTTTATATAACATATATGGTACACCAGTTTCTATTTGGCTTTGTAATA-TAG 429929 Query 105413 CTTTCCAAATCTCCGAAGCTGGTACAACTTTAGTTGCGATACCTTCAGATTCGTATTTCT 105472 | ||| | || || | | ||| || | | | ||| ||||||||| Sbjct 429928 CAAACCATAAATCTTGTGCAAGAATTGTTTTTTTTCCAAGATTTTCTTCTTCGTATTTTG 429869 Query 105473 CGTAAAGATCTTCAAACTCTTTACCGTACACGTCTGAAAGACCCTTTGCC--TGATCAGG 105530 || | | |||||| |||| ||| || || | | | | | | | | || ||| Sbjct 429868 TATATAATTTTTCAAATTCTTCACCC--CAGGTTTCACTTAAGCCTGGACATTCATTAGG 429811 Query 105531 ACAAAACAATGACCAATTACCATCGGATTCAACGCGTTTCATGAACAAATCTGGAATCCA 105590 || | || | ||| || || | || | |||||| || ||||| || | ||| Sbjct 429810 GCACATTAAAGTCCAGTTCTTATTTTCCTTTACTCTTTTCATAAATAAATCAGGTACCCA 429751 Query 105591 CATGGCTGAAAAGAGGTCTCGACACCTCGCCTCTTCATCACCTTGATTCAAACGAATTTC 105650 || || |||| | || ||| ||| ||||| | ||| ||||| | | || Sbjct 429750 AATAGCATAAAATAAATCACGAGCTCTCAATTCTTCTTTACCATGATTTTTTCTTAAATC 429691 Query 105651 GAGAAAATCGAGAATATCGGCGTGCCATGGTTCTAAATAGACTGCAATAGACCCTTTAC- 105709 | ||| || | |||||| | ||||||||||| | ||| || |||| ||| ||||| | Sbjct 429690 TAAAAATTCAAAAATATCTGAATGCCATGGTTCAACATATACAGCAAAAGAACCTTTTCT 429631 Query 105710 --GACGCCCCGCTTGATTGACATATCTTGCGGTTGAGTTATACACTCGTAACATTGGAAT 105767 | || |||||| ||||||||||| || ||| | |||| |||||| || | Sbjct 429630 TTTTCCTCCACCTTGATCTACATATCTTGCTGTATCATTAAAAACTCTTAACATCGGGAC 429571 Query 105768 AATACCATCGGATGTTCCATTTGTTCCACGAATATGTGATTTATTTGCACGTACATCGTG 105827 | ||||| ||| | ||||| ||||| | || | || || | || | | ||| || Sbjct 429570 TAAACCATTTGATATACCATTAGTTCCTCTGATGTAAGAATTTTGAGCTCTAATATCTTG 429511 Query 105828 AACGTGTAACCCAATACCCCCAGCCCACTTACTGATACGCGCACACTCTTTTACTGTATC 105887 || | || ||||| || || ||||| || ||||| | |||| ||| || Sbjct 429510 TACAGCCACACCTATACCTCCTGCTGTTTTACTAATCAATGCACATTGCTTTAATGTTTC 429451 Query 105888 GTAAATACCGTCGATACTATCTTCCTT-ATTCGCAATCAGGAAACACGATGACATTTGTG 105946 | ||||| || || ||| || ||| ||| | || || || |||||||| | Sbjct 429450 AAATATACCTTCTATTGAATCAGATTTCATTGATAAT-AAAAAGCATGAAGACATTTGGG 429392 Query 105947 GTCTGGGTGTACCAGCATTGAACAGAGTTGGTGTTGCATGA 105987 |||| ||||| || | ||| || | || || || |||||| Sbjct 429391 GTCTTGGTGTTCCCGAATTAAATAATGTAGGAGTAGCATGA 429351 >seq9 Length=1306843 Score = 102 bits (112), Expect = 1e-16 Identities = 170/243 (70%), Gaps = 11/243 (5%) Strand=Plus/Plus Query 11444 TTTTCTTACCAATCGCATCAATTTCATCTATAAAGATAATACACGGTTGATTTTCACGTG 11503 ||||| | |||| |||||||||||||||||||| |||||| | ||| || || | || Sbjct 549720 TTTTCGT-CCAACAGCATCAATTTCATCTATAAAAATAATAGATGGTGCATGTTTTCTTG 549778 Query 11504 CCAATTCAAATATATCACGGACTCTTTTTGCGCCTACGCCTACAAACATTTCAACGAACG 11563 | | |||||| || | |||||| || || | || ||||| | ||||| || Sbjct 549779 CTTGTGCAAATAATTCTCTAACTCTTGATGGTCCGATTCCAACAAATACTTCAATAAA-- 549836 Query 11564 ATGACCCCGAACACTGA-----ATAAAAGGAACGGAAGATTCACCCGCTATAGCACGTGC 11618 || || | |||||| | ||||||||| || |||||| || | ||| ||| Sbjct 549837 ATCACTTC---CACTGATATTAAAAAAAGGAACATTAGCTTCACCAGCAACAGCTTTTGC 549893 Query 11619 TAAAAGTGTTTTACCTGTACCTGGTTTACCTGTTAATAATGCACCCCTTGGTATTTTAGC 11678 ||| | ||||| || || || ||| ||| |||||||||||| |||||||||| || Sbjct 549894 TAATAAAGTTTTTCCGGTTCCCGGTGCACCACATAATAATGCACCTTTTGGTATTTTTGC 549953 Query 11679 ACC 11681 ||| Sbjct 549954 ACC 549956 Score = 91.5 bits (100), Expect = 2e-13 Identities = 185/271 (68%), Gaps = 8/271 (3%) Strand=Plus/Minus Query 7456 ATCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACC 7515 ||| |||||||| || || || |||| || || ||||| || ||||| | ||| Sbjct 1085776 ATCAAAATCTTCTCCTCCTAAAGAGGTATTTCCATTTGTGGCTTTTACCTCAAAAACACC 1085717 Query 7516 TCCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTAC 7575 |||| || | ||| | ||||||||||| ||||| || || | |||| ||| || Sbjct 1085716 TCCTAATATTTCTAAAATTGAAACATCAAATGTACCTCCTCCTAAGTCATAAACAGCTAT 1085657 Query 7576 GTTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTC 7635 | || | || |||| |||| | ||| | || | ||| || || |||||||| Sbjct 1085656 GACTTTACCATCA-CTTTTTTCTAA-----ACCAAAAGCTAAAGCAGCTGCAGTTGGTTC 1085603 Query 7636 ATTAATAATAC-GAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTC 7694 ||||||||| | || ||| | || || ||||| | | |||||||| || ||||| | Sbjct 1085602 ATTAATAATTCTTAAAACA-TCTAGCCCTGCAATTTTACCAGCATCTTTTGTGGCTTGCC 1085544 Query 7695 GTTGCGAATCGTTAAAGTAGGCCGGGACCGT 7725 ||| ||||| ||||| || || || || || Sbjct 1085543 TTTGTGAATCATTAAAATATGCAGGCACAGT 1085513 >seq13 Length=2459074 Score = 98.7 bits (108), Expect = 1e-15 Identities = 168/244 (69%), Gaps = 0/244 (0%) Strand=Plus/Plus Query 11438 TACTTCTTTTCTTACCAATCGCATCAATTTCATCTATAAAGATAATACACGGTTGATTTT 11497 |||||||||| ||| | ||||| |||||||| ||||| | |||||| ||| || || Sbjct 1118864 TACTTCTTTTAGAACCTACTGCATCTATTTCATCAATAAAAACAATACAAGGTGCATGTT 1118923 Query 11498 CACGTGCCAATTCAAATATATCACGGACTCTTTTTGCGCCTACGCCTACAAACATTTCAA 11557 ||| || ||| | || | | |||| |||| ||||| || ||||||||||| Sbjct 1118924 TTTTTGCAGTTTGAAAAAGCTCTCTTATTCTTCTTGCACCTACACCAACAAACATTTCTT 1118983 Query 11558 CGAACGATGACCCCGAACACTGAATAAAAGGAACGGAAGATTCACCCGCTATAGCACGTG 11617 | || ||| || || || ||||| || || | ||| || || ||||| | | Sbjct 1118984 CAAATTCTGAACCAGATGCTTGGATAAAGGGTACATTTGCTTCCCCTGCAATAGCCCTAG 1119043 Query 11618 CTAAAAGTGTTTTACCTGTACCTGGTTTACCTGTTAATAATGCACCCCTTGGTATTTTAG 11677 | | | |||||| ||||| || |||| ||||| ||||||| ||| | || | ||| | Sbjct 1119044 CAATTAATGTTTTTCCTGTTCCAGGTTCACCTGATAATAATATACCTTTGGGCAATTTTG 1119103 Query 11678 CACC 11681 |||| Sbjct 1119104 CACC 1119107 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 635129275012960