Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmodium_20chabaudi_20chabaudi_20[refseq_20GCF_5F900002335.2_20201 4-08-27] 39 sequences; 18,867,781 total letters Query= NC_014765.1 Length=198519 Score E Sequences producing significant alignments: (Bits) Value seq7 428 6e-115 seq8 235 7e-57 seq10 187 3e-42 seq6 154 2e-32 seq9 102 1e-16 seq13 95.1 2e-14 >seq7 Length=1169068 Score = 428 bits (474), Expect = 6e-115 Identities = 1105/1656 (67%), Gaps = 48/1656 (3%) Strand=Plus/Plus Query 6517 ATAACAGTAGTTTTCGAGACCATTCTTCGCCTCGAC-CTTTTTCGCGTACTTT--TCATC 6573 ||| || |||||||| |||| || | || || | |||||| || ||| ||||| Sbjct 768236 ATAGCAATAGTTTTCAAGACTGTTTCTTGCTTCAATTCTTTTTT---TATTTTCTTCATC 768292 Query 6574 TTCATCTTTATACTTTTCCGCATCTTGGACCATCTTTTCAATGTCTTCTTTCGATAATCT 6633 ||| ||||||| ||||| ||||| | ||||| | ||||| ||||| |||||||| Sbjct 768293 TTCTGCTTTATATTTTTCAGCATCATTAACCATTCTATCAATTTCTTCAGGAGATAATCT 768352 Query 6634 CCCCTTATCATTCGTAATCGTAATCT--TTTCGGATTTACCCGAGGCCTTATCTTCAGCA 6691 || || ||||| ||||| || || | ||| | |||||| | || || |||| Sbjct 768353 ACCTTTGTCATTAGTAATGGTGATATGATTTTG--TTTACCAGTACTTTTTTCAACAGCT 768410 Query 6692 CTTACATTCAAAATACCATTTGCATCAACATCGAACCTTACATTAATTTGTGGTGTACCC 6751 | ||||| || |||||||||||||||| ||| || | || | ||||||||| ||| Sbjct 768411 GTGACATTTAAGATACCATTTGCATCAATATCAAAGGTAACTTCAATTTGTGGA--ACCT 768468 Query 6752 CTC--GGTGCGGCTGGAATACCCGTTAAATCAAATGTACCAAGTAAACTGTTATCCGTCG 6809 || || || | ||||||||| ||||| |||| |||| | ||| | ||||| | | Sbjct 768469 TTCTAGGAGCAGGTGGAATACCATCTAAATGAAATTTACCTAATAAGTTATTATCTTTGG 768528 Query 6810 CCTT----CTTACGTTCACCTTCATAGACTTTAATTGTCACCGCAGGTTGATTATCTTGT 6865 || || | ||| |||||||| |||| ||| ||| | ||||||||||| Sbjct 768529 --TTAAGGCT--CTTTCTCCTTCATATACTTGTATTAACACACCTGGTTGATTATCAGCA 768584 Query 6866 GCCGTTGAGAAGATTTGTTCTTTCTTAGATGGAATCGTCGTATTTCTCGGAATAACCGGG 6925 || | || ||||| ||| || | |||||| || |||||||| ||| | Sbjct 768585 TAGGTGGTAAAAATTTGACTTTTTTTGGCTGGAATTGTTGTATTTCTTTCAATTAATTTT 768644 Query 6926 GTCATAATACCACCCATAGTTTCGAGTCCAAGAGACAGAGGTGTCACGTCCAAGAGTAAC 6985 ||||||| ||| || |||||| | ||| | ||| | | || || || | ||| Sbjct 768645 GTCATAACACCTCCTGCAGTTTCTAATCCTAAAGATAAGGAACAGACATCTAATAATAAT 768704 Query 6986 AGGTCTTGAACAG-ATTCGTTCCCTTCACCCGTTAAGATGGCGGCTTGGACCGTCGCCCC 7044 | ||||| || | ||| | | | |||| | ||| |||||||||||||| | || || Sbjct 768705 AAATCTTGTACTGCATTGGATTGAT-CACCTGATAAAATGGCGGCTTGGACAGCAGCACC 768763 Query 7045 GTATGCGACCGCCTCATCGGGGTTAATCGTTTT--ATTCAGTTCTTTACCGTTAAAATAA 7102 || || || || ||||| || || || | | | || | ||||||||| ||||| | Sbjct 768764 ATAAGCAACAGCTTCATCAGGATTGATTGATCTGCATGC--TTCTTTACCATTAAAGAAT 768821 Query 7103 TCCGATAACATTTGTTGAATTTTCGGGATTCGTGTCGATCCACCGACCAAAACGATTTCA 7162 || || | | ||||||||| || |||| ||| |||||||| || || || | |||| Sbjct 768822 TCTTTTATTAATGTTTGAATTTTTGGAATTCTTGTAGATCCACCAACTAAGACAACTTCA 768881 Query 7163 TTCACTTTCGATTTATCGATCTTTGAGTCTCGAAGTGTTTTTTCGACAGGT-TCCATACA 7221 | || || ||| || ||| | | ||| | |||||| |||||| | || | Sbjct 768882 TGAACACTCTTTTTGTCCATCATGGCATCTTTTAAAACTTTTTCAACAGGTATTAATGTA 768941 Query 7222 TTTACGGAACAAGTCCATACACAGTTCCTCAAAACGTGCACGGGTAATGGATGTATAGAA 7281 | | | || |||| ||||| | ||| ||||| | || | ||| | | | | Sbjct 768942 TCT-CTAAAATAGTCAATACATAATTCTTCAAATCTAGCTCTACTAACTGTTACACTATA 769000 Query 7282 ATCAACGCCGTCGTATAACGAATCAATTTCAATGGTTGTTTGTGCCGTCGAAGATAACGT 7341 ||||| || || | | |||||||||||||| |||| ||| | | |||||||| || Sbjct 769001 ATCAATACCTTCAAAAAGAGAATCAATTTCAATTGTTGCTTGAGTTGAAGAAGATAAGGT 769060 Query 7342 TCGCTTTGCGCGCTCACACGCCGTTCGTAAACGACGAAGGGCACGCGGGTTACCGGAAAT 7401 || ||||| | ||||| |||| ||| | | | || | || || | Sbjct 769061 ACGTTTTGCTCTTTCACATTGTGTTCTTAATCTTCTTAAAGCTCTACTATTTTTTGATAA 769120 Query 7402 ATCTTT--CT-TATGTTTACGTTTAAACTCTTCAGAG---AAGTGT-CGAAGGAGTCTCG 7454 |||||| || ||| ||| | |||||| |||||| | |||| | | || || Sbjct 769121 ATCTTTGCCTCTATTTTTTCTTTTAAAATCTTCAACGCAAAAGTTTACTAAACGGTT--- 769177 Query 7455 AATCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATAC 7514 ||| |||||||||||||| || || ||||| || || || ||||| ||||| || |||| Sbjct 769178 -ATCAAAATCTTCACCACCTAAATGGGTATCTCCTGCTGTTGCTTTAACTTCGAATATAC 769236 Query 7515 CTCCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTA 7574 | ||||||| | | || ||||||||||| |||||||| || | || ||||| | | Sbjct 769237 CATCTTCAATAGTAAGTAATGAAACATCAAAAGTACCACCTCCTAAATCGAAAATTAAAA 769296 Query 7575 CGTTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTT 7634 || | || | | | || || | | ||| || || ||||| || || ||||||| Sbjct 769297 TATTTTTTTCTCCTTTTCCTTTTTTGTGTAAACCATATGCAATAGCTGCTGCAGTTGGTT 769356 Query 7635 CATTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTC 7694 |||| ||||| | | | || | || ||||| || | |||||||| || ||||| | Sbjct 769357 CATTTATAATTCTCATAACATTTAATCCTGCAATTGTACCAGCATCTTTTGTTGCTTGCC 769416 Query 7695 GTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGA 7754 ||| ||||||||||| || || || || || | ||| || | | | || || | Sbjct 769417 TTTGAGAATCGTTAAAATATGCAGGTACTGTGATGACGGCATTTTTTATAGATTTTCCTA 769476 Query 7755 GATACGATTCCGCGATATCTTTCA-TTTTGGTAAGAACCATCGATGAAATCTCTTCAGCC 7813 | | | ||| || | ||||||| |||| |||| |||||| || ||||| ||||||| Sbjct 769477 AAAAGGCTTCTGCATTTTCTTTCATTTTTTGTAA-AACCATAGAAGAAATTTCTTCAGGG 769535 Query 7814 GCAAACTGTTTCGTTTCACCGTTAAAATCAACTTCAATCATGGGTTTATCCGCAGCACCG 7873 ||| ||| | ||||| | | || ||||||||||||| ||||| || || ||| Sbjct 769536 TGAAATAATTTTTTCTCACCTTGATAAACAACTTCAATCATAGGTTTTTCTTCAATACCT 769595 Query 7874 GGGATAACCTTATACGACCAATCTTTCATATCGTCTTGGACCTGTTG-GTCCGAAAACTT 7932 | | || || | | ||| | ||||||||| ||| | ||| | || | ||| || Sbjct 769596 GATTTGACTGTAAATGGCCAGTGTTTCATATC-ACTTTGTACTGAAGATTCTGTAAATTT 769654 Query 7933 TCTTCCGATAAGACGCTTTGCATCAAAAACTGTGTTTTTGGGGTTCATGGCTGTTTGGTT 7992 ||||| || | | |||||||| || ||||| |||| || || | || ||| || Sbjct 769655 CCTTCCTATTAATCTTTTTGCATCGAAGACTGTATTTTCTGGATTTCTTGCAACTTGATT 769714 Query 7993 CTTCGCCGCGTCCCCGATAAGACGTTCATTATTTTCCGTAAACGCGACGTACGATGGGGT 8052 || || || || || || | | ||| || || || || || || || |||||||| Sbjct 769715 TTTAGCTGCATCACCAATTAATCTTTCTGTA---TCAGTGAAAGCAACATAGGATGGGGT 769771 Query 8053 CGTTCGATTCCCTTGGTCGTTCGCAATAATTTCTACGCGGTCGTTTTGCCAGACGCCGAC 8112 |||| || ||||| ||||| ||||| || || || || ||| ||| || || || Sbjct 769772 TGTTCTGTTACCTTGATCGTTAGCAATTATATCAACATTTTCATTTCTCCATACACCAAC 769831 Query 8113 GCACGAATACGTTGTTCCTAAATCAATACCGATTGC 8148 || || || || || |||||||| ||||| || || Sbjct 769832 ACAGGAGTAAGTGGTACCTAAATCGATACCTATAGC 769867 >seq8 Length=1360204 Score = 235 bits (260), Expect = 7e-57 Identities = 833/1281 (65%), Gaps = 44/1281 (3%) Strand=Plus/Minus Query 6553 CTTTTTCGCGTAC-TTTTCATCTTCATCTTTATACTTTTCCGCATCTTGGACCATCTTTT 6611 ||||||| | || |||| ||||||||| | | ||||| ||||| | | ||| |||| Sbjct 745597 CTTTTTCTCTTAAATTTTTATCTTCATCAGCAAATTTTTCAGCATCGTTAATCATTTTTT 745538 Query 6612 CAATGTCTTCTTTCGATAATCTCCCCTTATCATTCGTAATCGTAAT--CTTTTCGGATTT 6669 | || | |||||| |||||||| || || ||||| ||||| || || |||| | ||| Sbjct 745537 CTATTTGTTCTTTTGATAATCTACCTTTGTCATTAGTAATAGTTATACCTTTACT--TTT 745480 Query 6670 ACCCGAGGCCTTATCTTCAGCACTTACATTCAAAATACCATTTGCATCAACATCGAACCT 6729 || | | |||||||| || |||| |||||||| ||| || ||| || | Sbjct 745479 TCCTGTTCCTTTATCTTCTGCTTCAACATGTAAAATACCGTTTTTGTCGACAGTAAATGT 745420 Query 6730 TACATTAATTTGTGGTGTACCCCTCGGTGCGGCTGGAATACCCGTTAAATCAAATGTACC 6789 || | |||| ||| ||| || |||| | ||||||||| | ||| |||||| | || Sbjct 745419 AACCTCGATTTTAGGTACACCTCTTTGTGCAGGTGGAATACCAGATAATTCAAATTTTCC 745360 Query 6790 AAGTAAACTGTTATCCGTCGCC--TTCTTACGTTCACCTTCATAGACTTTAATTGTCACC 6847 | |||| |||||| | | | || | ||| |||||| |||||| |||| || Sbjct 745359 TAATAAATGGTTATCTTTAGTTAATGCT--CTTTCTCCTTCAAAGACTTGAATTAAAACA 745302 Query 6848 GCAGGTTGATTATCTTGTGCCGTTGAGAAGATTTGTTCTTTCTTAGATGGAATCGTCGTA 6907 || ||||| |||||||| ||||| ||| ||||| ||| || | |||||| ||| Sbjct 745301 GCTGGTTGGTTATCTTGATAGGTTGAAAAGGTTTGTGATTTTTTTGTTGGAATAACTGTA 745242 Query 6908 TTTCTCGGAATAACCGGGGTCATAATACCACCCATAGTTTCGAGTCCAAGAGACAGAGGT 6967 ||||| ||| | | |||||||||||||| | |||||| | || | || | || Sbjct 745241 TTTCTTTTAATTAATTGAGTCATAATACCACCAACAGTTTCAATACCTAAAGTTAATGGA 745182 Query 6968 GTCACGTCCAAGAGTAACAGGTCTTGAACAGATTCGTTCCCTTCACCCGTTAAGATGGCG 7027 || || || || | || | ||||| | ||| |||| || | || | Sbjct 745181 GTAACATCTAACAATACAACATCTTGTA---ATT------CTTCTCCTAAAATAATACCA 745131 Query 7028 GCTTGGACCGTCGCCCCGTATGCGACCGCCTCATCGGGGTTAATCGTTTTATTCAGTTCT 7087 ||||| | | || || ||||| || || ||||| |||||||| | |||| ||||| Sbjct 745130 GCTTGAATAGCAGCACCATATGCTACGGCTTCATCTGGGTTAATACCTCTATTTGGTTCT 745071 Query 7088 TTACCGTTAAAATAATCCGATAACATTTGTTGAATTTTCGGGATTCGTGTCGATCCACCG 7147 ||||| || ||| | || | |||||||||||||| || || || || || || || Sbjct 745070 TTACCATTGAAAAACTCTTTAATAATTTGTTGAATTTTAGGTATACGAGTTGAACCTCCT 745011 Query 7148 ACCAAAACGATTTCATTCACTTTCGATTTATCGATCTTTGAGTC-TCGAAGTGTTTTTTC 7206 || ||||| ||||||| | ||| ||| || |||| || || || | ||||| Sbjct 745010 ACTAAAACAATTTCATCGATTTTGCTTTTTTCATATTTTGCATCATCTAA-TACTTTTTT 744952 Query 7207 GACAGGTTCCATACATTTACGGAACAAGTCCATACACAGTTCCTCAAAACGTGCAC-GGG 7265 |||||||| | | || | || || || | | ||| ||||| || | | Sbjct 744951 AACAGGTTCTAAAGTTTCTCTAAATAAATCATCATTTAATTCTTCAAATTTGGCTCTTGT 744892 Query 7266 TAATGGATGTATAGAAATCAACGCCGTC--GTATAACGAATCAATTTCAATGGTTGT-TT 7322 ||||| | | | || | | || || |||| | ||||||||||| |||| || Sbjct 744891 TAATGTTTCT-GAAAAGTTATGTCCTTCAACTATATC--TTCAATTTCAAT--TTGTGTT 744837 Query 7323 GTGCCGTCGA-AGATAACGTTCGCTTTGCGCGCTCACACGCCGTTCGTAAACGACGAAGG 7381 | | | | ||||| ||| ||||| ||| | ||| ||| ||| Sbjct 744836 GAGTGAACAACTGATAAGTTTCTTTTTGCAATTTCAACTTCTTTTCTTAATTTTTGAATA 744777 Query 7382 GCACGCGGGTTACCGGA---AATATCTTTCTTATGTTTACGTTTAAAC-TCTTCAGAGAA 7437 || | ||| | || || |||| | |||| ||| ||||||| | || | | || Sbjct 744776 GCTC---TTTTATCTGATCTAAGATCTATATTATTTTTTTTTTTAAACATTTTTATAAAA 744720 Query 7438 GTGTCGAAGGAGTCTCGAATCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGC 7497 ||| | | ||| ||| ||||||||||| || ||||| |||| || || || || Sbjct 744719 TAGTC-CATAACTCTTTGATCAAAATCTTCACCTCCTAAGTGAGTATTACCTGCTGTTGC 744661 Query 7498 TTTGACTTCAAAGATACCTCCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACC 7557 | ||||||||| | ||| ||||| ||| | ||||||||||| |||||||| || Sbjct 744660 ATAGACTTCAAATACACCATTATCAATAACTAAAATAGAAACATCAAAAGTACCACCTCC 744601 Query 7558 CAGGTCAAAAATGAGTACGTTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGAT 7617 | || | | | | | || |||| || ||||| | ||| || || | Sbjct 744600 TAAATCGTATACTAAAATACTTGT------TTCTTCTTTTTTATCTAAACCATAAGCTAA 744547 Query 7618 AGCCGCCGCCGTTGGTTCATTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGC 7677 ||| || || || ||||||||||||||||| | || | |||||||| | | || Sbjct 744546 AGCAGCAGCGGTGGGTTCATTAATAATACGTACTATATTTAATCCAGCAATTGCACCAGC 744487 Query 7678 ATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTC 7737 |||||| || ||||||| ||| | ||| || || || || || || || || || || | Sbjct 744486 ATCTTTTGTAGCTTGTCTTTGTGCATCATTGAAATATGCAGGTACAGTAACAACAGCATT 744427 Query 7738 CGTGACTTTCTTACCGAGATACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGA 7797 | || ||||| | | | |||| || || ||||||||||| | |||||| | Sbjct 744426 TTTTACGGGTTTACCCAAAAAGGATTGAGCAATTTCTTTCATTTTTTCTAAAACCATAGC 744367 Query 7798 TGAAATCTCTTCAGCCGCAAA 7818 ||| | ||||| ||||| Sbjct 744366 ACTAATTTGTTCAGGTGCAAA 744346 >seq10 Length=1634725 Score = 187 bits (206), Expect = 3e-42 Identities = 558/846 (66%), Gaps = 20/846 (2%) Strand=Plus/Minus Query 115062 ATAATCACCGACGCGCTTTTCAAAAAAGTTTGTTTTGCCGTCGAGTGATATATTCTCCAT 115121 |||||| | || | ||||||||| || |||||||| || | | ||||| ||||| Sbjct 1455775 ATAATCTGCAACTCTCTTTTCAAAGAAATTTGTTTTTCCTTGTAAAGATATTAAGTCCAT 1455716 Query 115122 AAAATCAAAGGGATTTTTCGTGTTCCAGATTTTATTGTGACCCACTTGTTTTGATAATCG 115181 || ||| |||||||| | | | | ||| | ||| | || | ||||||| Sbjct 1455715 CCAACTAAATGGATTTTTTGAATGGAAAACTTTGGAGCAACCTAAACATTCTAATAATCG 1455656 Query 115182 ATCCGCAACATATTCGATATACTCCGACATTTTACCGGAATTCATACCTATGAGACTACA 115241 ||| |||||| |||| || || | ||||| | |||||||| || || | | ||| Sbjct 1455655 ATCAGCAACAAATTCAATGTATTGAGACATAAGTCTTGAATTCATTCCAATTAAATCACA 1455596 Query 115242 CGGAAGTGCGTCCGTAATGAATTCTTTTTCGATTGAAACGGCGTCTCTTATAATTTCTTC 115301 || | | || ||| ||| | |||| | | ||| || ||| | | || | || Sbjct 1455595 AGGTAAAGATTCACAAATAAATGATCTTTCTACTTCAACTGCTTCTTTAACTATATTTTG 1455536 Query 115302 AATTGTATTTTGAGATGGTTTGTTTTTTAACATGTTGAATAATTCAACCGC-AAATTCTT 115360 || | || | | ||| |||| |||| | | | |||| ||| ||| ||| Sbjct 1455535 AACAACCTCTTCTGGTAATTTATTTTCCAACAAGCTATA-AATTAAACAATTAAAATCTG 1455477 Query 115361 GGTGCATACCTTCATCTCGACTTATGAGTTCATTACTAAAACATAAACC-TGGAAGTAAC 115419 ||| | |||||||||| ||| || | |||||||||||| |||||| || || | | Sbjct 1455476 TGTGTAATCCTTCATCTCTACTAATCAATTCATTACTAAATGTTAAACCATGTAATTTAT 1455417 Query 115420 CCTCTCTTTTTTAACCAAAAAATAGCACAAAAACTACCCGAGAAGAATATACCTTCAACA 115479 | | ||||| |||||||| || ||||||||||| || || ||||| ||||| ||| Sbjct 1455416 TTTGT-TTTTTAAACCAAAATATTGCACAAAAACTTCCACTAAATAATATTCCTTCGACA 1455358 Query 115480 CACGCAAAGGCTAATAAACGTTCAGCAAATGG--TCGTTTCTTATCAAACCACTTCATAG 115537 || ||| |||| | | ||||||||| | |||| || | | | ||| || | Sbjct 1455357 CATGCATTAGCTACAATTCTTTCAGCAAAAGAGTTCGTATCATTT--ATCCATTTAGCTG 1455300 Query 115538 CCCATTTCGCCTTTCTTTCGATACACGGAATTGTTTGAATTGCTTCGAATAATTGTT--- 115594 ||||| || || ||| || || || ||| ||| || | ||||| | | Sbjct 1455299 CCCATAATGCTTTATTTTTTATTGCTGGTATATTTTCAATAGCATGAAATAAATTTAATC 1455240 Query 115595 TCT-TTTCGCTAGAATTTTTTATATACTTGTCTATGAGTTTACTGTACGTTTCACCGTGT 115653 ||| |||| | || | ||||| || || || | | ||| || |||||| |||| Sbjct 1455239 TCTCTTTCTC----ATCCCTAATATAATTATCAATTAATAAACTATAGGTTTCAGAGTGT 1455184 Query 115654 ACCATTTCATTGTGAGATTGATAGGCATAAAATGATCGAGCCTCCGTAAGTTGTATTTCA 115713 | ||||| |||| | |||||||| | || || | | ||||| ||| Sbjct 1455183 ATATTTTCAACAGCTATTTGAAAAGCATAAAACTTTTTGGCTTCAATTATTTGTACTTC- 1455125 Query 115714 TCTGCAAAATT-ATTATTTATATTTTCAAAAACTATACCATCAGAACCAGCaaaaaaaGC 115772 ||| |||||| | || || |||||| || ||||| |||||| | | |||||||| || Sbjct 1455124 TCTTAAAAATTTACTAGCTAAATTTTCTAATACTATTCCATCACTAGCTGCAAAAAATGC 1455065 Query 115773 TAAAATATATTTTATAAAATGTTTTTCATTATCACTTAATTCATTCCAA-TCATCCATAT 115831 || | || ||||||||||||||||||||| || |||||| ||| || || | || || Sbjct 1455064 TAGCACATGTTTTATAAAATGTTTTTCATTTACATTTAATT-TTTCAAAGTCTTTCAAAT 1455006 Query 115832 CTTTGGAAAAGTCTATCTCTTCAGCGGTCCAATTTGACATTTGGGCCTTTTTATACAAAG 115891 | | || || ||||| |||||||| |||||| ||| | || |||||||| ||| Sbjct 1455005 CACTTGATAAATCTATTTCTTCAGCAGTCCAAAATGAGGCCTCAGCTTTTTTATAAAAAT 1454946 Query 115892 TCCATA 115897 |||||| Sbjct 1454945 TCCATA 1454940 >seq6 Length=916956 Score = 154 bits (170), Expect = 2e-32 Identities = 968/1541 (63%), Gaps = 43/1541 (3%) Strand=Plus/Minus Query 104470 TGGTCTATATACACACCTCTATCCGCCGCCATATCGATGATTGTTTTTTGACTCATTTCC 104529 ||||| || | | ||| | ||| || |||||||| || || ||||||| | |||||| Sbjct 509418 TGGTCAATGAAAATACCACGATCAGCAGCCATATCAATAATATTTTTTTGTTTGATTTCC 509359 Query 104530 CATACGGTTTTATACAATTCCTTAAGATCATCGGGTATATCAATAATGTTTTGAACAGAC 104589 || |||||||||||||| || || | ||| ||||| || |||| | ||||||| Sbjct 509358 CAAACGGTTTTATACAACTCTTTCAAGTCACTAGGTATTTCGCTAATATATTGAACACTT 509299 Query 104590 CCATTTGCCTTCACCATAA---GATCTTTCATTTCCTTCGACCAGAGTCCACGTTCTTTC 104646 ||||| | | || | | | |||||| || | ||| || || ||| || Sbjct 509298 CCATTA---TGGGCAATTAATTGTTGTTTCATATCTTCATCCCAAAGACC----TCTATC 509246 Query 104647 AAA----TCGTTTACTAAATGTTTGTTTACGACGACAAATTCACCCGCGAGTGTTCGTCT 104702 ||| || |||| ||||| || || || | |||||||| | ||||| Sbjct 509245 AAAAAGATCTTTTAACAAATGAGGATTAACAACAAAGAATTCACCACTTAAAACACGTCT 509186 Query 104703 CAAATAGATATTGGTCGTATACGGTTCGAAACACTCGTTGTTCCCTAAAATCTGGGATGT 104762 |||| || || | ||||| ||||| || | || || || |||||||| || || || Sbjct 509185 GTAATAAATGTTACTTGTATATGGTTCAAAGGATTCATTATTTCCTAAAATTTGTGACGT 509126 Query 104763 GGATGCGGTAGGCATAGGTGCAAGAAGAAGACTATTCATAGTTCC----TTTCTTAACAA 104818 || || || ||||||||||| | ||||||| ||| | ||| || |||| Sbjct 509125 TGAAGCTGTTGGCATAGGTGCTAAAAGAAGAGAATTTCTTAATCCGTGTTTACTTATTTT 509066 Query 104819 GTTTACGCATGGCATTCCAATCG---TATCGACCACTAAACTTTGGGTCTCGATCCCACA 104875 ||| || || |||||| ||| | | | ||||| | || ||||| Sbjct 509065 TTTTTTTAATAA-ATCCCAATCCCAATATTTATTA-TCTACTTTTGC-----ATTCCACA 509013 Query 104876 TATCGAATTGAAGAATACCTTTACTAAACGGTGACCCCTTAAACGTTTCATAAGGACCGT 104935 |||| ||||| | || |||| || || || | | | | |||||| || || Sbjct 509012 TATCAAATTGTAATATTCCTTGGCTTGCTGGACTACCTTGATATGATTCATATGGTCCAC 508953 Query 104936 ACATTTCGGCAAGTTCACACGACGATTCGAGTGATGCGTGGTAGATAGTTTCGAATATAT 104995 | || || | |||| ||| ||| | | || | || |||||||| ||||| Sbjct 508952 TTACTTGTGCCAATTCAACAGACATTTCTAAAGCAGCATAATACATAGTTTCAAATATTC 508893 Query 104996 CAATGTTGAGTTTTCTCGATTCTTCTGAACCGAATGTCATTCTTAACATGATAAACACGT 105055 | || | || | | | |||||| || | ||| |||||| | ||||| | Sbjct 508892 TTCTATTTAATTCTTTAGCTTCTTCAGATTCATATGGATATCTTAAAAGCATAAATGTAT 508833 Query 105056 CAGCGAGACCCTGAACACCAATACCGATGGGTCTGTGACGCATATTTGAACGTTTCCCGT 105115 | || | || || || || || || || ||||| || | ||||||| | || | | | Sbjct 508832 CTGCTAATCCTTGTACTCCTATTCCAATAGGTCTATGTCTTTTATTTGATCTTTCCGCTT 508773 Query 105116 TTTCGGTTGGGTAAAAGTTTTTATCAATAACCTTGTTTAAGTTACGTGTAACCATTTTCG 105175 || ||| ||| | ||| | ||||||| || | ||| || | |||| ||||| | Sbjct 508772 CTTTAACTGGATAATAATTTCTTTCAATAATTTTATCTAAATTTCTAGTAATAATTTTAG 508713 Query 105176 TAACACGATGTAACTCTTCATGGTTAAACTCGTTCTTCTCGACATCAACGTATTTTGGTA 105235 ||| | || ||| | || | ||||| || || || || |||||| |||| || Sbjct 508712 TAATATCATATAATTTTTTAAAATTAAATTCTTTTTTTTCTCTATCAACAAATTTGCATA 508653 Query 105236 ACGCGATTGATGCGAGATTACATACGGCGGTTTCTTCC--TTATCCGTAAACTCCAGAAT 105293 | || || || || | |||||| || || ||| || | || ||| | || | ||| Sbjct 508652 ATGCAATGGAAGCTAAATTACAAACAGCTACTTCATCAGGTGAT--GTATATTCAATAAT 508595 Query 105294 TTCTGTACACAAATTTGATGATTTAATCGTACCAACGTGTTTATGGTTCGACTTTTCATT 105353 ||| ||| ||||| ||||||| || || | | ||| || ||||| || ||| Sbjct 508594 TTCACAACATAAATTACTGCATTTAATTGTTCCTAAATTTTTTTGATTCGATTTAGAATT 508535 Query 105354 ACACGCGTCTTTGTAAAGCATATATGGGGTTCCCGTTTCACTTTGGGATT-TAATAATTG 105412 ||| || ||||| || | ||||||||| || ||||| ||||| || ||||| | | Sbjct 508534 ACATGCATCTTTATATAACATATATGGTACACCAGTTTCTATTTGGCTTTGTAATA-TAG 508476 Query 105413 CTTTCCAAATCTCCGAAGCTGGTACAACTTTAGTTGCGATACCTTCAGATTCGTATTTCT 105472 | ||| | || || | | ||| || | | | ||| ||||||||| Sbjct 508475 CAAACCATAAATCTTGTGCAAGAATTGTTTTTTTTCCAAGATTTTCTTCTTCGTATTTTG 508416 Query 105473 CGTAAAGATCTTCAAACTCTTTACCGTACACGTCTGAAAGACCCTTTGCC--TGATCAGG 105530 || | | |||||| |||| ||| || || | | | | | | | | | ||| Sbjct 508415 TATATAATTTTTCAAATTCTTCACCC--CAGGTTTCACTTAAGCCTGGACATTCGTTAGG 508358 Query 105531 ACAAAACAATGACCAATTACCATCGGATTCAACGCGTTTCATGAACAAATCTGGAATCCA 105590 || | || | ||| || || | || | |||||| || ||||| || | ||| Sbjct 508357 GCACATTAAAGTCCAGTTCTTATTTTCCTTTACTCTTTTCATAAATAAATCAGGTACCCA 508298 Query 105591 CATGGCTGAAAAGAGGTCTCGACACCTCGCCTCTTCATCACCTTGATTCAAACGAATTTC 105650 || || |||| | || ||| ||| ||||| | ||| ||||| | | || Sbjct 508297 AATAGCATAAAATAAATCACGAGCTCTCAATTCTTCTTTACCATGATTTTTTCTTAAATC 508238 Query 105651 GAGAAAATCGAGAATATCGGCGTGCCATGGTTCTAAATAGACTGCAATAGACCCTTTAC- 105709 | ||| || | |||||| | ||||||||||| | ||| || |||| ||| ||||| | Sbjct 508237 TAAAAATTCAAAAATATCTGAATGCCATGGTTCAACATATACAGCAAAAGAACCTTTTCT 508178 Query 105710 --GACGCCCCGCTTGATTGACATATCTTGCGGTTGAGTTATACACTCGTAACATTGGAAT 105767 | || |||||| ||||||||||| || ||| | |||| |||||| || | Sbjct 508177 TTTTCCTCCACCTTGATCTACATATCTTGCTGTATCATTAAAAACTCTTAACATCGGGAC 508118 Query 105768 AATACCATCGGATGTTCCATTTGTTCCACGAATATGTGATTTATTTGCACGTACATCGTG 105827 | ||||| ||| | ||||| ||||| | || | || || | || | | ||| || Sbjct 508117 TAAACCATTTGATATACCATTAGTTCCTCTGATGTAAGAATTTTGAGCTCTAATATCTTG 508058 Query 105828 AACGTGTAACCCAATACCCCCAGCCCACTTACTGATACGCGCACACTCTTTTACTGTATC 105887 || | || ||||| || || ||||| || ||||| | |||| ||| || Sbjct 508057 TACAGCCACACCTATACCTCCTGCTGTTTTACTAATCAATGCACATTGCTTTAATGTTTC 507998 Query 105888 GTAAATACCGTCGATACTATCTTCCTT-ATTCGCAATCAGGAAACACGATGACATTTGTG 105946 | ||||| || || ||| || ||| ||| | || || || |||||||| | Sbjct 507997 AAATATACCTTCTATTGAATCAGATTTCATTGATAAT-AAAAAGCATGAAGACATTTGGG 507939 Query 105947 GTCTGGGTGTACCAGCATTGAACAGAGTTGGTGTTGCATGA 105987 |||| ||||| || | ||| || | || || || |||||| Sbjct 507938 GTCTTGGTGTTCCCGAATTAAATAATGTAGGAGTAGCATGA 507898 >seq9 Length=1345096 Score = 102 bits (112), Expect = 1e-16 Identities = 197/285 (69%), Gaps = 13/285 (5%) Strand=Plus/Plus Query 11444 TTTTCTTACCAATCGCATCAATTTCATCTATAAAGATAATACACGGTTGATTTTCACGTG 11503 ||||| | |||| |||||||||||||||||||| |||||| | ||| || || | || Sbjct 544312 TTTTCGT-CCAACAGCATCAATTTCATCTATAAAAATAATAGATGGTGCATGTTTTCTTG 544370 Query 11504 CCAATTCAAATATATCACGGACTCTTTTTGCGCCTACGCCTACAAACATTTCAACGAACG 11563 | | |||||| || | |||||| || || | || ||||| | ||||| || Sbjct 544371 CTTGTGCAAATAGTTCTCTAACTCTTGATGGTCCGATTCCCACAAATACTTCAATAAA-- 544428 Query 11564 ATGACCCCGAACACTGA-----ATAAAAGGAACGGAAGATTCACCCGCTATAGCACGTGC 11618 || || | |||||| | ||||||||| || |||||| || | ||| ||| Sbjct 544429 ATCACTTC---CACTGATATTAAAAAAAGGAACATTAGCTTCACCAGCAACAGCTTTTGC 544485 Query 11619 TAAAAGTGTTTTACCTGTACCTGGTTTACCTGTTAATAATGCACCCCTTGGTATTTTAGC 11678 ||| | ||||| || || || ||| ||| |||||||||||| |||||||||| || Sbjct 544486 TAATAAAGTTTTTCCGGTTCCCGGTGCACCACATAATAATGCACCTTTTGGTATTTTTGC 544545 Query 11679 ACC-GGTACCAAAGTACTTTTCTGGCGCCTTGAGAAAATCAACAA 11722 ||| ||| | || ||| |||| || | ||||||||||| Sbjct 544546 ACCTAATACTTGA-TATTTTGCTGGATTTTTCAAAAAATCAACAA 544589 Score = 91.5 bits (100), Expect = 2e-13 Identities = 185/271 (68%), Gaps = 8/271 (3%) Strand=Plus/Minus Query 7456 ATCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACC 7515 ||| |||||||| || || || |||| || || ||||| || ||||| | ||| Sbjct 1073760 ATCAAAATCTTCTCCTCCTAAAGAGGTATTTCCATTTGTGGCTTTTACCTCAAAAACACC 1073701 Query 7516 TCCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTAC 7575 |||| || | ||| | ||||||||||| ||||| || || | |||| ||| || Sbjct 1073700 TCCTAATATTTCTAAAATTGAAACATCAAATGTACCTCCTCCTAAGTCATAAACAGCTAT 1073641 Query 7576 GTTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTC 7635 | || | || |||| |||| | ||| | || | ||| || || |||||||| Sbjct 1073640 GACTTTACCATCA-CTTTTTTCTAA-----ACCAAAAGCTAAAGCAGCTGCAGTTGGTTC 1073587 Query 7636 ATTAATAATAC-GAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTC 7694 ||||||||| | || ||| | || || ||||| | | |||||||| || ||||| | Sbjct 1073586 ATTAATAATTCTTAAAACA-TCTAGACCTGCAATTTTACCAGCATCTTTTGTGGCTTGCC 1073528 Query 7695 GTTGCGAATCGTTAAAGTAGGCCGGGACCGT 7725 ||| ||||| ||||| || || || || || Sbjct 1073527 TTTGTGAATCATTAAAATATGCAGGTACAGT 1073497 >seq13 Length=2616835 Score = 95.1 bits (104), Expect = 2e-14 Identities = 170/247 (69%), Gaps = 6/247 (2%) Strand=Plus/Plus Query 11438 TACTTCTTTTCTTACCAATCGCATCAATTTCATCTATAAAGATAATACACGGT---TGAT 11494 |||||||||| ||| | ||||| |||||||| ||||| | |||||| ||| || | Sbjct 1248402 TACTTCTTTTAGAACCTACTGCATCTATTTCATCAATAAAAACAATACAAGGTGCATGCT 1248461 Query 11495 TTTCACGTGCCAATTCAAATATATCACGGACTCTTTTTGCGCCTACGCCTACAAACATTT 11554 ||| ||| || ||| | || | | |||| |||| ||||| || |||||||||| Sbjct 1248462 TTTT---TGCAGTTTGAAAAAGCTCTCTTATTCTTCTTGCACCTACACCAACAAACATTT 1248518 Query 11555 CAACGAACGATGACCCCGAACACTGAATAAAAGGAACGGAAGATTCACCCGCTATAGCAC 11614 | | || ||| || || || ||||| || || | ||| || || ||||| | Sbjct 1248519 CTTCAAATTCTGAACCAGATGCTTGGATAAAGGGTACATTTGCTTCCCCTGCAATAGCCC 1248578 Query 11615 GTGCTAAAAGTGTTTTACCTGTACCTGGTTTACCTGTTAATAATGCACCCCTTGGTATTT 11674 || | | |||||| ||||| || |||| ||||| ||||||| ||| | || | || Sbjct 1248579 TAGCAATTAATGTTTTTCCTGTTCCAGGTTCACCTGATAATAATATACCTTTGGGCAATT 1248638 Query 11675 TAGCACC 11681 | ||||| Sbjct 1248639 TTGCACC 1248645 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 635132490372760