Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmodium_20chabaudi_20chabaudi_20[refseq_20GCF_5F900002335.2_20201 4-08-27] 39 sequences; 18,867,781 total letters Query= NC_016072.1 Length=1259197 Score E Sequences producing significant alignments: (Bits) Value seq7 338 5e-87 seq8 262 3e-64 seq6 192 5e-43 seq10 170 2e-36 seq14 152 4e-31 seq13 149 5e-30 seq12 143 2e-28 seq9 134 1e-25 seq11 132 4e-25 seq3 116 3e-20 >seq7 Length=1169068 Score = 338 bits (374), Expect = 5e-87 Identities = 573/822 (70%), Gaps = 21/822 (3%) Strand=Plus/Minus Query 551790 GGAGATTCTCATCTTGGTGGCGAAGATTTTGATAATAGACTGGTATCATGGTGTGTTGAA 551849 |||||| | ||| | ||||| |||||||||||||| | | ||| | || |||||| Sbjct 769210 GGAGATACCCATTTAGGTGGTGAAGATTTTGATAACCGTTTAGTAAACTTTTGCGTTGAA 769151 Query 551850 GATTTTAAACGAAAAAACAAAGTT---GATCTATCTACATCTGCCAAAGCTCTTCGTCGT 551906 ||||||||| ||||||| | || ||| |||| | | | | |||| | | | Sbjct 769150 GATTTTAAAAGAAAAAATAGAGGCAAAGATTTATCAAAAAATAGTAGAGCTTTAAGAAGA 769091 Query 551907 CTAAGAACTGCTTGCGAAAGAGCCAAACGAGCTCTTTCATCTGGTACTCAAACCACTATT 551966 ||||||| || |||||||| ||||| | | || ||| |||||| | || ||| Sbjct 769090 TTAAGAACACAATGTGAAAGAGCAAAACGTACCTTATCTTCTTCAACTCAAGCAACAATT 769031 Query 551967 GAAGTAGATTCATTATTTGAGGGAATTGATTATAATACGCCTATTTCGAGGGCCAAATTT 552026 ||| | ||||| | ||||| || |||||||||| | | || || || | |||| Sbjct 769030 GAAATTGATTCTCTTTTTGAAGGTATTGATTATAGTGTAACAGTTAGTAGAGCTAGATTT 768971 Query 552027 GAAGATATTTGTTCTGATCTCTTTAGAAAAACAATTGAACCAGTAGAACAAGTTTTAAGA 552086 ||||| | ||| ||| |||||| | ||| | ||| || ||| ||||||||| | Sbjct 768970 GAAGAATTATGTATTGACTATTTTAGAGATACATTAATACCTGTTGAAAAAGTTTTAAAA 768911 Query 552087 GATTCAAAGATTGATAAATCCAAAGTACATGAAATTGTGCTTGTTGGTGGATCTACAAGA 552146 ||| | | ||| || ||| | || |||||| |||| | |||||||||||||||||| Sbjct 768910 GATGCCATGATGGACAAAAAGAGTGTTCATGAAGTTGTCTTAGTTGGTGGATCTACAAGA 768851 Query 552147 ATTCCTAAAATTCGCGAAATGTTAAGTTCTTATTTC---AATGGTAAAAAATTAAATGAA 552203 ||||| ||||||| ||| |||| | ||| ||||||||| || | || | Sbjct 768850 ATTCCAAAAATTC---AAACATTAATAAAAGAATTCTTTAATGGTAAAGAAGCA--TGCA 768796 Query 552204 AGTG--TTAATCCAGATGAGGCTGTTGCCTATGGTGCCGCAATTCAAGCAGCTATTCTTT 552261 | | ||||| ||||| |||||||| |||||||| || | ||||| || ||| | | Sbjct 768795 GATCAATCAATCCTGATGAAGCTGTTGCTTATGGTGCTGCTGTCCAAGCCGCCATTTTAT 768736 Query 552262 CTGGA---CAAACTGATGAAAAACTACAAAATATTGTACTTGTAGATGT-TACTCCTCTA 552317 | || ||| | ||| | ||||| || | || | ||||||| | |||| || Sbjct 768735 CAGGTGATCAATCCAATGCAG---TACAAGATTTATTATTATTAGATGTCTGTTCCT-TA 768680 Query 552318 TCTCTTGGTTTAGAAACAGTTGGAGGTATTATGACTAATCTTATCGATAGAAATACTACT 552377 ||| | || |||||||| | |||||| ||||||| || | || || |||||||| || Sbjct 768679 TCTTTAGGATTAGAAACTGCAGGAGGTGTTATGACAAAATTAATTGAAAGAAATACAACA 768620 Query 552378 ATTCCTTGTAAAAAATCTCGTGTATTTTCTACGTATTCAGATAATCAAACTGCTGTTACA 552437 ||||| |||||| || | ||| | || ||| | ||||||||| | | ||| | Sbjct 768619 ATTCCAGCCAAAAAAAGTCAAATTTTTACCACCTATGCTGATAATCAACCAGGTGTGTTA 768560 Query 552438 ATTCAAATTTTTGAAGGAGAAAGAAAATTCACTAAAGATAATAATCAACTTGGTACTTTT 552497 || ||| | | ||||||||||||| || || ||||||||||| | | |||| ||| Sbjct 768559 ATACAAGTATATGAAGGAGAAAGAGCCTTAACCAAAGATAATAACTTATTAGGTAAATTT 768500 Query 552498 AATTTAGAAGGTATTCCTCCTGCTCCTCGTGGAGTACCGCAAATTGAAGTTACTTTCGAT 552557 ||||||| |||||||| ||||||||| | || || |||||||||||||| || ||| Sbjct 768499 CATTTAGATGGTATTCCACCTGCTCCTAGAAAGGTTCCACAAATTGAAGTTACCTTTGAT 768440 Query 552558 ATCGATGCCAATGGAATTTTGAATGTGACTGCTTGTGATAAA 552599 || ||||| ||||| || || ||||| || ||| ||| ||| Sbjct 768439 ATTGATGCAAATGGTATCTTAAATGTCACAGCTGTTGAAAAA 768398 Score = 286 bits (316), Expect = 3e-71 Identities = 401/555 (72%), Gaps = 12/555 (2%) Strand=Plus/Minus Query 549979 GTCAAACAAAGTAGCTATAGGTATAGATTTAGGAACCACATATAGTTGTGTTGGTGTTTG 550038 |||||||| | ||||||||||| |||||||| ||||| || ||||||||||| || Sbjct 769877 GTCAAACA---TCGCTATAGGTATCGATTTAGGTACCACTTACTCCTGTGTTGGTGTATG 769821 Query 550039 GCAAAATGGTAAAGTTGAAATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTA 550098 | ||||| || ||||| || ||||| || ||||||||||||||||| || ||||| || Sbjct 769820 GAGAAATGAAAATGTTGATATAATTGCTAACGATCAAGGTAACAGAACAACCCCATCCTA 769761 Query 550099 TGTTTCTTTCACGGAAACTGAACATTTAGTTGGTGATGCAGCAAAATATCAAGCCACTGG 550158 |||| ||||||| || || ||| ||| ||||||||||||| ||| |||||| | | Sbjct 769760 TGTTGCTTTCACTGATACAGAAAGATTAATTGGTGATGCAGCTAAAAATCAAGTTGCAAG 769701 Query 550159 TAATCCTACCAATACTATTTTTGATGCTAAACGTTTAATTGGAAGAAGTTTTAATGATTC 550218 ||||| ||||| | || ||||| ||| | ||||| ||||| | |||| || || Sbjct 769700 AAATCCAGAAAATACAGTCTTCGATGCAAAAAGATTAATAGGAAGGAAATTTACAGAATC 769641 Query 550219 GACTGTTCAGGCAGATATGAAGCATTGGCC-TTTCCAAATTGTTAATGT-TTCTGGAAAA 550276 | || || |||||||| || ||||| ||| || | | || || ||||| Sbjct 769640 TTCAGTACAAAGTGATATGAAACACTGGCCATTTACAGTCAAATCAGGTATTGAAGAAAA 769581 Query 550277 CCTTAT-ATTGAAGCTACTCATGAAGGATCTGTTAAACAAT--TTTCA-CCAGAACAAAT 550332 | ||| ||||||| | | || |||| || ||| ||| ||||| || ||| |||| Sbjct 769580 ACCTATGATTGAAGTTGTTTATCAAGG---TGAGAAAAAATTATTTCACCCTGAAGAAAT 769524 Query 550333 TTCATCTATGGTTTTAATGAAAATGAAACAAACAGCCAGTGCTTTTGTTGGTCAAGAAGT 550392 ||| |||||||||||| ||||||||| ||| || || ||| | || || | Sbjct 769523 TTCTTCTATGGTTTTACAAAAAATGAAAGAAAATGCAGAAGCCTTTTTAGGAAAATCTAT 769464 Query 550393 TACGGATGCAGTAATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAA 550452 | |||| || || || ||||| ||||||||||| || || ||| | ||||| || || Sbjct 769463 AAAAAATGCCGTCATCACAGTACCTGCATATTTTAACGATTCTCAAAGGCAAGCAACAAA 769404 Query 550453 AGATGCTGGACGTATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGC 550512 ||||||||| ||||| ||| | |||||| | | ||||| |||||||| ||||| || Sbjct 769403 AGATGCTGGTACAATTGCAGGATTAAATGTTATGAGAATTATAAATGAACCAACTGCAGC 769344 Query 550513 TGCACTTGCATATGG 550527 || |||||||||| Sbjct 769343 AGCTATTGCATATGG 769329 Score = 87.8 bits (96), Expect = 1e-11 Identities = 202/297 (68%), Gaps = 17/297 (6%) Strand=Plus/Plus Query 361546 ATCTATATCTTCACCACCTAAATGTGTA-CTACCGCTAACTGCTA-ATGTTCTAAATAAG 361603 ||| | |||||||||||||||||| ||| || | ||| |||| | ||| || || Sbjct 769178 ATCAAAATCTTCACCACCTAAATGGGTATCTCCTGCTGT-TGCTTTAACTTCGAA-TATA 769235 Query 361604 CCATTATTAATATTCATGAGACAAACATCGAGTGTTCCTGCACCTAAATCATATATGATA 361663 |||| | |||| | | | ||||||| | || || | |||||||| | || | | Sbjct 769236 CCATCTTCAATAGTAAGTAATGAAACATCAAAAGTACCACCTCCTAAATCGAAAATTAAA 769295 Query 361664 ATATTCCCCCCGTTTTTAT--TTTTCCAAGTTTTACTTCCAAGACCATAAGCTAATGAAG 361721 ||||| ||||| | |||||| |||| | || |||||| || | | | Sbjct 769296 ATATT-------TTTTTCTCCTTTTCC---TTTTTTGTGTAA-ACCATATGCAATAGCTG 769344 Query 361722 CAGCTGTTGGTTCGTTAATTATTTTAATAACATTGAGTCCCGCTATTTTTGATGCATCTA 361781 | || |||||||| || || ||| | |||||||| | ||| || ||| | |||||| Sbjct 769345 CTGCAGTTGGTTCATTTATAATTCTCATAACATTTAATCCTGCAATTGTACCAGCATCTT 769404 Query 361782 AAGTGGCTTGACGTTGTGCATCATTAAAATATGCAGGAACAGTAATCACTGCTTTTT 361838 || ||||| | ||| | ||| |||||||||||||| || || || || || |||| Sbjct 769405 TTGTTGCTTGCCTTTGAGAATCGTTAAAATATGCAGGTACTGTGATGACGGCATTTT 769461 >seq8 Length=1360204 Score = 262 bits (290), Expect = 3e-64 Identities = 383/540 (71%), Gaps = 11/540 (2%) Strand=Plus/Plus Query 552015 AGGGCCAAATTTGAAGATATTTGTTCTGATCTCTTTAGAAAAACAATTGAACCAGTAGAA 552074 || |||||||||||||| | | |||| | |||||| |||| | ||||| || || Sbjct 744895 AGAGCCAAATTTGAAGAATTAAATGATGATTTATTTAGAGAAACTTTAGAACCTGTTAAA 744954 Query 552075 CAAGTTTTAAGAGATTCAAAGATTGATAAATCCAAAGTACATGAAATTGTGCTTGTTGGT 552134 |||| ||| ||| |||| ||| ||| |||| | |||||||||| | || || Sbjct 744955 AAAGTATTAGATGATGCAAAATATGAAAAAAGCAAAATCGATGAAATTGTTTTAGTAGGA 745014 Query 552135 GGATCTACAAGAATTCCTAAAATTCGCGAAATG-TTAAGTTCTTATTTCAATGGTAAAAA 552193 || || || | || |||||||||| |||| |||| || ||||||||||||| | Sbjct 745015 GGTTCAACTCGTATACCTAAAATTCAACAAATTATTAAAGAGTT-TTTCAATGGTAAAGA 745073 Query 552194 ATTAAATGAAAGTGTTAATCCAGATGAGGCTGTTGCCTATGGTGCCGCAATTCAAGCAGC 552253 | |||| | || |||| |||||||| || || || |||||||| || |||||||| | Sbjct 745074 ACCAAATAGAGGTATTAACCCAGATGAAGCCGTAGCATATGGTGCTGCTATTCAAGCTGG 745133 Query 552254 TATTCTTTCTGGACAAACTGATGAAAAACTACAAAATATTGTACTTGTAGATGTTACTCC 552313 |||| ||| ||| ||| || ||||| || ||||| | ||||||||||||| Sbjct 745134 TATTATTTTAGGA---------GAAGAATTACAAGATGTTGTATTGTTAGATGTTACTCC 745184 Query 552314 TCTATCTCTTGGTTTAGAAACAGTTGGAGGTATTATGACTAATCTTATCGATAGAAATAC 552373 || || | ||| | ||||| ||||| |||||||||||| | | || | |||||||| Sbjct 745185 ATTAACTTTAGGTATTGAAACTGTTGGTGGTATTATGACTCAATTAATTAAAAGAAATAC 745244 Query 552374 TACTATTCCTTGTAAAAAATCTCGTGTATTTTCTACGTATTCAGATAATCAAACTGCTGT 552433 |||||| |||||||| | ||||| || ||| |||||| ||| | ||||| Sbjct 745245 AGTTATTCCAACAAAAAAATCACAAACCTTTTCAACCTATCAAGATAACCAACCAGCTGT 745304 Query 552434 TACAATTCAAATTTTTGAAGGAGAAAGAAAATTCACTAAAGATAATAATCAACTTGGTAC 552493 | ||||||| | ||||||||||||||| ||| ||||||||||| || | | || | Sbjct 745305 TTTAATTCAAGTCTTTGAAGGAGAAAGAGCATTAACTAAAGATAACCATTTATTAGGAAA 745364 Query 552494 TTTTAATTTAGAAGGTATTCCTCCTGCTCCTCGTGGAGTACCGCAAATTGAAGTTACTTT 552553 ||| | ||| |||||||| ||||| | | || ||||| |||| || ||||| || Sbjct 745365 ATTTGAATTATCTGGTATTCCACCTGCACAAAGAGGTGTACCTAAAATCGAGGTTACATT 745424 Score = 172 bits (190), Expect = 4e-37 Identities = 371/547 (68%), Gaps = 6/547 (1%) Strand=Plus/Plus Query 549994 TATAGGTATAGATTTAGGAACCACATATAGTTGTGTTGGTGTTTGGCAAAATGGTAAAGT 550053 ||| ||||| |||||||| || || || |||||||||||||| | ||||||| | ||| Sbjct 744024 TATTGGTATCGATTTAGGTACTACTTACAGTTGTGTTGGTGTATTTAAAAATGGAAGAGT 744083 Query 550054 TGAAATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCACGGA 550113 |||||| | ||||||| ||||||| | | ||||||||| ||||| || || || Sbjct 744084 TGAAATATTAAACAATGATTTAGGTAACCGTATTACTCCATCATATGTATCATTTGTTGA 744143 Query 550114 AACTGAACATTTAGTTGGTGATGCAGCAAAATATCAAGCCACTGGTAATCCTACCAATAC 550173 ||| ||||||||| ||||| |||| |||| ||| | || || | || Sbjct 744144 TGGAGAAAGGAAAGTTGGTGAAGCAGCTAAATTAGAAGCTACTTTACACCCAACTCAAAC 744203 Query 550174 TATTTTTGATGCTAAACGTTTAATTGGAAGAAGTTTTAATGATTCGACTGTTCAGGCAGA 550233 | | ||||||| ||| | | || || || | ||| ||||| || ||| Sbjct 744204 TGTATTTGATGTTAAGAGACTTATAGGTAGGAAATTTGATGATAAAGAAGTCGTAAAAGA 744263 Query 550234 TATGAAGCAT-TGGCCTTTCCAAATTGTTAATGTTTCTGGAAAACCTTATATTGAAGCTA 550292 || ||| | | || | |||| || || | || ||||| |||| || | Sbjct 744264 TA-GAACTTTATTACCATATGAAATAGTAAACAATGAAGGTAAACCAAATATCAGAGTT- 744321 Query 550293 CTCATGAAGGATCTGTTAAACAATTTT-CACCAGAACAAATTTCATCTATGGTTTTAATG 550351 | || || || | | |||| |||| ||||||||| ||||||||||| Sbjct 744322 CAAATAAAAGACAAACCCACTACTTTTGCACCTGAACAAATTAGTGCTATGGTTTTAGAA 744381 Query 550352 AAAATGAAACAAACAGC-CAGTGCTTTTGTTGGTCAAGAAGTTACGGATGCAGTAATAAC 550410 ||||||||| ||| || || | ||||| | ||| || || | |||| || | || Sbjct 744382 AAAATGAAAGAAATTGCTCAATCCTTTT-TGGGTAAACCCGTAAAAAATGCTGTTGTTAC 744440 Query 550411 TGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGGACGTATTGC 550470 |||||| |||||||| ||||| ||||| | |||||||| ||||||||||| ||||| Sbjct 744441 TGTACCTGCATATTTCAATGATGCACAAAGACAAGCTACAAAAGATGCTGGTGCAATTGC 744500 Query 550471 TGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTGCATATGGACT 550530 |||| | ||| | | |||||||| |||||||| || |||||||| | || ||||| | Sbjct 744501 TGGATTAAATATAGTACGTATTATTAATGAACCCACCGCTGCTGCTTTAGCTTATGGTTT 744560 Query 550531 TGATAAA 550537 |||||| Sbjct 744561 AGATAAA 744567 Score = 131 bits (144), Expect = 1e-24 Identities = 140/185 (76%), Gaps = 0/185 (0%) Strand=Plus/Plus Query 390811 ATACCATTATCACCATATACACATTGAATTAATTTGTCATTGGCATTTCTTACGGTACCA 390870 || |||| |||||||||| | ||||||| | | ||| | ||||||||| || | | Sbjct 340799 ATTCCATCTTCACCATATAAAAATTGAATAATATCACCATATGAATTTCTTACTGTTCTA 340858 Query 390871 TCATACTCTACTTTAATGTCTTCTAACATTTTAACTAATTTTCTTTGGATATAACCAGTG 390930 ||||||| ||| ||| ||||| | ||||| |||| ||||||| ||||||||||| Sbjct 340859 TCATACTGTACCATAACATCTTCCATAGCTTTAATTAATCTTCTTTGTATATAACCAGTT 340918 Query 390931 TCTGCAGTTTTAATTGCAGTATTAATAATACCTTCTCTTCCTGCCATAACTTGGAAGAAA 390990 |||| |||||| ||||||| ||||||||||||||| ||| ||||| | || || || Sbjct 340919 TCTGATGTTTTACAAGCAGTATCAATAATACCTTCTCTACCTCCCATAGCATGAAAAAAG 340978 Query 390991 AATTC 390995 | ||| Sbjct 340979 ACTTC 340983 Score = 116 bits (128), Expect = 3e-20 Identities = 281/413 (68%), Gaps = 28/413 (7%) Strand=Plus/Minus Query 361431 TTTTGGCATTTTCAACAGCattttttaatttt--aattgagctaattta-ctgaactcga 361487 |||| ||| ||||||| | ||| |||||||| ||| |||| |||| |||| || | Sbjct 744814 TTTTTGCAATTTCAACTTCTTTTCTTAATTTTTGAAT--AGCTCTTTTATCTGATCTA-A 744758 Query 361488 gttttcgtattttatattttttttGAAAATCAAGTATTACATGATTCATGATTAAATAAT 361547 | | | || |||| |||||||| ||| ||| | || | ||| | | | || Sbjct 744757 GATCT---ATATTATTTTTTTTTTTAAACATTTTTATAAAATAGTCCATAACTCTTTGAT 744701 Query 361548 CTATATCTTCACCACCTAAATGTGTACTACC-GCTAACTGC-TAATGTTCTAAATAAGCC 361605 | | ||||||||| ||||| || ||| |||| ||| ||| || ||| ||||| || Sbjct 744700 CAAAATCTTCACCTCCTAAGTGAGTATTACCTGCTGT-TGCATAGACTTC-AAATACACC 744643 Query 361606 ATTATTAATATTCATGAGACAAACATCGAGTGTTCCTGCACCTAAATCATATATGATAAT 361665 ||||| |||| | | | ||||||| | || || | |||||||| |||| | ||| Sbjct 744642 ATTATCAATAACTAAAATAGAAACATCAAAAGTACCACCTCCTAAATCGTATACTAAAAT 744583 Query 361666 ATTCCCCCCGTTTTTATTTTTCCAAGTTTTACTTCCAAGACCATAAGCTAATGAAGCAGC 361725 | | | ||| || || ||||| || || |||||||||||| | |||||| Sbjct 744582 ACT-------TGTTTCTTCTT-----TTTTA--TCTAA-ACCATAAGCTAAAGCAGCAGC 744538 Query 361726 TGTTGGTTCGTTAATTATTTTAATAACATTGAGTCCCGCTATTTTTGATGCATCTAAAGT 361785 || ||||| ||||| || | | ||| | ||| || ||| |||||| || Sbjct 744537 GGTGGGTTCATTAATAATACGTACTATATTTAATCCAGCAATTGCACCAGCATCTTTTGT 744478 Query 361786 GGCTTGACGTTGTGCATCATTAAAATATGCAGGAACAGTAATCACTGCTTTTT 361838 ||||| | |||||||||||| ||||||||||| ||||||| || || |||| Sbjct 744477 AGCTTGTCTTTGTGCATCATTGAAATATGCAGGTACAGTAACAACAGCATTTT 744425 Score = 98.7 bits (108), Expect = 8e-15 Identities = 178/256 (70%), Gaps = 6/256 (2%) Strand=Plus/Plus Query 394014 TTTCATCAAATGTTAAATTCATTGCAA-TAATTTGTGGTAGTCCCACTTCATTAAGAGCA 394072 ||||| ||||||||| |||| |||| | |||| |||| || | | || | | | Sbjct 342531 TTTCACAAAATGTTAATGTCATAGCAACTGATTTA-GGTACCCCTATATAATCTATACCT 342589 Query 394073 ATATTTGGATCCGAGGTAATAACTGTACGACCTGACATATCCACACGTTTTCCCATAAGA 394132 | ||| ||||| ||||| || || | | |||| | ||| || | ||| ||||| | | Sbjct 342590 AAATTAGGATCACCAGTAATTACAGTTCTAGCTGAAAAATCAACTCTTTTACCCATTAAA 342649 Query 394133 TTTCCACGAATTCTACCTTCTTTACCTCGTAATCGTGACGACAAATCTTTTGTTAAtttt 394192 ||||| | | |||||||||||||||| ||||| || | | ||||| || |||| Sbjct 342650 TTTCCTCTTAATCTACCTTCTTTACCTTTTAATCTTGTTCTTATAGCTTTTATTGGTTTT 342709 Query 394193 tt--atttttttGCTGTGATCTTGGTAATCCTGATATATCGTTCGCAAAAAATGTTGCAA 394250 || || | ||| || | |||| | |||| |||||| || |||| ||||||| || Sbjct 342710 TTAGATCTAGTTGTTGCAA--TTGGCATACCTGGTATATCATTATCAAATAATGTTGTAA 342767 Query 394251 CATGATATTGTAATAA 394266 |||| | |||||||| Sbjct 342768 TATGAAACTGTAATAA 342783 >seq6 Length=916956 Score = 192 bits (212), Expect = 5e-43 Identities = 812/1263 (64%), Gaps = 55/1263 (4%) Strand=Plus/Minus Query 684506 ATTCCATAAATCAAATTGGAATTTTCCTTTGGAAAGAGGACTTCCTATAAATGTTTCATA 684565 |||||| | ||||||||| ||| |||||| | ||||| ||| | ||| |||||| Sbjct 509020 ATTCCACATATCAAATTGTAATATTCCTTGGCTTGCTGGACTACCTTGATATGATTCATA 508961 Query 684566 AGCACCAAATTCTTTGGATAATTTCATTGATTCTTCCAGACAACCAAAATAAATAGTTTC 684625 | ||| | ||| | |||| | || ||| | | | || |||| |||||||| Sbjct 508960 TGGTCCACTTACTTGTGCCAATTCAACAGACATTTCTAAAGCAGCATAATACATAGTTTC 508901 Query 684626 AAATATTTTACGATTGAGATCGCGAGCCAATTCAGAATCAAATGG-TGTTTTAAAAATCG 684684 ||||||| | | ||| | || ||| |||||| ||| |||| | | |||||| | Sbjct 508900 AAATATTCTTCTATTTAATTCTTTAGCTTCTTCAGATTCATATGGATATCTTAAAA---G 508844 Query 684685 CAAAAA--CATCCGCTACTCCTTGGACACCAACACCAATTGGCCTATGTTTAATATTAGA 684742 || ||| ||| |||| |||||| || || | ||||| || |||||| | |||| || Sbjct 508843 CATAAATGTATCTGCTAATCCTTGTACTCCTATTCCAATAGGTCTATGTCTTTTATTTGA 508784 Query 684743 TACACGTGTTTTATCAACTGGATAAAAATTAATATCAATAACATTATTAAGATTTCTTGT 684802 | | || | |||||||||| |||| | ||||||| |||| | |||||| || Sbjct 508783 TCTTTCCGCTTCTTTAACTGGATAATAATTTCTTTCAATAATTTTATCTAAATTTCTAGT 508724 Query 684803 CATAATTCCTGACACTTTCCGTAACATATCATAATCGAATTCTGGTACTCCATTTTTATG 684862 |||||| | | | ||| | | | ||| |||||| ||||| | Sbjct 508723 AATAATTTTAGTAATATCATATAATTTTTTAAAATTAAATTCT-------TTTTTTTCTC 508671 Query 684863 TAT-TATGAATCTG-GGAAGACATATTGATGACAAATTACAAGTGGCATATTCATCCGCT 684920 ||| | ||| || || || || || | ||||||||| || |||||| | | Sbjct 508670 TATCAACAAATTTGCATAATGCA-ATGGAAGCTAAATTACAAACAGCTACTTCATCAGGT 508612 Query 684921 GATGAGTATTCTACAATTTCCGAACAAAGATTTGATCCATTAATAACGCCAACATTAATT 684980 |||| ||||| | |||||| |||| | ||| | ||||| || | ||| || Sbjct 508611 GATGTATATTCAATAATTTCACAACATAAATTACTGCATTTAATTGTTCCTAAATTTTTT 508552 Query 684981 TGATTGGACTTATAATTAACAGCATCTTTAAAAACAATATATGGTACTCCGGTTTCAATT 685040 ||||| || ||| ||||| ||||||||| | | ||||||||||| || ||||| ||| Sbjct 508551 TGATTCGATTTAGAATTACATGCATCTTTATATAACATATATGGTACACCAGTTTCTATT 508492 Query 685041 TGTGTTTCCATAATTTTAAACCATAAATCACGAGCAGATATTTGTTTCATATATTTACCT 685100 || ||| | || |||||||||||| | ||| | | |||||| | ||| | Sbjct 508491 TGGCTTTGTAATATAGCAAACCATAAATCTTGTGCA-AGAATTGTTT----TTTTTCCAA 508437 Query 685101 GATTT-----TTCATAACTCAAATATGTTTCATTAAATTCAGTACCATATTTACCAACAA 685155 ||||| ||| || | |||| || | |||||| ||| | | || | Sbjct 508436 GATTTTCTTCTTCGTATTTTGTATATAATTTTTCAAATTCTTCACCCCAGGTTTCACTTA 508377 Query 685156 TATTTGGACATTCAGATGGACACATCAAGGACCA-TACTCCATCTTCTCGTACTCGCTCA 685214 ||||||||| || ||||| || | ||| | || || ||| ||||| | Sbjct 508376 AGCCTGGACATTCGTTAGGGCACATTAAAGTCCAGTTCT-TATTTTCCTTTACTCTTTTC 508318 Query 685215 ATAAATATATCATTNNNNNNNNNNNCTAAAAACAAATCTCTGGCTCTTTCAGT--TTCCG 685272 ||||||| |||| | |||| ||||| | |||| ||| | ||| Sbjct 508317 ATAAATAAATCAGGTACCCAAATAGCATAAAATAAATCACGAGCTC--TCAATTCTTCTT 508260 Query 685273 CTCCTGTAttttttttAAGATCGAGGAAAAAATAAATATCTGCATGCCAAGGTTCAATAT 685332 || ||||||| | | ||| | || | ||||||||| |||||| ||||||| || Sbjct 508259 TACCATGATTTTTTCTTAAATCTAAAAATTCAAAAATATCTGAATGCCATGGTTCAACAT 508200 Query 685333 AAATAGCAAATGAACCAGCTCTTTTGCCT---CCTTGATTGGCATACCTCGATATATTAT 685389 | | |||||| ||||| |||||| ||| ||||||| |||| || | | ||| || Sbjct 508199 ATACAGCAAAAGAACCTTTTCTTTTTCCTCCACCTTGATCTACATATCTTGCTGTATCAT 508140 Query 685390 TAAATACAGTTAATACTCG----TAGACCACTTGCTGTGCCTTGTGTAGAATTAATATAA 685445 |||| || |||| | ||| || |||| ||| | | || | || | || ||| Sbjct 508139 TAAAAACTCTTAACA-TCGGGACTAAACCATTTGATATACCATTAGTTCCTCTGATGTAA 508081 Query 685446 GATCCATCCGCCCTAATATTTGAAACATTTACACCAATTCCACCAGCATATTTACTAATC 685505 || | || ||||||| | ||| ||||| || || || || |||||||||| Sbjct 508080 GAATTTTGAGCTCTAATATCTTGTACAGCCACACCTATACCTCCTGCTGTTTTACTAATC 508021 Query 685506 ATAGCACAATCTTTCCAACAATCACCAATTGCTCCCAT---ATCATCTTTTATTCCTAAA 685562 | ||||| | || | ||| || || | || |||| ||| ||| ||| Sbjct 508020 AATGCACATTGCTTTAATGTTTCAAATATACCTTCTATTGAATCAGATTTCATTGATAAT 507961 Query 685563 AGGAAACAGCTTGATAATT--GTTCATGAGTAGTTCCAGCATTAAATAATGTTGGTGTTG 685620 | || || || | || | || || || ||||| | |||||||||||| || || | Sbjct 507960 AAAAAGCATGAAGACATTTGGGGTCTTG-GT-GTTCCCGAATTAAATAATGTAGGAGTAG 507903 Query 685621 CATGAGTAAAATAACCCTGTGACAACATTTCATAAGTTTCAAATATTCTGTT-TAGATCA 685679 ||||||||||||| ||||||| | | ||||||||| || | || || |||||| Sbjct 507902 CATGAGTAAAATATTTTTGTGACATTAAATGATAAGTTTCTAA-AGCCTTTTCAAGATCA 507844 Query 685680 TTATTACGATAATGTATAGCAATTGCTACACGCATAAATAAATGTTGAGGTCTTTCTATG 685739 | | || |||||| | || | ||| | ||| |||||||| ||||| | ||| || Sbjct 507843 T-----CTAT-ATGTATTCCTATAGATACTCTCATTAATAAATGCTGAGGACGTTCAATA 507790 Query 685740 ATT 685742 ||| Sbjct 507789 ATT 507787 Score = 154 bits (170), Expect = 1e-31 Identities = 152/194 (78%), Gaps = 2/194 (1%) Strand=Plus/Minus Query 563283 TTCTTTGGTAATATTGTAATCAGCTAGAGTTCTTGAATCTTCAAGTTGTTTTCCGGCAAA 563342 |||||| ||| ||||| |||| ||| ||||| |||||| | ||||||||||||||| Sbjct 466384 TTCTTTTTGAATGTTGTAGTCAGATAGTGTTCTACCATCTTCTAATTGTTTTCCGGCAAA 466325 Query 563343 AATAAGTCTTTGCTGATCAGGAGGAATTCCTTCTTTATCTTGAATTTTTTGTTTTACTGC 563402 ||| | |||||| |||||||||||||| |||||||||||||||||||| ||| || Sbjct 466324 AATTAATCTTTGTTGATCAGGAGGAATACCTTCTTTATCTTGAATTTTAGCTTTAACATT 466265 Query 563403 CTCAATTGTATCAG-TGTGAGTACATTCGAGAGTAACAGTTTTACCAGTAAGAGTTTTAA 563461 ||||| ||||||| || ||| || ||||| | ||||| || || | |||||| | Sbjct 466264 TTCAATGGTATCAGATGGCTCAACA-TCAAGAGTGATTGTTTTCCCGGTTAAAGTTTTTA 466206 Query 563462 CGAAAATTTGCATA 563475 ||||||| |||||| Sbjct 466205 CGAAAATCTGCATA 466192 Score = 150 bits (166), Expect = 1e-30 Identities = 155/200 (78%), Gaps = 2/200 (1%) Strand=Plus/Minus Query 563277 GGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCTTGAATCTTCAAGTTGTTTTCC 563336 |||| |||||| ||| |||||||||| ||| |||||| ||| || | ||||||||| Sbjct 466162 GGTAGATTCTTTTTGAATGTTGTAATCAGATAGTGTTCTTCCATCCTCTAATTGTTTTCC 466103 Query 563337 GGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCTTTATCTTGAATTTTTTGTTT 563396 || ||||| | |||||| |||||||| ||||| |||||||||||||||||||| ||| Sbjct 466102 AGCGAAAATTAATCTTTGTTGATCAGGTGGAATACCTTCTTTATCTTGAATTTTAGCTTT 466043 Query 563397 TACTGCCTCAATTGTATCAG-TGTGAGTACATTCGAGAGTAACAGTTTTACCAGTAAGAG 563455 || ||||| ||||||| || ||| || ||||||| ||||| || || | || Sbjct 466042 AACATTTTCAATAGTATCAGATGGTTCAACA-TCAAGAGTAATTGTTTTCCCGGTTAAAG 465984 Query 563456 TTTTAACGAAAATTTGCATA 563475 |||| |||||||| |||||| Sbjct 465983 TTTTTACGAAAATCTGCATA 465964 Score = 125 bits (138), Expect = 6e-23 Identities = 153/206 (74%), Gaps = 2/206 (1%) Strand=Plus/Minus Query 563271 ATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCTTGAATCTTCAAGTTG 563330 ||| | |||| |||||| ||| || || |||| || ||||| ||||| | ||| Sbjct 466624 ATGTAAGGTAGATTCTTTTTGAATGTTATAGTCAGATAATGTTCTACCGTCTTCTAATTG 466565 Query 563331 TTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCTTTATCTTGAATTTT 563390 |||||| || ||||| | |||||| |||||||| || || |||||||||||||||||||| Sbjct 466564 TTTTCCAGCGAAAATTAATCTTTGTTGATCAGGTGGGATACCTTCTTTATCTTGAATTTT 466505 Query 563391 TTGTTTTACTGCCTCAATTGTATCAG-TGTGAGTACATTCGAGAGTAACAGTTTTACCAG 563449 ||| || ||||| ||||| | || ||| || ||||||| ||||| || | Sbjct 466504 GGCTTTAACGTTTTCAATAGTATCTGATGGTTCAACA-TCAAGAGTAATTGTTTTTCCGG 466446 Query 563450 TAAGAGTTTTAACGAAAATTTGCATA 563475 | | ||||| ||||||||||||||| Sbjct 466445 TTAATGTTTTTACGAAAATTTGCATA 466420 Score = 105 bits (116), Expect = 5e-17 Identities = 106/138 (77%), Gaps = 0/138 (0%) Strand=Plus/Minus Query 563277 GGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCTTGAATCTTCAAGTTGTTTTCC 563336 |||| |||||| ||| || || |||| || |||||| |||||| | ||| ||||| Sbjct 465934 GGTAGATTCTTTTTGAATGTTATAGTCAGATAATGTTCTTCCATCTTCTAATTGCTTTCC 465875 Query 563337 GGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCTTTATCTTGAATTTTTTGTTT 563396 |||||||| | |||||| |||||||| || || |||||||||||||||||||| ||| Sbjct 465874 AGCAAAAATTAATCTTTGTTGATCAGGTGGGATACCTTCTTTATCTTGAATTTTAGCTTT 465815 Query 563397 TACTGCCTCAATTGTATC 563414 || ||||| ||||| Sbjct 465814 AACATTTTCAATGGTATC 465797 >seq10 Length=1634725 Score = 170 bits (188), Expect = 2e-36 Identities = 408/605 (67%), Gaps = 19/605 (3%) Strand=Plus/Minus Query 428095 TGAATAACCGGTTCCAATTCCTTCTGTACCATTTACAAGAATCATTGGAATGACTGGTGC 428154 |||||| || ||||| |||||||| |||||||| ||||| | ||||| |||||| Sbjct 515637 TGAATACCCAGTTCCTATTCCTTCACATCCATTTACTAGAATTGTAGGAATAACTGGTAT 515578 Query 428155 ATAATATTGTGGTTCAATCATTTTATTATCTTCATATTGTAAATGTAAAATATCAAAATC 428214 ||||||||||||||| || ||| ||||||| | | | |||||| | || Sbjct 515577 ATAATATTGTGGTTCTATTTTTTGTCCTTCTTCATTTAAATATTTTAAAATTGGATCGTC 515518 Query 428215 ATGCTCGATAAATAtttttttAGCCAATTCATCAAGTTGTGTAAAGATATATCTTGCGCT 428274 | || ||||||| || ||| || |||||| |||||| ||||| || || Sbjct 515517 AAATTCATTAAATATACTTCTAGTAGATGATGCAAGTTTTGTAAATATATACCTAGCTGC 515458 Query 428275 TGCGGAATCTTTACCTCCTGACATTCTAGTTCCAAATTGTCCATTAGGCATC-AATAAAT 428333 || | ||| ||||| ||| ||||| | |||||||||||| ||| || | |||| Sbjct 515457 TGATGCATCCTTACCACCTTCTTTTCTACTACCAAATTGTCCA-CAGGGTTCTAGAAAAT 515399 Query 428334 TAATATTATTACTTCCCACATAATTTTGGGCCATATTAACAATGGTACTAGT--TAAGGA 428391 | ||||| || || ||| | |||| |||||||| | ||| || | || ||| || Sbjct 515398 TTATATTGTTTGAACCGACAAATGTTTGCGCCATATTTATAATAGT--TTGTTGTAATGA 515341 Query 428392 TTGTTCACCATGATGATATTTAGTTCTTTTTGAAACTGCACCTTGTAATTCTGATACCTT 428451 | |||||||||||||||| | | || || || ||| | | | || || Sbjct 515340 TGATTCACCATGATGATATGCACTATGTTCTGCAATATAACCAACAAGCTGCGCGACTTT 515281 Query 428452 TATTTCTTCTTTATAAATACCTTCTTCTACTG-ATCCATAAAATACTTTGCGTTGTGATG 428510 ||| | || ||||| ||||| || | | ||||| || ||||| | |||| || Sbjct 515280 ACATTCAT-TTCTTAAAT---TTCTTTTAAAGCAACCATATAAAACTTTTCTTTGTCCTG 515225 Query 428511 GTTTGAATCCATCCATAATATTAGGTATAGATCTTAAATTATCATCCACTGAGAAT--GA 428568 |||| |||||||||||||||| |||||| |||| |||||| | ||||| | Sbjct 515224 GTTTCCATCCATCCATAATATTTGGTATACTTCTTTCTGTATCAT--ATCTAGAATAATA 515167 Query 428569 TATTAGTTCTTGATGAATGAAATCATAATATGATACTCGTTTTTGTGCATTATCAATGTA 428628 ||||| ||||| || | |||||||||||||||| ||||| | || ||||| || Sbjct 515166 TATTAATTCTTTATTTACAAAATCATAATATGATAAATCTTTTTCTTTATGATCAACATA 515107 Query 428629 ATTGTTGGGATTAT--AAGTATTTACCCATATTTTTCGATCATTTTCTCtttttttATCA 428686 || | ||| || | | || ||||| ||| ||||| | |||||||||| | Sbjct 515106 --TGAACCAAGTATAAAATTTTGTAGCCATAATTTACGATCTTCAATTCTTTTTTTACTA 515049 Query 428687 AAAGC 428691 ||||| Sbjct 515048 AAAGC 515044 Score = 111 bits (122), Expect = 1e-18 Identities = 213/314 (68%), Gaps = 15/314 (5%) Strand=Plus/Minus Query 430244 ATATTCGCTAATTTTGCTCCGAATCCATTTTTACCACCAACAAtttttttttCACCTTTA 430303 ||||| | || ||| |||||||| |||||| ||||||| ||| | | |||| | | | Sbjct 513428 ATATTTGTTAGTTTAGCTCCGAAACCATTTCTACCACCTGTTATTCTGTCTTCAGCATCA 513369 Query 430304 TCATAATTAGTGGATGTTAATAGTTCTCCAAAAATCATCGATGGTACCATGATTTTATGT 430363 ||||||||| |||||||||| ||| ||||||||||| ||||| || || | Sbjct 513368 TCATAATTATCAGATGTTAATAATTCACCAAAAATCATATGAGGTACATATATATTCATT 513309 Query 430364 TCTTTATGCTCGACGACATCAATACCATCACCATTATTCCAAACACTAATTTCTCCAGAT 430423 |||||||| | || ||||| || |||| ||| | ||||| |||| | | Sbjct 513308 TCTTTATGTATATCTACTGGTATACCTTCTCCATCATTATATACACTTATTTTTTTTTGT 513249 Query 430424 TCTTCATTGATGTCGACTTTTAT-CATATTACATGATTTGCA------TCTTTTAC---- 430472 ||| ||| || || | |||||| || | | | | ||| || |||||| | Sbjct 513248 TCTCTATTTATTTCTATTTTTATACAAGTCATAGGGTTTTCACTTTTTTCTTTTTCTCGA 513189 Query 430473 ----TATGATCCGCTGAATTTACAAGAACTTCATCATATATTTTATAAAGTCCTGGTACA 430528 | ||| |||| || |||| || ||||||| |||||||||| | ||||||||| Sbjct 513188 GCTTTTACATCAGCTGCGTTAACAATAATTTCATCAAATATTTTATATAACCCTGGTACA 513129 Query 430529 TAAGATATTTCTTT 430542 |||| ||| | ||| Sbjct 513128 TAAGTTATGTTTTT 513115 >seq14 Length=2514833 Score = 152 bits (168), Expect = 4e-31 Identities = 135/166 (81%), Gaps = 2/166 (1%) Strand=Plus/Minus Query 930654 AAAGTATTAATTGATTTTTCTTCACCAAATATTGCCAAAGAAATGCATATTGGACATTTG 930713 || ||||| |||||||||||||||||||||||||| |||||||||||| |||| ||||| Sbjct 1283400 AATGTATTGATTGATTTTTCTTCACCAAATATTGCAAAAGAAATGCATGTTGGTCATTTA 1283341 Query 930714 CGTTCTACCATTATTGGAGAATCTTTATGTAGATTATATGAATATTGTGGAAGTAAAGTT 930773 | || ||||| | ||||| || | | | | ||| ||||| || | ||||||| Sbjct 1283340 AGATCAACCATATTAGGAGATACTATTTCCAAAGTATTTGAATTTT-TAAAAGTAAAAAC 1283282 Query 930774 -CATCGAGTCAATCATATTGGTGATTGGGGAACACAATTTGGTATG 930818 ||| ||||||||||| ||||||||||||||||||||||||||||| Sbjct 1283281 ACATAGAGTCAATCATGTTGGTGATTGGGGAACACAATTTGGTATG 1283236 >seq13 Length=2616835 Score = 149 bits (164), Expect = 5e-30 Identities = 336/490 (69%), Gaps = 20/490 (4%) Strand=Plus/Minus Query 367267 GATGGACCTCCATTTGCCACAGG--TACAATGCATTATGGTCATATTTTAGTATCATCTA 367324 |||||||| |||||||| || || ||| | |||||||| ||| | |||| | | | Sbjct 1948913 GATGGACCACCATTTGCTACTGGATTACCA--CATTATGGGCATTTATTAGCAGGAATAA 1948856 Query 367325 TTAAAGACACCATAATTAGATATTTTACCATGAAG--GGTTACAAAGTTGATAGAAGAAA 367382 | ||||| ||| |||||||||| || || || || ||| || ||| || Sbjct 1948855 TAAAAGATTGTGTAACTAGATATTTTT--ATCAATCTGGATATTCAGTAGAAAGACGATT 1948798 Query 367383 TTCTTGGGATTGTCATGGAGTTCCAATTGAA-ATGT--TAGCTAAA-AAAGTAATCGGAT 367438 | |||||||||||||||| | || ||||| ||| ||| ||| ||| |||| || Sbjct 1948797 TGGTTGGGATTGTCATGGATTACCTGTTGAATATGAAATAGAGAAAGAAAATAAT---AT 1948741 Query 367439 ACACAACAAAGAAAGAATTATATGATTATGGAATTA-ATAATCATAATGATATTTGTCGT 367497 |||| |||||| || ||| | | |||| | || || ||||||| | ||| | Sbjct 1948740 TAACAAGAAAGAA-GATATAT-TAAAAATGGGAATAGATGTATATAATGAAAAATGTAGA 1948683 Query 367498 AATTTGGTTTTAAAATGTGCTGATCGCTGGTATCAAGATT-TTGAACGTATTGGAAGATG 367556 | | | |||||||||| | || || ||| | || | ||||| | ||||||||||| Sbjct 1948682 AGTATAGTTTTAAAATATTCTAATGAATGGG-TAAATACCGTTGAAAGAATTGGAAGATG 1948624 Query 367557 GATTGACGTAAAAAATGAATATAAAACAATGGATACTAATTTCATGGAATCTGTTATTTG 367616 ||||||| | ||||||| |||||||| ||||||| ||||| |||||| |||| || Sbjct 1948623 GATTGACTTTGAAAATGATTATAAAACTATGGATAAAAATTTTATGGAAAGTGTTTGGTG 1948564 Query 367617 GGCATTTAAACAATTATACGAACGCGGTATGATTTTTGAAGGTTATAAAGTAATGCCATA 367676 | |||| |||||||| || | |||| | || | |||||| |||||||| Sbjct 1948563 GATCTTTAGTCAATTATATAAAAAAAATTATATTTATAAATCATTTAAAGTTATGCCATA 1948504 Query 367677 TTCAACTGGTTGTAATACTGCTTTGTCACATTTTGAAGCCAAACAAAATTATCGAGAAGT 367736 |||| | |||||||| || | ||| |||||||| || ||||||| ||| || Sbjct 1948503 TTCATGTAAATGTAATACACCTATATCAAATTTTGAATTAAATTTAAATTATAAAGATGT 1948444 Query 367737 AGTTGATCCA 367746 ||||||| Sbjct 1948443 TTCTGATCCA 1948434 Score = 96.9 bits (106), Expect = 3e-14 Identities = 203/295 (69%), Gaps = 22/295 (7%) Strand=Plus/Plus Query 397049 TATTAGAATTAAATGCATCAAATGAACGTGGTATTGAAACTGT---TAGAACTAAAATTA 397105 |||||||||||||||||||| |||| | ||||| |||||| | || |||| | Sbjct 1155535 TATTAGAATTAAATGCATCAGATGACAGAGGTAT---AACTGTGGTTCGAGAGCAAATAA 1155591 Query 397106 AAA-ATTT--TGTATCAAGTAAAAATACTATATTTTTGCCAATGGAATTAAGAAACATAT 397162 ||| |||| || ||||| |||| | |||| | || || | ||||| | | Sbjct 1155592 AAACATTTGCTGAATCAA--AAAATCATTATAATATT-----TGTGA--AAGAACCTCTT 1155642 Query 397163 TTAAACTAGTAATATTAGATGAAATTGATTCCATGACAGTAGAAGCTCAAGGAATGTTAA 397222 | ||||| | |||||||||||| |||| |||||| | || ||| |||| || Sbjct 1155643 TAAAACTGATTATATTAGATGAAGCTGATCATATGACATTTCCTGCACAA--AATGCTAT 1155700 Query 397223 GACAA--ACTATTGAGAAAAATAGCAAAACTACACGTTTTTGCTTGATATGTAATGACAT 397280 || || | ||| || || || ||||| | ||||||||||| ||||||||| | | Sbjct 1155701 GAGAAGAATTATGGAAAATTATGCCAAAAATGTCCGTTTTTGCTTAATATGTAATTATGT 1155760 Query 397281 AGATAAAATAAATTTAGCTTTACAGTCAAGATGTTCACTTTTTAGATTTTCACCA 397335 ||||||| | |||| |||| ||||||||| || ||| ||||||| ||| Sbjct 1155761 TAATAAAATTACACCAGCTATACAATCAAGATGTACATCATTTCGATTTTCTCCA 1155815 Score = 89.7 bits (98), Expect = 4e-12 Identities = 164/236 (69%), Gaps = 6/236 (3%) Strand=Plus/Plus Query 393927 TTTTAATAACAAAATTAGCTCCTGGATATACA--CGACGTCCATTTTTTACTAATTGTGT 393984 |||| |||| | ||||||||||||| | ||| ||| |||||| ||| ||| | | Sbjct 1835836 TTTTTATAATATAATTAGCTCCTGGCCAAACATTCGA--ACCATTTCTTATTAACATTTT 1835893 Query 393985 TAAATATTCAATGTTATGTTTTGTCACAATTTCATCAAATGTTAAATTCATTGCAATAAT 394044 ||| | ||| || |||| ||| | || ||||| | | ||||| ||||||| || || Sbjct 1835894 TAATTTTTCTATATTATATTTATTAACCGTTTCAGGATAAGTTAATCTCATTGCTATTAT 1835953 Query 394045 TTGTGGTAGTCCCACTTCATTAAGAGCAATATTTGGATCCGAGGTAATAACTGTACGACC 394104 | |||| ||||||||| | | ||| |||||||| | | || || || | || Sbjct 1835954 CTTGGGTATAACCACTTCATCTATTGAAATGTTTGGATCTGGAGATATGACAGTCCTACT 1836013 Query 394105 TGACATATCCACACGTTTTCC-CATAAGATTTCCACGAATTCTACCTTCTTTACCT 394159 ||| | || || | |||||| ||||| || | | || |||||||||||| ||| Sbjct 1836014 TGAAAAGTCAACTCTTTTTCCTGATAAG-TTACATCTAAATCTACCTTCTTTCCCT 1836068 Score = 86.0 bits (94), Expect = 5e-11 Identities = 454/711 (64%), Gaps = 63/711 (9%) Strand=Plus/Minus Query 368502 GTTAAATAATAATTCTAAAATAAATTGGATGCCATCTAATATT--GGAACAAAACATTTT 368559 |||||| |||||| || || | ||||||| || | || || |||| |||| || Sbjct 1947539 GTTAAA-AATAATGATACAACATATTGGATACCTGCGCATGTTAAGGAAAAAAAA--TTC 1947483 Query 368560 GATAATTGGCTCCAAAATTCAGTTGATTGGTGTATTTCAAGAAGTAGGTTTTGGGGAACT 368619 |||||||| | || || | ||||||||||| || | ||| | ||||||||| Sbjct 1947482 CATAATTGGATTAAAGATGCTAAAGATTGGTGTATAAGTAGGAATAGATATTGGGGAACC 1947423 Query 368620 CCAATTCCAGTATGGAAATCTGATGATGGTGAAG-AAATTGTTTGTATAGGTTCAATTAA 368678 ||||||||| |||||| | ||| | | || || |||| |||| |||| || || Sbjct 1947422 CCAATTCCAATATGGACAGATGAAAA-GATGGAGCAAATAATTTGCATAGAAAGTATAAA 1947364 Query 368679 AGAATTGCAAGAATTATCTGGTGTGCAAAATATTAGTGATTTACATATTGATAAAATTGA 368738 | |||| || || | |||||| ||||| | ||||||||||| |||| ||||| Sbjct 1947363 ACAATTAGAAAAACTTAGTGGTGTTACTAATATCACTGATTTACATAGACATAATATTGA 1947304 Query 368739 TCACATTAAAATT--CCATCAAAGAAAGGAAAAGGTTT-----ATTGTCTCGAGTTGAAG 368791 ||| || | ||| ||| || | | |||| | | ||| || | | Sbjct 1947303 TCATATAACTATTGATGATCCTAG-AGGTAAAAATTATCCAAAATTAAAAAGAATATCTG 1947245 Query 368792 GAGTTTTGGATTGCTGGTTTGAATCAGGTTCTATGCCTTATGGTCAAATACATTATCCAT 368851 |||||| ||||| |||||||| ||||||||||| |||| | | | || | |||| Sbjct 1947244 AAGTTTTTGATTGTTGGTTTGAGAGTGGTTCTATGCCATATGCTAAGGTGCACTTCCCAT 1947185 Query 368852 TT---------GATAACGCAAAAT---ACTTTGAT--------------AATG------- 368878 || || || || || | | | ||| |||| Sbjct 1947184 TTTATTGCTCCGACAATGCCAATTCCGAAATCGATATCTCCAAAGTCCCAATGGAAAGTT 1947125 Query 368879 ---ATAAAGATTATGTGGCTGATTTTGTAACAGAATCAATTGATCAAACACGTGGTTGGT 368935 ||||| | | ||||||||| | ||||| | ||||||||| | ||||||| Sbjct 1947124 TTAATAAAATATTTCCAGCTGATTTTATTGCAGAAGGGTTAGATCAAACAAGAGGTTGGT 1947065 Query 368936 TTTATACCCTATTAG-TATTATCCACAGCTATTTTCGATAAACCGGCTTTTAAAAATGTA 368994 | ||||| | ||| ||||| ||| |||| ||||| | | ||||||||| || Sbjct 1947064 TCTATACTTTGCTAGTTATTA-GTACATTACTTTTTGATAAGGCACCATTTAAAAATTTA 1947006 Query 368995 A-TAGTAACTG-GTATTGTTAATGCATCTGATGGTCAAAAGAT--GTCAAAAAGTAAGGG 369050 | | ||||| | || | ||| |||||||||||| |||| || || | | | ||| Sbjct 1947005 ATTTGTAACGGTTTAATATTA--GCATCTGATGGTAAAAAAATGAGTAAGAGATTAA--A 1946950 Query 369051 TAATTATTCCGATCCTAATAT-TTTAATTGATAAATTTGGTGCTGATACTTTGAGATTAT 369109 |||||| |||| || ||||| | || | |||||| ||| || |||| ||| | |||| Sbjct 1946949 AAATTATCCCGA-CCCAATATATATATTAAATAAATATGGAGCAGATAGTTTACGTTTAT 1946891 Query 369110 ACCTATTGTCATCACCTGTAGTAAAAGCAGAATCTATTAAATTTGATGAAA 369160 | ||| | ||| | |||| |||||| | | |||||| | |||| Sbjct 1946890 ATCTAATTAATTCAGTAGCAGTACGTGCAGAAAATTTAAAATTTCAAGAAA 1946840 >seq12 Length=1682238 Score = 143 bits (158), Expect = 2e-28 Identities = 401/605 (66%), Gaps = 43/605 (7%) Strand=Plus/Minus Query 1047046 ATTGCTGATTGGTTTGCACAAATGAATCATAAAATGGGAGGTGATTTAGAAAAAATTAGA 1047105 ||||||||||||||||| ||| | ||| |||||||| || |||||| | ||||| | | Sbjct 839571 ATTGCTGATTGGTTTGCTCAACTTAATAATAAAATGTCTGGAGATTTAAATAAAATAAAA 839512 Query 1047106 GATGTGGGTAAATATTTCATTGAAGTATTTAAAGCATGTGGTATTAATATGTCTGGCACT 1047165 | || || ||||||| |||||||||| ||| |||||||| |||||| | Sbjct 839511 AAGGTTGGACAATATTTTATTGAAGTATGGAAAAGTTGTGGTATGAATATGGAAAATGTT 839452 Query 1047166 AAATTTATCTGGGCTAGTGAATTTTTTAATGATAATGCTACAAAATATTTTGAAAGAATG 1047225 ||||||| |||||||||| || ||| | || | | | || || ||| || | Sbjct 839451 CAATTTATGTGGGCTAGTG-ATGAAATAAATAAAAACCCAGATAA-ATATTGGTCGACAG 839394 Query 1047226 TTACATATTGCTA-ATCAGACATCTTTAGCA-----CGTGCTAAAAGATGTTGTCAAATT 1047279 | ||||| || |||| | |||| | || ||||||||||| || Sbjct 839393 T----TATTGATATATCAAGGAGTTTTAATATTAATCGAATTAAAAGATGTTTAACTATA 839338 Query 1047280 ATGGGACGTAGAGAAGGTGATG--AATTATCTTCGTCACAAATTATATATCCTTGTATGC 1047337 ||||| || | ||||| || | ||||| | || |||||| |||| || ||||||| Sbjct 839337 ATGGGTCGAACTGAAGGAGAAGATAATTA--CTGTTCTCAAATTTTATACCCATGTATGC 839280 Query 1047338 AAGTAGCAGATATTTTTGAATTAAATCCAAATGGAATTGATATTTGTCAACTTGGTGTTG 1047397 || ||||||||||| |||||| | |||||||||||| | || || Sbjct 839279 AATGTGCAGATATTTTCTTTTTAAAT---------GTCGATATTTGTCAATTAGGGACTG 839229 Query 1047398 ATCAAAGAAAAGTTAATATGTTAGCCATTGAATAT-----GCTAAACGTAATAATTTAAA 1047452 ||||||||||||| |||||| |||| | |||||| |||| ||||| ||| Sbjct 839228 ATCAAAGAAAAGTAAATATGCTAGCTAGAGAATATTGTGATATAAAAAAAATAA--AAAA 839171 Query 1047453 AACACCAATTATTTTATCTCACCATATGTTAATGGGATTGAAAG-GTTCCAAAAATAAAA 1047511 || ||| ||||||||||||| ||| || || || || | ||| || |||| Sbjct 839170 AAAACCTGTTATTTTATCTCATGGAATGCTACCAGGTTTATTAGAGGGACAAGAA-AAAA 839112 Query 1047512 TGAGTAAATCTGATCCTGAAAA---TGCCATATTTATGGAAGATAGTCGTGAAGATATAT 1047568 || || || || |||||| ||| || |||||||| |||| | | |||| | Sbjct 839111 TGTCAAAGTCCGA---TGAAAACTCTGCAATTTTTATGGATGATAATGAAGCAGATGTTA 839055 Query 1047569 TTaaaaaaaTACACAAAGCATATTGC---ACAGACGAAATTATTGATAATCCAATTTATG 1047625 || ||||| | |||| |||||| || | | |||| ||||||| |||| || Sbjct 839054 ATAGGAAAATTAAAAAAGGCTATTGCCCTCCAAATGTAATTGAAAATAATCCTATTTTTG 838995 Query 1047626 AATAT 1047630 |||| Sbjct 838994 CATAT 838990 >seq9 Length=1345096 Score = 134 bits (148), Expect = 1e-25 Identities = 209/299 (70%), Gaps = 0/299 (0%) Strand=Plus/Plus Query 552301 TAGATGTTACTCCTCTATCTCTTGGTTTAGAAACAGTTGGAGGTATTATGACTAATCTTA 552360 ||||||||| ||| ||||| | ||| | |||||| | || ||| || | || || | | Sbjct 1074236 TAGATGTTATACCTTTATCTTTAGGTATTGAAACATTAGGTGGTGTTTTTACAAAATTAA 1074295 Query 552361 TCGATAGAAATACTACTATTCCTTGTAAAAAATCTCGTGTATTTTCTACGTATTCAGATA 552420 | |||||||||| ||||| || |||||||||| |||||||| || |||||| Sbjct 1074296 TTAATAGAAATACAACTATCCCAACCAAAAAATCTCAAGTATTTTCAACTGCAGCAGATA 1074355 Query 552421 ATCAAACTGCTGTTACAATTCAAATTTTTGAAGGAGAAAGAAAATTCACTAAAGATAATA 552480 |||||||| || | || || | ||| ||||||||||| || | | || |||| Sbjct 1074356 ATCAAACTCAAGTCAGTATCAAAGTATTTCAAGGAGAAAGAGAAATGGCCTGTGACAATA 1074415 Query 552481 ATCAACTTGGTACTTTTAATTTAGAAGGTATTCCTCCTGCTCCTCGTGGAGTACCGCAAA 552540 | || ||| | ||| |||| | ||||| || || || || | || || || |||| Sbjct 1074416 AAATGCTAGGTTCATTTGATTTGGTTGGTATACCACCAGCCCCAAGAGGTGTTCCACAAA 1074475 Query 552541 TTGAAGTTACTTTCGATATCGATGCCAATGGAATTTTGAATGTGACTGCTTGTGATAAA 552599 ||||||| || || ||| | ||||| |||| |||| | ||| | | ||| |||||| Sbjct 1074476 TTGAAGTCACATTTGATGTAGATGCAAATGCAATTATTAATATTTCAGCTATCGATAAA 1074534 Score = 114 bits (126), Expect = 1e-19 Identities = 104/131 (79%), Gaps = 0/131 (0%) Strand=Plus/Minus Query 361705 ACCATAAGCTAATGAAGCAGCTGTTGGTTCGTTAATTATTTTAATAACATTGAGTCCCGC 361764 |||| ||||||| | ||| || |||||||| ||||| ||| | | ||||| || || || Sbjct 1073616 ACCAAAAGCTAAAGCAGCTGCAGTTGGTTCATTAATAATTCTTAAAACATCTAGACCTGC 1073557 Query 361765 TATTTTTGATGCATCTAAAGTGGCTTGACGTTGTGCATCATTAAAATATGCAGGAACAGT 361824 ||||| |||||| |||||||| | ||||| |||||||||||||||||| ||||| Sbjct 1073556 AATTTTACCAGCATCTTTTGTGGCTTGCCTTTGTGAATCATTAAAATATGCAGGTACAGT 1073497 Query 361825 AATCACTGCTT 361835 ||| ||||||| Sbjct 1073496 AATAACTGCTT 1073486 Score = 105 bits (116), Expect = 5e-17 Identities = 93/116 (80%), Gaps = 0/116 (0%) Strand=Plus/Plus Query 550400 GCAGTAATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCT 550459 ||||| || |||||||| |||||||||||||| |||||| | ||||| || ||||||||| Sbjct 1073488 GCAGTTATTACTGTACCTGCATATTTTAATGATTCACAAAGGCAAGCCACAAAAGATGCT 1073547 Query 550460 GGACGTATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGC 550515 || ||||| || || ||||| | | ||||| |||||||| ||||| ||||| Sbjct 1073548 GGTAAAATTGCAGGTCTAGATGTTTTAAGAATTATTAATGAACCAACTGCAGCTGC 1073603 >seq11 Length=1720574 Score = 132 bits (146), Expect = 4e-25 Identities = 160/213 (75%), Gaps = 6/213 (3%) Strand=Plus/Plus Query 563265 TACAAGATGAAGGGT--ACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCTTGAATCT 563322 ||| | ||| | ||| ||| | |||| ||| || || |||| || |||||| |||| Sbjct 1496422 TACCAAATGTAAGGTTGACTCTTTTTG--AATGTTATAGTCAGATAATGTTCTTCCATCT 1496479 Query 563323 TCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCTTTATCT 563382 || | ||||||||| || ||||| | |||||| |||||||| |||||||||||||||||| Sbjct 1496480 TCTAATTGTTTTCCAGCGAAAATTAATCTTTGTTGATCAGGGGGAATTCCTTCTTTATCT 1496539 Query 563383 TGAATTTTTTGTTTTACTGCCTCAATTGTATCAG-TGTGAGTACATTCGAGAGTAACAGT 563441 || |||||| ||| || ||||||||||||| || ||| || ||||| | || Sbjct 1496540 TGGATTTTTGCTTTAACATTTTCAATTGTATCAGATGGTTCAACA-TCAAGAGTGATTGT 1496598 Query 563442 TTTACCAGTAAGAGTTTTAACGAAAATTTGCAT 563474 ||| || || | ||||| || || |||||||| Sbjct 1496599 TTTTCCGGTTAATGTTTTTACAAAGATTTGCAT 1496631 >seq3 Length=624158 Score = 116 bits (128), Expect = 3e-20 Identities = 203/290 (70%), Gaps = 4/290 (1%) Strand=Plus/Minus Query 344255 TTTTATCTCCCACCATTTGTTTGAGACGTTGATAATATGTTGGACCAATGAATATTTTAA 344314 |||||||| ||||||| ||||| | | ||||||| ||||||| || || ||||||||| Sbjct 500524 TTTTATCTTCCACCATATGTTTTAATCTTTGATAAAATGTTGGTCCTATAAATATTTTAG 500465 Query 344315 CTTCCATTCTTTGTCCCGTCATTCC-ATTATACATTGTTTCATTTCCCCATGCTTCATGT 344373 || | | || | || | || || |||||| | | | ||||| || || ||||| Sbjct 500464 ATTTTAG-CATTCTACCATTATGCCCATTATATAATATATCATTACCGTATTTTTCATAA 500406 Query 344374 CCTAAAGCTAC-TAAATCATCATTAATTTTATTAATATTAACTCCTGTAAATGGAGTTGC 344432 ||||| ||| |||| || ||||| | || ||| | | |||||||||||| Sbjct 500405 CCTAAT-CTATGTAAACGTTCCGAAATTTCTTGAACTGTAATTTTAGAAAATGGAGTTGC 500347 Query 344433 ATCTCCATATACCCCTTTAATTGCACAAACTTTACCTAGTAAACATTCAATTAATTGACC 344492 |||||| | | | |||| ||| ||| || ||||| ||| ||||||| ||| || || Sbjct 500346 ATCTCCTTCTCCTCCTTCAATAGCAGCTACCTTACCAGCTAAGCATTCAACTAAATGCCC 500287 Query 344493 TATCGTCATACGTTTGGGCATACAATTAGGATTAATAATAATATCAGGAA 344542 || |||||||| || | || || || |||||||||||||||| Sbjct 500286 GATAGTCATACGAGATGGAACTGCATGTGGGTTCATAATAATATCAGGAA 500237 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 4029293937504110