Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmodium_20chabaudi_20chabaudi_20[genbank_20GCA_5F900095605.1_2020 16-11-23] 444 sequences; 18,919,436 total letters Query= NC_020864.1 Length=205622 Score E Sequences producing significant alignments: (Bits) Value seq7 571 8e-158 seq8 336 3e-87 seq6 221 2e-52 seq11 150 2e-31 seq9 116 5e-21 >seq7 Length=1041357 Score = 571 bits (632), Expect = 8e-158 Identities = 1117/1631 (68%), Gaps = 21/1631 (1%) Strand=Plus/Minus Query 195299 GCTATTGGTATCGATTTAGGAACTACTTACTCATGTGTTGGTGTATGGCAAAATGATCGT 195358 ||||| |||||||||||||| || |||||||| ||||||||||||||| |||||| | Sbjct 686075 GCTATAGGTATCGATTTAGGTACCACTTACTCCTGTGTTGGTGTATGGAGAAATGAAAAT 686016 Query 195359 GTAGAGATTATCCCGAATGACCAAGGAAACCGTACAACTCCATCGTACGTTGCCTTTACA 195418 || || || || | || || ||||| ||| | ||||| ||||| || ||||| || || Sbjct 686015 GTTGATATAATTGCTAACGATCAAGGTAACAGAACAACCCCATCCTATGTTGCTTTCACT 685956 Query 195419 GATAATGAACGTCTCGTTGGAGATGCCGCAAAAAATCAGACAGCTATGAACCCTATCAAT 195478 |||| ||| | | |||| ||||| || |||||||| || | || || ||| Sbjct 685955 GATACAGAAAGATTAATTGGTGATGCAGCTAAAAATCAAGTTGCAAGAAATCCAGAAAAT 685896 Query 195479 ACTGTCTTTGACGCGAAGCGTCTTATTGGTCGCAAGTTTTCGGATAAGAAAGTCCAAGAC 195538 || ||||| || || || | | || || | || ||| | || || ||| Sbjct 685895 ACAGTCTTCGATGCAAAAAGATTAATAGGAAGGAAATTTACAGAATCTTCTGTACAAAGT 685836 Query 195539 GATATAAAGGACTGGTCTTATGAAGTTGTTCCCGGTGTGGCTGATAAGCCTATGATTAAT 195598 ||||| || ||||| | | | ||| | ||| | | || || ||||||||| | Sbjct 685835 GATATGAAACACTGGCCATTTACAGTCAAATCAGGTATTGAAGAAAAACCTATGATTGAA 685776 Query 195599 GTTGAATTTCACGGTGAGAAGAAACAATTTGCTCCCGAAGAAATTTCGTCTATGGTGTTG 195658 |||| | ||| |||||||| ||| |||| || ||||||||||| |||||||| || Sbjct 685775 GTTGTTTATCAAGGTGAGAAAAAATTATTTCACCCTGAAGAAATTTCTTCTATGGTTTTA 685716 Query 195659 ATTAAGATGAAGGAGACTGCGGAATCTTTCATGGGTAAAACTGTGAAAGATGCAGTTGTG 195718 || ||||| || | ||| ||| | || | || ||| || | ||| ||||||| | Sbjct 685715 CAAAAAATGAAAGAAAATGCAGAAGCCTTTTTAGGAAAATCTATAAAAAATGCAGTCATC 685656 Query 195719 ACTGTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCTGCTGCTATT 195778 || |||||||| || || | || || ||| | || || ||||| || |||| | | ||| Sbjct 685655 ACAGTACCTGCATATTTTAACGACTCTCAAAGGCAAGCAACAAAAGATGCTGGTACAATT 685596 Query 195779 GCGGGTCTAAACTGTCTTAGAATTATCAATGAACCAACAGCGGCTGCAATTGCTTATGGT 195838 || || |||| | | |||||||| ||||||||||| || || || ||||| |||||| Sbjct 685595 GCAGGATTAAATGTTATGAGAATTATAAATGAACCAACTGCAGCAGCTATTGCATATGGT 685536 Query 195839 CTGGACAAGAACAAGGACGA--AGATAAAAATGTATTGATCTTTGATCTCGGTGGTGGTA 195896 | |||| || |||| | ||| |||||| | || || || ||| | || ||||||| Sbjct 685535 TTACACAAAAA--AGGAAAAGGAGAAAAAAATATTTTAATTTTCGATTTAGGAGGTGGTA 685478 Query 195897 CGTTTGATGTCTCACTTCTCAATATTGAAGGTGGTATATTCGAAGTAAAGGCTACTGCTG 195956 | |||||||| ||| | || | |||||||| ||||||||||||||| || || || || | Sbjct 685477 CTTTTGATGTTTCATTACTTACTATTGAAGATGGTATATTCGAAGTTAAAGCAACAGCAG 685418 Query 195957 GTGATACTCATCTAGGTGGTGAAGATTTCGATGCACGTCTTCTCCGTCATTTG-TCTGAT 196015 | ||||| ||| |||||||||||||||| ||| ||| || | |||| ||| Sbjct 685417 GAGATACCCATTTAGGTGGTGAAGATTTTGATAACCGT-TTAGTAAACTTTTGCGTTGAA 685359 Query 196016 GAGTTCCGTCGAAAGAATA-AG--AAAGATATTTCTGGAAATCCTAGGGCTCTTCGTCGG 196072 || || |||| |||| || |||||| | || |||| ||| ||| | | | Sbjct 685358 GATTTTAAAAGAAAAAATAGAGGCAAAGATTTATCAAAAAATAGTAGAGCTTTAAGAAGA 685299 Query 196073 CTTAGGACTGCATGTGAACGTGCCAAACGAACTCTCTCTTCTACGGCTCAAACAATGGTT 196132 | || || ||||||| | || ||||| || | |||||| | ||||| ||| || Sbjct 685298 TTAAGAACACAATGTGAAAGAGCAAAACGTACCTTATCTTCTTCAACTCAAGCAACAATT 685239 Query 196133 GAGATTGATTCGTTGTTTGACGGAATTGACTTCTA-TACAACTATTACCCGTGCACGTTT 196191 || |||||||| | ||||| || ||||| || || | ||| ||| | || | || Sbjct 685238 GAAATTGATTCTCTTTTTGAAGGTATTGA-TTATAGTGTAACAGTTAGTAGAGCTAGATT 685180 Query 196192 TGAAGAGTTAAACTCTGATTTGTTTAGGAAGTGTATGGA-ACCTGTTGAACAAGTACTTC 196250 |||||| ||| ||| | |||| || | || | |||||||||| |||| | Sbjct 685179 TGAAGAATTATGTATTGACTATTTTA-GAGATACATTAATACCTGTTGAAAAAGTTTTAA 685121 Query 196251 GTGACGCAAAGATGGATAAGTCTAAGGTTGATGAAATTGTCCTTGTGGGAGGATCAACCC 196310 || || | |||||| || | ||| ||||| ||||| | || || ||||| || Sbjct 685120 AAGATGCCATGATGGACAAAAAGAGTGTTCATGAAGTTGTCTTAGTTGGTGGATCTACAA 685061 Query 196311 GTATTCCGAAGATTCAACAGATGCTTTCTAG-CTTCTTCAATAATAAAGATTTAAACAAA 196369 | ||||| || |||||| | || | || ||||| ||| |||||| | || | Sbjct 685060 GAATTCCAAAAATTCAA-ACATTAATAAAAGAATTCTTTAATGGTAAAGAAGCATGCAGA 685002 Query 196370 ACGATCAACCCGGATGAAGCAGTTGCTTATGGTGCGGCCGTTCAGGCTGCTATTCTCTCA 196429 | ||||| || |||||||| |||||||||||||| || || || || || ||| | ||| Sbjct 685001 TCAATCAATCCTGATGAAGCTGTTGCTTATGGTGCTGCTGTCCAAGCCGCCATTTTATCA 684942 Query 196430 GGTGTTGACAAT--AATAACGTCCAAGATCTTCTGCTACTTGATGTTGCACCCGTATCCC 196487 |||| | |||| ||| || |||||| | | || | ||||| || |||| Sbjct 684941 GGTGAT--CAATCCAATGCAGTACAAGATTTATTATTATTAGATGTCTGTTCCTTATCTT 684884 Query 196488 TGGGTCTTGAAACAGCGGGTGGTGTTATGACTAAAATTATTGATAGGAACACAACTATTC 196547 | || | ||||| || || ||||||||||| ||| | ||||| || || ||||| |||| Sbjct 684883 TAGGATTAGAAACTGCAGGAGGTGTTATGACAAAATTAATTGAAAGAAATACAACAATTC 684824 Query 196548 CGACTAAGAAGGAACAAGTCTTTTCAACGTATTCCGATAATCAACCAGGTGTTCATATTC 196607 | | || || ||| | ||| | || ||| | ||||||||||||||||| || | Sbjct 684823 CAGCAAAAAAAAGTCAAATTTTTACCACCTATGCTGATAATCAACCAGGTGTGTTAATAC 684764 Query 196608 AAGTATATGAAGGAGAACGCTCCCGTGCAAAGGATAACCATCTACTTGG-AACTTTCGAT 196666 ||||||||||||||||| | || | || ||||| | || | || || |||| || Sbjct 684763 AAGTATATGAAGGAGAAAGAGCCTTAACCAAAGATAATAACTTATTAGGTAAATTTC-AT 684705 Query 196667 TTGACGGGGATTCCAGCTGCACCCAGAGGTGTTCCACAGATTAATGTTTGCTTCGATATA 196726 || || |||||| |||| || ||| |||||||| || | ||| ||| ||||| Sbjct 684704 TTAGATGGTATTCCACCTGCTCCTAGAAAGGTTCCACAAATCGAAGTTACCTTTGATATT 684645 Query 196727 GACGCAAATGGAATTCTAAACGTCACAGCTGAGGACAAGGCTTCTGGCAAATCTGAAAAG 196786 || |||||||| || |||| |||||||||| || || | | || ||| | | Sbjct 684644 GATGCAAATGGTATCTTAAATGTCACAGCTGTTGAAAAAAGTACAGGTAAACAAAATCAT 684585 Query 196787 ATTGTGATTACCAATGACAAGGGGCGGCTTTCTAAGGAGGAAATTGAACGTATGGTTCAA 196846 || ||||| |||||||| || | | ||| || |||||||| | |||||| | Sbjct 684584 ATCACAATTACTAATGACAAAGGTAGATTATCTCCTGAAGAAATTGATAGAATGGTTAAT 684525 Query 196847 GATGCGGAAAAGTACAGGGAAGAAGACGAGGTATATGAGAAACAGATGAAAGCTATAAAT 196906 ||||| ||||| || | | |||||| || | | || | ||| || |||| | ||| Sbjct 684524 GATGCTGAAAAATATAAAGCAGAAGATGAAGAAAATAAAAAAAGAATTGAAGCAAGAAAC 684465 Query 196907 GATCTAGAAAA 196917 ||| ||||| Sbjct 684464 AGTCTTGAAAA 684454 >seq8 Length=1320916 Score = 336 bits (372), Expect = 3e-87 Identities = 1029/1572 (65%), Gaps = 48/1572 (3%) Strand=Plus/Plus Query 195301 TATTGGTATCGATTTAGGAACTACTTACTCATGTGTTGGTGTATGGCAAAATGATCGTGT 195360 |||||||||||||||||| ||||||||| ||||||||||||| |||||| | || Sbjct 731729 TATTGGTATCGATTTAGGTACTACTTACAGTTGTGTTGGTGTATTTAAAAATGGAAGAGT 731788 Query 195361 AGAGATTATCCCGAATGACCAAGGAAACCGTACAACTCCATCGTACGTTGCCTTTACAGA 195420 || || | ||||| ||| ||||||| |||||||| || || | ||| || Sbjct 731789 TGAAATATTAAACAATGATTTAGGTAACCGTATTACTCCATCATATGTATCATTTGTTGA 731848 Query 195421 TAATGAACGTCTCGTTGGAGATGCCGCAAAAAATCAGACAGCTA---TGAACCCTA-TCA 195476 | ||| | ||||| || || || ||| | ||| ||||| | |||| | ||| Sbjct 731849 TGGAGAAAGGAAAGTTGGTGAAGCAGCTAAA--TTAGA-AGCTACTTTACACCCAACTCA 731905 Query 195477 ATACTGTCTTTGACGCGAAGCGTCTTATTGGTCGCAAGTTTTCGGATAAGAAAGTCCAAG 195536 | ||||| ||||| | ||| | ||||| ||| | || ||| ||||| |||| | Sbjct 731906 A-ACTGTATTTGATGTTAAGAGACTTATAGGTAGGAAATTTGATGATAAAGAAGTTGTAA 731964 Query 195537 ACGATATAAAGGACTGGTCTTATGAAGTTGTTCCCGGTGTGGCTGATAAGCCTATGATTA 195596 | |||| || | | |||||| | || | || | | || || | || | Sbjct 731965 AAGATAGAACTTTATTACCATATGAAATAGTAAACAATGAAGGT---AAACCAAATATCA 732021 Query 195597 ATGTTGAATTTCACGGTGAGAAGAAACAA-----TTTGCTCCCGAAGAAATTTCGTCTAT 195651 ||| || | | ||| || | | ||||| || ||| ||||| |||| Sbjct 732022 GAGTTCAAATAAA-----AGACAAACCCACTACTTTTGCACCTGAACAAATTAGTGCTAT 732076 Query 195652 GGTGTTGATTAAGATGAAGGAGACTGCGGAATCTTTCATGGGTAAAACTGTGAAAGATGC 195711 ||| || || ||||| || | ||| |||| || |||||||| | || ||| |||| Sbjct 732077 GGTTTTAGAAAAAATGAAAGAAATTGCTCAATCCTTTTTGGGTAAACCCGTAAAAAATGC 732136 Query 195712 AGTTGTGACTGTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCTGC 195771 ||||| ||||||||||| || |||| |||| ||||| |||| || ||||| || |||| Sbjct 732137 TGTTGTTACTGTACCTGCATATTTCAATGATGCACAAAGACAAGCTACAAAAGATGCTGG 732196 Query 195772 TGCTATTGCGGGTCTAAACTGTCTTA-GAATTATCAATGAACCAACAGCGGCTGCAATTG 195830 ||| ||||| || |||| | | || | ||||| |||||||| || || ||||| | | Sbjct 732197 TGCAATTGCTGGATTAAA-TATAGTACGTATTATTAATGAACCCACCGCTGCTGCTTTAG 732255 Query 195831 CTTATGGTCTGGACAAGAACAAGGACGAAGATAAAAATGTATTGATCTTTGATCTCGGTG 195890 |||||||| | || || || ||||| | || | | || | | ||| | || | Sbjct 732256 CTTATGGTTTAGATAAAAAA------GAAGAAACAAGTATTTTAGTATACGATTTAGGAG 732309 Query 195891 GTGGTACGTTTGATGTCTCACTTCTCAATATTGAAGGTGGTATATTCGAAGTAAAGGCTA 195950 ||||||| |||||||| || || | |||||| |||| |||| ||||| | || | Sbjct 732310 GTGGTACTTTTGATGTTTCTATTTTAGTTATTGATAATGGTGTATTTGAAGTCTATGCAA 732369 Query 195951 CTGCTGGTGATACTCATCTAGGTGGTGAAGATTTCGATGCACGTCTTCTCCGTCATTTGT 196010 | || ||| ||||||| |||| ||||||||||| ||| | | || | |||| | Sbjct 732370 CAGCAGGTAATACTCACTTAGGAGGTGAAGATTTTGATCAAAGAGTTATGGACTATTT-T 732428 Query 196011 CTGATGA-GTTCCGTCGAAAGAATAAGAAAGATATTTCTGGAAATCCTAGGGCTCTTCGT 196069 | | | ||| ||| ||||| | |||| || | || || ||| ||| Sbjct 732429 ATAAAAATGTTTAAAAAAAAAAATAATATAGATCTTAGATCAGATAAAAGAGCTATTCAA 732488 Query 196070 CGGCTTAGGACTGCATGTGAACGTGCCAAACGAACTCTCTC--TTCTACGGCTCAA-ACA 196126 | || | | | |||| ||| ||| ||| | || || | | ||||| ||| Sbjct 732489 AAATTAAGAAAAGAAGTTGAAATTGCAAAAAGAAACTTATCAGTTGTTCA-CTCAACACA 732547 Query 196127 ATGGTTGAGATTGATTCGTTGTTTGACGGAATTGACTTCTATACAACTATTACCCGTGCA 196186 | |||| ||||| | |||| ||| | |||| | ||| | || | || Sbjct 732548 AA--TTGAAATTGAAGATATAGTTGAAGGACATAACTTTTCAGAAACATTAACAAGAGCC 732605 Query 196187 CGTTTTGAAGAGTTAAACTCTGATTTGTTTAGGAAGTGTATGGAACCTGTTGAACAAGTA 196246 |||||||| ||||| |||||| ||||| | | | ||||||||| || ||||| Sbjct 732606 AAATTTGAAGAATTAAATGATGATTTATTTAGAGAAACTTTAGAACCTGTTAAAAAAGTA 732665 Query 196247 CTTCGTGACGCAAAG-ATGGATAAGTCTAAGGTTGATGAAATTGTCCTTGTGGGAGGATC 196305 | ||| ||||| ||| | || | || | ||||||||||| | || ||||| || Sbjct 732666 TTAGATGATGCAAAATATGAAAAAAGCAAAA-TCGATGAAATTGTTTTAGTAGGAGGTTC 732724 Query 196306 AACCCGTATTCCGAAGATTCAACAGATGCTTTCTAGCTTCTTCAATAATAAAGATTTAAA 196365 ||| ||||| || || |||||||| || || || ||||| |||||| ||| Sbjct 732725 AACTCGTATACCTAAAATTCAACAAATTATTAAAGAGTTTTTCAACGGTAAAGAACCAAA 732784 Query 196366 CAAAACGATCAACCCGGATGAAGCAGTTGCTTATGGTGCGGCCGTTCAGGCTGCTATTCT 196425 | | || ||||| |||||||| || || |||||||| || |||| |||| |||| | Sbjct 732785 TAGAGGTATTAACCCAGATGAAGCCGTAGCATATGGTGCTGCTATTCAAGCTGGTATTAT 732844 Query 196426 CTCAGGTGTTGACAATAATAACGTCCAAGATCTTCTGCTACTTGATGTTGCACCCGTATC 196485 | || || || ||| | |||||| || | | | |||||| | || || | Sbjct 732845 TTTAG-----GAGAAGAAT----TACAAGATGTTGTATTGTTAGATGTTACTCCATTAAC 732895 Query 196486 CCTGGGTCTTGAAACAGCGGGTGGTGTTATGACTAAAATTATTGATAGGAACACAACTAT 196545 | ||| ||||||| | |||||| |||||||| || | ||| | || || ||| ||| Sbjct 732896 TTTAGGTATTGAAACTGTTGGTGGTATTATGACTCAATTAATTAAAAGAAATACAGTTAT 732955 Query 196546 TCCGACTAAGAAGGAACAAGTCTTTTCAACGTATTCCGATAATCAACCAGGTGTTCATAT 196605 || || || || |||| ||||||||| ||| ||||| ||||||| |||| || Sbjct 732956 CCCAACAAAAAAATCACAAACCTTTTCAACCTATCAAGATAACCAACCAGCTGTTTTAAT 733015 Query 196606 TCAAGTATATGAAGGAGAACGCTCCCGTGCAAAGGATAACCATCTACTTGGAACTTTCGA 196665 |||||| | |||||||||| | | | || ||||||||| || | |||| || || Sbjct 733016 TCAAGTCTTTGAAGGAGAAAGAGCATTAACTAAAGATAACCATTTATTAGGAAAATTTGA 733075 Query 196666 TTTGACGGGGATTCCAGCTGCACCCAGAGGTGTTCCACAGATTAATGTTTGCTTCGATAT 196725 || | || |||||| |||||| |||||||| || | || | ||| || | | Sbjct 733076 ATTATCTGGTATTCCACCTGCACAAAGAGGTGTACCTAAAATCGAGGTTACATTTACTGT 733135 Query 196726 AGACGCAAATGGAATTCTAAACGTCACAGCTGAGGACAAGGCTTCTGGCAAATCTGAAAA 196785 ||| ||| || ||| || | || ||| || || || | | || ||| | || Sbjct 733136 CGACAAAAACGGTATTTTACATGTTGAAGCAGAAGATAAAGGAACAGGAAAAAGTAAAGG 733195 Query 196786 GATTGTGATTACCAATGACAAGGGGCGGCTTTCTAAGGAGGAAATTGAACGTATGGTTCA 196845 || ||||| |||||||| || | | || || || |||| ||| ||| || | Sbjct 733196 TATAACTATTACTAATGACAAAGGTAGATTATCAAAAGAACAAATAGAAAAAATGATTAA 733255 Query 196846 AGATGCGGAAAA 196857 ||||| ||||| Sbjct 733256 CGATGCTGAAAA 733267 >seq6 Length=837512 Score = 221 bits (244), Expect = 2e-52 Identities = 1036/1619 (64%), Gaps = 42/1619 (3%) Strand=Plus/Plus Query 77951 CCTCAATACTTATTCATGCGTGTTTCTATTGGTATTCATGGAAATGATATTCCAGCGGTA 78010 ||||| | ||||| ||| | || ||||| || || ||| | ||||| || | || Sbjct 429253 CCTCAGCATTTATTAATGAGAGTATCTATAGGAATACATATAGATGATCTTGAAAAGGCT 429312 Query 78011 CTTGAAACGTATGATAAAATGTC-CAATGGTATGTTTATTCACGCAACACCTACTTTGTT 78069 | ||||| ||| || |||||| ||| ||| |||| ||| || || ||||| || || Sbjct 429313 TTAGAAACTTATCATTTAATGTCACAAAAATAT-TTTACTCATGCTACTCCTACATTATT 429371 Query 78070 TAATGCAGGTACTCCCCGTCCACAGATGTCATCTTGTTTCCTACTTGCAAATAAGGAGGA 78129 |||| | || || || | || || ||||| || || || || | ||| || || Sbjct 429372 TAATTCGGGAACACCAAGACCCCAAATGTCTTCATGCTTTTTATTATCAATGAAATCTGA 429431 Query 78130 CTCTATTAATGGTATATACGGGACTCTCACAGAGTGTGCTCAGATTTCTAAGTGGGCTGG 78189 || || | ||||||| | || | | | ||||| |||| ||| || || Sbjct 429432 TTCAATAGAAGGTATATTTGAAACATTAAAGCAATGTGCATTGATTAGTAAAACAGCAGG 429491 Query 78190 TGGTATAGGTCTTCATATTCACGATGTTCGTGCAAACAAGTCCAGGATTAGAGGAACTAA 78249 ||||||||| | | | || ||| || | || | || || || ||||||||||| Sbjct 429492 AGGTATAGGTGTGGCTGTACAAGATATTAGAGCTCAAAATTCTTACATCAGAGGAACTAA 429551 Query 78250 TGGTCAGTCTGATGGAATTATTCCTATGCTTAGGGTATTCAATGCTACAGCACGCTATGT 78309 |||| || |||| | | || ||| | || || || |||| ||||||| | ||||| Sbjct 429552 TGGTATATCAAATGGTTTAGTCCCGATGTTAAGAGTTTTTAATGATACAGCAAGATATGT 429611 Query 78310 CAACCAAGCGGGTCGTA---GGAAGGGGTCATTCGCTATGTACCTTGAACCTTGGCACGC 78366 | |||| || | | | || || || || ||| | || ||||||| ||||| | Sbjct 429612 AGATCAAGGTGGAGGAAAAAGAAAAGGTTCTTTTGCTGTATATGTTGAACCATGGCATTC 429671 Query 78367 CGATGTAATGGATTTTTTGGAACTTCGTCTCAACCAGGGTGACGAGGAAGCTCGATGCAG 78426 ||| | | || ||||| || | | || || ||| | || ||| || | Sbjct 429672 AGATATTTTTGAATTTTTAGATTTAAGAAAAAATCATGGTAAAGAAGAATTGAGAGCTCG 429731 Query 78427 GGATTTATTCACTGCTATGTGGATTCCGGATCTTTTTATGAAGAGAGTTGAGGAAGGAGG 78486 |||||||| |||||| ||| | || ||| | |||||||| ||||| ||||| Sbjct 429732 TGATTTATTTTATGCTATTTGGGTACCTGATTTATTTATGAAAAGAGTAAAGGAAAATAA 429791 Query 78487 TAAATGGTCTCTTTTCTGTCCAGATAAGACTAAGGGTCTTTCAGATGTATACGGGG---A 78543 || ||| || | | || || || | | || || || || | | ||| | Sbjct 429792 GAACTGGACTTTAATGTGCCCTAATGAATGTCCAGGC--TTAAG-TGAAACCTGGGGTGA 429848 Query 78544 AGAATTCGAAAAATTGTACACTAAATACGAAGAGGAAGGTCTCGCTATTAAGACAATTGA 78603 |||||| |||||||| || || ||||||||||| ||| ||| | | || |||||| Sbjct 429849 AGAATTTGAAAAATTATATACAAAATACGAAGAAGAAAATCTTGGAAAAAAAACAATTCT 429908 Query 78604 TGCATCTGAACTATGGAAAGCTATTATCAAAAGTCAAACAGAGACCGGCACCCCGTATAT 78663 |||| || ||||| ||||| | |||| |||| ||| || || || ||||| Sbjct 429909 TGCACAAGATTTATGGTTTGCTATATTACAAAGCCAAATAGAAACTGGTGTACCATATAT 429968 Query 78664 GCTATACAAAGACAGCTGTAACAGAAAGTCTAACCAAAAGAACCTAGGTGTCATCAAAAG 78723 | |||| ||||| ||||| || || || ||||| || |||| || ||| | Sbjct 429969 GTTATATAAAGATGCATGTAATTCTAAATCGAATCAAAAAAATTTAGGAACAATTAAATG 430028 Query 78724 CTCTAACCTTTGCACAGAAATTCTGGAATACACGGATAA--GAATGAAACAGCTGTATGT 78781 | ||| | || |||||| | ||||| || || | ||||| |||||| ||| Sbjct 430029 CAGTAATTTATGTTGTGAAATTATTGAATATAC--ATCACCTGATGAAGTAGCTGTTTGT 430086 Query 78782 AATCTAGGGTCTATCGCTCTACCAAAGTTTGTTGATCGAGAATTAAAGACATTTGATTAT 78841 ||| ||| || || || || || ||||||||| ||||| ||| |||| ||| | Sbjct 430087 AATTTAGCTTCCATTGCATTATGCAAATTTGTTGATAGAGAAAAAAAAGAATTTAATTTT 430146 Query 78842 TCAAAGCTCCACGAAATTACAAAAATCGTAACTAAAAATTTAAATCGTGTAATTGACCGT 78901 ||| | | || ||||| ||||| | |||| ||||||| || | ||||| | Sbjct 430147 AAAAAATTATATGATATTACTAAAATTATTACTAGAAATTTAGATAAAATTATTGAAAGA 430206 Query 78902 AACTACTACCCAGTCGAGACTGCTAAATATTCTAATATGAAACATAGACCAATTGGTCTA 78961 || || || ||||| | || || || |||| | ||||||||| ||||| || Sbjct 430207 AATTATTATCCAGTTAAAGAAGCGGAAAGATCAAATAAAAGACATAGACCTATTGGAATA 430266 Query 78962 GGTGTTCAAGGATTGGCAGATGTATTCA-ACTTGTGTGGTCTTCCCTTCGATTGCGAAGA 79020 || || |||||||| |||||| ||| | ||| | | | ||| | || | ||||| Sbjct 430267 GGAGTACAAGGATTAGCAGATACATTTATGCTTTTAAGAT-ATCCATATGAATCTGAAGA 430325 Query 79021 TTC-AAGGACTATGAATGCTCATATTTTCGAGACTATTTATCATGCAGCTTTAGAA--GC 79077 | || || | | ||| || || || ||||| ||| |||| ||||||||| | Sbjct 430326 AGCTAAAGAAT-TAAATAGAAGAATATTTGAAACTATGTATTATGCTGCTTTAGAAATGT 430384 Query 79078 AAGTTCAGAACTTGCTGAAATTAATGGGCCTTATGAGAGTTTCGAGGGTTCACCCGCTTC 79137 ||| ||| | || || | | ||| || ||||| | | ||| || || Sbjct 430385 CTGTT--GAATTGGCACAAGTAAGTGGACCATATGAATCATATCAAGGTAGTCCAGCAAG 430442 Query 79138 ACAAGGTCTTCTTCAACCAGATCTATGGGAAGGTGAAG-CTA-AATACAGTGGTCGTTAC 79195 ||||| | | ||| ||| | ||| | | ||| | | |||| | || Sbjct 430443 CCAAGGAATATTACAATTTGATATGTGGAATGCAAAAGTCGATAATAAA-----TATTGG 430497 Query 79196 GATTGGGATGCAATGAGAAAGCGTGTAATGACGAAGGGTCTGAGAAACAGTCTTCTCGTA 79255 ||||||||| | | | ||| ||| | | || | ||||| |||||| || Sbjct 430498 GATTGGGATTTATTAAAAAAAAAAATAAGTAAACATGGATTAAGAAATTCTCTTCTTTTA 430557 Query 79256 GCACCAATGCCCACTGCTTCGACGGCTCAGATCCTCGGTAATAATGAGTGTTTTGAACCA 79315 ||||| ||||| || ||||| ||| | || || | || |||||||| | ||||||||| Sbjct 430558 GCACCTATGCCAACAGCTTCAACGTCGCAAATTTTAGGAAATAATGAATCCTTTGAACCA 430617 Query 79316 TACACTACAAACATATATCTTCGTCGCACATTAGCTGGTGAATTTGTTGTGGTTAACAAA 79375 || || | ||||| ||| | || ||| |||||||||| |||| ||||| Sbjct 430618 TATACAAGTAACATTTATTACAGACGTGTTTTAAGTGGTGAATTTTTTGTTGTTAATCCT 430677 Query 79376 CATCTTGTT-GAAGAT-TTGAAGA-AGTTAGGTCTTTGGTCAAAAGAGATGA---AAGAC 79429 ||| ||||| ||||| || || || |||||||||| |||| |||| || | Sbjct 430678 CAT-TTGTTAAAAGATCTTTTTGATAG--AGGTCTTTGGGATGAAGATATGAAACAACAA 430734 Query 79430 TTAATGGTCAAAGCCGGAGGGAGTGTGCAAAACATAGTAGAGATACCAGATAATATTAAA 79489 ||||| | | | ||| ||||| ||| | || || ||||| | | | ||| Sbjct 430735 TTAATTGCCCATAATGGA---AGTGTTCAATATATTAGCGAAATACCTAGTGACTTGAAA 430791 Query 79490 AATCTTTATAAGACTGTTTGGGAAATTAGCCAAAAATGTATTATCGACATGGCAGCGGA 79548 | | ||||| || ||||||||||| | |||||| |||||| |||||||| || || Sbjct 430792 GAGTTGTATAAAACCGTTTGGGAAATCAAACAAAAAAATATTATTGACATGGCTGCTGA 430850 Score = 170 bits (188), Expect = 3e-37 Identities = 168/217 (77%), Gaps = 0/217 (0%) Strand=Plus/Plus Query 171860 GTATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGT 171919 |||||||||||||||| ||||| | || |||||||| || || || || ||||| | | Sbjct 386264 GTATGCAAATCTTTGTAAAAACTTTAACCGGAAAAACAATTACTCTTGATGTTGAACCAT 386323 Query 171920 CAGACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATC 171979 | || || || || || | ||||| || ||||||||||| ||||| |||||||| |||| Sbjct 386324 CTGATACTATTGAAAATGTTAAAGCTAAAATTCAAGATAAAGAAGGTATTCCACCTGATC 386383 Query 171980 AGCAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACA 172039 | ||| || | ||||| ||||| ||||| | || |||||| | || || ||||||||| Sbjct 386384 AACAAAGATTAATTTTCGCTGGAAAACAATTAGAGGATGGAAGAACACTATCTGATTACA 386443 Query 172040 ACGTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAG 172076 || ||||||| || ||||| ||||| | ||| |||| Sbjct 386444 ACATTCAAAAAGAATCTACCTTACACTTAGTTTTAAG 386480 Score = 152 bits (168), Expect = 7e-32 Identities = 164/217 (76%), Gaps = 0/217 (0%) Strand=Plus/Plus Query 171860 GTATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGT 171919 ||||||| || || || ||||| | || || ||||| ||||| || || |||||| | | Sbjct 386492 GTATGCAGATTTTCGTAAAAACTTTAACCGGGAAAACAATCACTCTTGATGTTGAGCCAT 386551 Query 171920 CAGACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATC 171979 | || || || || || | ||||| || ||||||||||| ||||| ||||| || |||| Sbjct 386552 CTGATACCATTGAAAATGTTAAAGCTAAAATTCAAGATAAAGAAGGTATTCCTCCTGATC 386611 Query 171980 AGCAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACA 172039 | ||| || | |||||||| || ||||| | |||||||| | || || |||| |||| Sbjct 386612 AACAAAGATTAATTTTTGCCGGAAAACAATTAGAAGATGGTAGAACACTATCTGACTACA 386671 Query 172040 ACGTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAG 172076 || ||||||| || || ||| ||||| | ||| |||| Sbjct 386672 ACATTCAAAAAGAATCGACTTTACACTTAGTTTTAAG 386708 Score = 149 bits (164), Expect = 8e-31 Identities = 163/217 (75%), Gaps = 0/217 (0%) Strand=Plus/Plus Query 171860 GTATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGT 171919 |||||||||| || || ||||| | || |||||||| || || || || ||||| | | Sbjct 386720 GTATGCAAATTTTCGTAAAAACATTAACCGGAAAAACAATTACTCTTGATGTTGAACCAT 386779 Query 171920 CAGACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATC 171979 |||| || || || ||| | |||||||| ||||||||||| ||||| || ||||| |||| Sbjct 386780 CAGATACTATTGAAAACGTTAAAGCCAAAATTCAAGATAAAGAAGGTATCCCACCTGATC 386839 Query 171980 AGCAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACA 172039 | ||| || | ||||| ||||| ||||| | ||||| || | || | |||| || | Sbjct 386840 AACAAAGATTAATTTTCGCTGGAAAACAATTAGAAGACGGTAGAACATTATCTGACTATA 386899 Query 172040 ACGTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAG 172076 || ||||||| || ||||| |||| | ||| |||| Sbjct 386900 ACATTCAAAAAGAATCTACCTTACATTTAGTTTTAAG 386936 Score = 127 bits (140), Expect = 3e-24 Identities = 141/188 (75%), Gaps = 0/188 (0%) Strand=Plus/Plus Query 171889 GGAAAAACTATCACCCTCGAGGTTGAGTCGTCAGACACAATCGATAACATCAAAGCCAAG 171948 ||||||||||| ||||| || |||||| | || || || || || || | ||||| || Sbjct 386065 GGAAAAACTATAACCCTTGATGTTGAGCCATCCGATACCATTGAAAATGTTAAAGCTAAA 386124 Query 171949 ATTCAAGATAAGGAAGGCATTCCACCCGATCAGCAACGACTTATTTTTGCTGGTAAACAG 172008 ||||||||||| ||||| || ||||| ||||| ||| || | ||||||||||| || || Sbjct 386125 ATTCAAGATAAAGAAGGTATCCCACCTGATCAACAAAGATTAATTTTTGCTGGAAAGCAA 386184 Query 172009 CTTGAAGATGGACGTACCCTCGCTGATTACAACGTTCAAAAGGAGTCTACTCTACACCTT 172068 | ||||| || | || | |||| || ||| ||||||| || ||||| |||| | Sbjct 386185 TTAGAAGACGGTAGAACATTATCTGACTATAACATTCAAAAAGAATCTACCTTACATTTA 386244 Query 172069 GTTCTAAG 172076 ||| |||| Sbjct 386245 GTTTTAAG 386252 >seq11 Length=1651515 Score = 150 bits (166), Expect = 2e-31 Identities = 155/203 (76%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 |||||||||||||| ||||| | || |||||||| ||||| || || ||||| | || Sbjct 1491087 ATGCAAATCTTTGTAAAAACATTAACCGGAAAAACAATCACTCTTGATGTTGAACCATCT 1491028 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981 || ||||| || || | ||||| || || |||||||| ||||| ||||| || ||||| Sbjct 1491027 GATACAATTGAAAATGTTAAAGCAAAAATCCAAGATAAAGAAGGAATTCCCCCTGATCAA 1490968 Query 171982 CAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAAC 172041 ||| || | ||||| ||||| ||||| | ||||||||| | || | |||| || ||| Sbjct 1490967 CAAAGATTAATTTTCGCTGGAAAACAATTAGAAGATGGAAGAACATTATCTGACTATAAC 1490908 Query 172042 GTTCAAAAGGAGTCTACTCTACA 172064 ||||||| ||||| || |||| Sbjct 1490907 ATTCAAAAAGAGTCAACCTTACA 1490885 >seq9 Length=1306843 Score = 116 bits (128), Expect = 5e-21 Identities = 231/333 (69%), Gaps = 18/333 (5%) Strand=Plus/Plus Query 195662 AAGATGAAGGAGACTGCGGAATCTTTCATGGGTAAAACTGTGAAAGATGCAGTTGTGACT 195721 || ||||| || ||||| ||| || | | || | || || | | |||||| | ||| Sbjct 1085456 AAAATGAAAGAAACTGCTGAAAATTACTTAGGAAGAAAAGTACATCAAGCAGTTATTACT 1085515 Query 195722 GTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCTGCTGCTATTGCG 195781 || ||||| || || | |||||||||| | || || ||||| || |||| | ||||| Sbjct 1085516 GTGCCTGCATATTTTAATGATTCACAAAGGCAAGCCACAAAAGATGCTGGTAAAATTGCA 1085575 Query 195782 GGTCTAAACTGTCTTA-GAATTATCAATGAACCAACAGCGGCTGCAATTGCTTATGGTCT 195840 || ||| | ||| ||| ||||||| ||||||||||| || ||||| | |||| |||| | Sbjct 1085576 GGGCTAGA-TGTTTTAAGAATTATTAATGAACCAACTGCAGCTGCTTTAGCTTTTGGTTT 1085634 Query 195841 GGACAAGAACAAGGACGAAGATAAAAATGT-ATTGATCTT--TGATCTCGGTGGTGGTAC 195897 || || ||| || | |||| || || | | || ||| | || || ||||| Sbjct 1085635 AGA----AAAAAG--TGATGGTAAA---GTCATAGCTGTTTATGACTTAGGAGGAGGTAC 1085685 Query 195898 GTTTGATGTCTCACTTCT--CAATATTGAAGGTGGTATATTCGAAGTAAAGGCTACTGCT 195955 |||||||| ||| || | |||||| ||| ||| | || || ||||| || || | Sbjct 1085686 ATTTGATGTTTCAATTTTAGAAATATT--AGGAGGTGTTTTTGAGGTAAAAGCCACAAAT 1085743 Query 195956 GGTGATACTCATCTAGGTGGTGAAGATTTCGAT 195988 || |||| | |||| || |||||||| ||| Sbjct 1085744 GGAAATACCTCTTTAGGAGGAGAAGATTTTGAT 1085776 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 657858748863680