Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmodium_20chabaudi_20chabaudi_20[refseq_20GCF_5F900002335.2_20201 4-08-27] 39 sequences; 18,867,781 total letters Query= NC_020864.1 Length=205622 Score E Sequences producing significant alignments: (Bits) Value seq7 585 3e-162 seq8 349 5e-91 seq6 212 8e-50 seq11 150 2e-31 seq9 125 9e-24 >seq7 Length=1169068 Score = 585 bits (648), Expect = 3e-162 Identities = 1120/1631 (69%), Gaps = 21/1631 (1%) Strand=Plus/Minus Query 195299 GCTATTGGTATCGATTTAGGAACTACTTACTCATGTGTTGGTGTATGGCAAAATGATCGT 195358 ||||| |||||||||||||| || |||||||| ||||||||||||||| |||||| | Sbjct 769867 GCTATAGGTATCGATTTAGGTACCACTTACTCCTGTGTTGGTGTATGGAGAAATGAAAAT 769808 Query 195359 GTAGAGATTATCCCGAATGACCAAGGAAACCGTACAACTCCATCGTACGTTGCCTTTACA 195418 || || || || | || || ||||| ||| | ||||| ||||| || ||||| || || Sbjct 769807 GTTGATATAATTGCTAACGATCAAGGTAACAGAACAACCCCATCCTATGTTGCTTTCACT 769748 Query 195419 GATAATGAACGTCTCGTTGGAGATGCCGCAAAAAATCAGACAGCTATGAACCCTATCAAT 195478 |||| ||| | | |||| ||||| || |||||||| || | || || ||| Sbjct 769747 GATACAGAAAGATTAATTGGTGATGCAGCTAAAAATCAAGTTGCAAGAAATCCAGAAAAT 769688 Query 195479 ACTGTCTTTGACGCGAAGCGTCTTATTGGTCGCAAGTTTTCGGATAAGAAAGTCCAAGAC 195538 || ||||| || || || | | || || | || ||| | || ||| ||| Sbjct 769687 ACAGTCTTCGATGCAAAAAGATTAATAGGAAGGAAATTTACAGAATCTTCAGTACAAAGT 769628 Query 195539 GATATAAAGGACTGGTCTTATGAAGTTGTTCCCGGTGTGGCTGATAAGCCTATGATTAAT 195598 ||||| || ||||| | | | ||| | ||| | | || || ||||||||| | Sbjct 769627 GATATGAAACACTGGCCATTTACAGTCAAATCAGGTATTGAAGAAAAACCTATGATTGAA 769568 Query 195599 GTTGAATTTCACGGTGAGAAGAAACAATTTGCTCCCGAAGAAATTTCGTCTATGGTGTTG 195658 |||| | ||| |||||||| ||| |||| || ||||||||||| |||||||| || Sbjct 769567 GTTGTTTATCAAGGTGAGAAAAAATTATTTCACCCTGAAGAAATTTCTTCTATGGTTTTA 769508 Query 195659 ATTAAGATGAAGGAGACTGCGGAATCTTTCATGGGTAAAACTGTGAAAGATGCAGTTGTG 195718 || ||||| || | ||| ||| | || | || ||| || | ||| |||| || | Sbjct 769507 CAAAAAATGAAAGAAAATGCAGAAGCCTTTTTAGGAAAATCTATAAAAAATGCCGTCATC 769448 Query 195719 ACTGTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCTGCTGCTATT 195778 || |||||||| || || | ||||| ||| | || || ||||| || |||| | | ||| Sbjct 769447 ACAGTACCTGCATATTTTAACGATTCTCAAAGGCAAGCAACAAAAGATGCTGGTACAATT 769388 Query 195779 GCGGGTCTAAACTGTCTTAGAATTATCAATGAACCAACAGCGGCTGCAATTGCTTATGGT 195838 || || |||| | | |||||||| ||||||||||| || || || ||||| |||||| Sbjct 769387 GCAGGATTAAATGTTATGAGAATTATAAATGAACCAACTGCAGCAGCTATTGCATATGGT 769328 Query 195839 CTGGACAAGAACAAGGACGA--AGATAAAAATGTATTGATCTTTGATCTCGGTGGTGGTA 195896 | |||| || |||| | ||| |||||| | || || || ||| | || ||||||| Sbjct 769327 TTACACAAAAA--AGGAAAAGGAGAAAAAAATATTTTAATTTTCGATTTAGGAGGTGGTA 769270 Query 195897 CGTTTGATGTCTCACTTCTCAATATTGAAGGTGGTATATTCGAAGTAAAGGCTACTGCTG 195956 | |||||||| ||| | || | |||||||| ||||||||||||||| || || || || | Sbjct 769269 CTTTTGATGTTTCATTACTTACTATTGAAGATGGTATATTCGAAGTTAAAGCAACAGCAG 769210 Query 195957 GTGATACTCATCTAGGTGGTGAAGATTTCGATGCACGTCTTCTCCGTCATTTG-TCTGAT 196015 | ||||| ||| |||||||||||||||| ||| ||| || | |||| ||| Sbjct 769209 GAGATACCCATTTAGGTGGTGAAGATTTTGATAACCGT-TTAGTAAACTTTTGCGTTGAA 769151 Query 196016 GAGTTCCGTCGAAAGAATA-AG--AAAGATATTTCTGGAAATCCTAGGGCTCTTCGTCGG 196072 || || |||| |||| || |||||| | || |||| ||| ||| | | | Sbjct 769150 GATTTTAAAAGAAAAAATAGAGGCAAAGATTTATCAAAAAATAGTAGAGCTTTAAGAAGA 769091 Query 196073 CTTAGGACTGCATGTGAACGTGCCAAACGAACTCTCTCTTCTACGGCTCAAACAATGGTT 196132 | || || ||||||| | || ||||| || | |||||| | ||||| ||| || Sbjct 769090 TTAAGAACACAATGTGAAAGAGCAAAACGTACCTTATCTTCTTCAACTCAAGCAACAATT 769031 Query 196133 GAGATTGATTCGTTGTTTGACGGAATTGACTTCTA-TACAACTATTACCCGTGCACGTTT 196191 || |||||||| | ||||| || ||||| || || | ||| ||| | || | || Sbjct 769030 GAAATTGATTCTCTTTTTGAAGGTATTGA-TTATAGTGTAACAGTTAGTAGAGCTAGATT 768972 Query 196192 TGAAGAGTTAAACTCTGATTTGTTTAGGAAGTGTATGGA-ACCTGTTGAACAAGTACTTC 196250 |||||| ||| ||| | |||| || | || | |||||||||| |||| | Sbjct 768971 TGAAGAATTATGTATTGACTATTTTA-GAGATACATTAATACCTGTTGAAAAAGTTTTAA 768913 Query 196251 GTGACGCAAAGATGGATAAGTCTAAGGTTGATGAAATTGTCCTTGTGGGAGGATCAACCC 196310 || || | |||||| || | ||| ||||| ||||| | || || ||||| || Sbjct 768912 AAGATGCCATGATGGACAAAAAGAGTGTTCATGAAGTTGTCTTAGTTGGTGGATCTACAA 768853 Query 196311 GTATTCCGAAGATTCAACAGATGCTTTCTAG-CTTCTTCAATAATAAAGATTTAAACAAA 196369 | ||||| || |||||| | || | || ||||| ||| |||||| | || | Sbjct 768852 GAATTCCAAAAATTCAA-ACATTAATAAAAGAATTCTTTAATGGTAAAGAAGCATGCAGA 768794 Query 196370 ACGATCAACCCGGATGAAGCAGTTGCTTATGGTGCGGCCGTTCAGGCTGCTATTCTCTCA 196429 | ||||| || |||||||| |||||||||||||| || || || || || ||| | ||| Sbjct 768793 TCAATCAATCCTGATGAAGCTGTTGCTTATGGTGCTGCTGTCCAAGCCGCCATTTTATCA 768734 Query 196430 GGTGTTGACAAT--AATAACGTCCAAGATCTTCTGCTACTTGATGTTGCACCCGTATCCC 196487 |||| | |||| ||| || |||||| | | || | ||||| || |||| Sbjct 768733 GGTGAT--CAATCCAATGCAGTACAAGATTTATTATTATTAGATGTCTGTTCCTTATCTT 768676 Query 196488 TGGGTCTTGAAACAGCGGGTGGTGTTATGACTAAAATTATTGATAGGAACACAACTATTC 196547 | || | ||||| || || ||||||||||| ||| | ||||| || || ||||| |||| Sbjct 768675 TAGGATTAGAAACTGCAGGAGGTGTTATGACAAAATTAATTGAAAGAAATACAACAATTC 768616 Query 196548 CGACTAAGAAGGAACAAGTCTTTTCAACGTATTCCGATAATCAACCAGGTGTTCATATTC 196607 | | || || ||| | ||| | || ||| | ||||||||||||||||| || | Sbjct 768615 CAGCCAAAAAAAGTCAAATTTTTACCACCTATGCTGATAATCAACCAGGTGTGTTAATAC 768556 Query 196608 AAGTATATGAAGGAGAACGCTCCCGTGCAAAGGATAACCATCTACTTGG-AACTTTCGAT 196666 ||||||||||||||||| | || | || ||||| | || | || || |||| || Sbjct 768555 AAGTATATGAAGGAGAAAGAGCCTTAACCAAAGATAATAACTTATTAGGTAAATTTC-AT 768497 Query 196667 TTGACGGGGATTCCAGCTGCACCCAGAGGTGTTCCACAGATTAATGTTTGCTTCGATATA 196726 || || |||||| |||| || ||| |||||||| ||| | ||| ||| ||||| Sbjct 768496 TTAGATGGTATTCCACCTGCTCCTAGAAAGGTTCCACAAATTGAAGTTACCTTTGATATT 768437 Query 196727 GACGCAAATGGAATTCTAAACGTCACAGCTGAGGACAAGGCTTCTGGCAAATCTGAAAAG 196786 || |||||||| || |||| |||||||||| || || | |||| ||| | | Sbjct 768436 GATGCAAATGGTATCTTAAATGTCACAGCTGTTGAAAAAAGTACTGGTAAACAAAATCAT 768377 Query 196787 ATTGTGATTACCAATGACAAGGGGCGGCTTTCTAAGGAGGAAATTGAACGTATGGTTCAA 196846 || ||||| |||||||| || | | ||| || |||||||| | |||||| | Sbjct 768376 ATCACCATTACTAATGACAAAGGTAGATTATCTCCTGAAGAAATTGATAGAATGGTTAAT 768317 Query 196847 GATGCGGAAAAGTACAGGGAAGAAGACGAGGTATATGAGAAACAGATGAAAGCTATAAAT 196906 ||||| ||||| || | | |||||| || | | || | ||| || |||| | ||| Sbjct 768316 GATGCTGAAAAATATAAAGCAGAAGATGAAGAAAATAAAAAAAGAATTGAAGCAAGAAAC 768257 Query 196907 GATCTAGAAAA 196917 ||| ||||| Sbjct 768256 AGTCTTGAAAA 768246 >seq8 Length=1360204 Score = 349 bits (386), Expect = 5e-91 Identities = 1032/1572 (66%), Gaps = 48/1572 (3%) Strand=Plus/Plus Query 195301 TATTGGTATCGATTTAGGAACTACTTACTCATGTGTTGGTGTATGGCAAAATGATCGTGT 195360 |||||||||||||||||| ||||||||| ||||||||||||| |||||| | || Sbjct 744024 TATTGGTATCGATTTAGGTACTACTTACAGTTGTGTTGGTGTATTTAAAAATGGAAGAGT 744083 Query 195361 AGAGATTATCCCGAATGACCAAGGAAACCGTACAACTCCATCGTACGTTGCCTTTACAGA 195420 || || | ||||| ||| ||||||| |||||||| || || | ||| || Sbjct 744084 TGAAATATTAAACAATGATTTAGGTAACCGTATTACTCCATCATATGTATCATTTGTTGA 744143 Query 195421 TAATGAACGTCTCGTTGGAGATGCCGCAAAAAATCAGACAGCTA---TGAACCCTA-TCA 195476 | ||| | ||||| || || || ||| | ||| ||||| | |||| | ||| Sbjct 744144 TGGAGAAAGGAAAGTTGGTGAAGCAGCTAAA--TTAGA-AGCTACTTTACACCCAACTCA 744200 Query 195477 ATACTGTCTTTGACGCGAAGCGTCTTATTGGTCGCAAGTTTTCGGATAAGAAAGTCCAAG 195536 | ||||| ||||| | ||| | ||||| ||| | || ||| ||||| ||||| | Sbjct 744201 A-ACTGTATTTGATGTTAAGAGACTTATAGGTAGGAAATTTGATGATAAAGAAGTCGTAA 744259 Query 195537 ACGATATAAAGGACTGGTCTTATGAAGTTGTTCCCGGTGTGGCTGATAAGCCTATGATTA 195596 | |||| || | | |||||| | || | || | | || || | || | Sbjct 744260 AAGATAGAACTTTATTACCATATGAAATAGTAAACAATGAAGGT---AAACCAAATATCA 744316 Query 195597 ATGTTGAATTTCACGGTGAGAAGAAACAA-----TTTGCTCCCGAAGAAATTTCGTCTAT 195651 ||| || | | ||| || | | ||||| || ||| ||||| |||| Sbjct 744317 GAGTTCAAATAAA-----AGACAAACCCACTACTTTTGCACCTGAACAAATTAGTGCTAT 744371 Query 195652 GGTGTTGATTAAGATGAAGGAGACTGCGGAATCTTTCATGGGTAAAACTGTGAAAGATGC 195711 ||| || || ||||| || | ||| |||| || |||||||| | || ||| |||| Sbjct 744372 GGTTTTAGAAAAAATGAAAGAAATTGCTCAATCCTTTTTGGGTAAACCCGTAAAAAATGC 744431 Query 195712 AGTTGTGACTGTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCTGC 195771 ||||| ||||||||||| || |||| |||| ||||| |||| || ||||| || |||| Sbjct 744432 TGTTGTTACTGTACCTGCATATTTCAATGATGCACAAAGACAAGCTACAAAAGATGCTGG 744491 Query 195772 TGCTATTGCGGGTCTAAACTGTCTTA-GAATTATCAATGAACCAACAGCGGCTGCAATTG 195830 ||| ||||| || |||| | | || | ||||| |||||||| || || ||||| | | Sbjct 744492 TGCAATTGCTGGATTAAA-TATAGTACGTATTATTAATGAACCCACCGCTGCTGCTTTAG 744550 Query 195831 CTTATGGTCTGGACAAGAACAAGGACGAAGATAAAAATGTATTGATCTTTGATCTCGGTG 195890 |||||||| | || || || ||||| | || | | || | | ||| | || | Sbjct 744551 CTTATGGTTTAGATAAAAAA------GAAGAAACAAGTATTTTAGTATACGATTTAGGAG 744604 Query 195891 GTGGTACGTTTGATGTCTCACTTCTCAATATTGAAGGTGGTATATTCGAAGTAAAGGCTA 195950 ||||||| |||||||| || || | |||||| |||| |||| ||||| | || | Sbjct 744605 GTGGTACTTTTGATGTTTCTATTTTAGTTATTGATAATGGTGTATTTGAAGTCTATGCAA 744664 Query 195951 CTGCTGGTGATACTCATCTAGGTGGTGAAGATTTCGATGCACGTCTTCTCCGTCATTTGT 196010 | || ||| ||||||| |||| ||||||||||| ||| | | || | |||| | Sbjct 744665 CAGCAGGTAATACTCACTTAGGAGGTGAAGATTTTGATCAAAGAGTTATGGACTATTT-T 744723 Query 196011 CTGATGA-GTTCCGTCGAAAGAATAAGAAAGATATTTCTGGAAATCCTAGGGCTCTTCGT 196069 | | | ||| ||| ||||| | |||| || | || || ||| ||| Sbjct 744724 ATAAAAATGTTTAAAAAAAAAAATAATATAGATCTTAGATCAGATAAAAGAGCTATTCAA 744783 Query 196070 CGGCTTAGGACTGCATGTGAACGTGCCAAACGAACTCTCTC--TTCTACGGCTCAA-ACA 196126 | || | | | |||| ||| ||| ||| | || || | | ||||| ||| Sbjct 744784 AAATTAAGAAAAGAAGTTGAAATTGCAAAAAGAAACTTATCAGTTGTTCA-CTCAACACA 744842 Query 196127 ATGGTTGAGATTGATTCGTTGTTTGACGGAATTGACTTCTATACAACTATTACCCGTGCA 196186 | |||| ||||| | |||| ||| | |||| | ||| | || | || Sbjct 744843 AA--TTGAAATTGAAGATATAGTTGAAGGACATAACTTTTCAGAAACATTAACAAGAGCC 744900 Query 196187 CGTTTTGAAGAGTTAAACTCTGATTTGTTTAGGAAGTGTATGGAACCTGTTGAACAAGTA 196246 |||||||| ||||| |||||| ||||| | | | ||||||||| || ||||| Sbjct 744901 AAATTTGAAGAATTAAATGATGATTTATTTAGAGAAACTTTAGAACCTGTTAAAAAAGTA 744960 Query 196247 CTTCGTGACGCAAAG-ATGGATAAGTCTAAGGTTGATGAAATTGTCCTTGTGGGAGGATC 196305 | ||| ||||| ||| | || | || | ||||||||||| | || ||||| || Sbjct 744961 TTAGATGATGCAAAATATGAAAAAAGCAAAA-TCGATGAAATTGTTTTAGTAGGAGGTTC 745019 Query 196306 AACCCGTATTCCGAAGATTCAACAGATGCTTTCTAGCTTCTTCAATAATAAAGATTTAAA 196365 ||| ||||| || || |||||||| || || || |||||| |||||| ||| Sbjct 745020 AACTCGTATACCTAAAATTCAACAAATTATTAAAGAGTTTTTCAATGGTAAAGAACCAAA 745079 Query 196366 CAAAACGATCAACCCGGATGAAGCAGTTGCTTATGGTGCGGCCGTTCAGGCTGCTATTCT 196425 | | || ||||| |||||||| || || |||||||| || |||| |||| |||| | Sbjct 745080 TAGAGGTATTAACCCAGATGAAGCCGTAGCATATGGTGCTGCTATTCAAGCTGGTATTAT 745139 Query 196426 CTCAGGTGTTGACAATAATAACGTCCAAGATCTTCTGCTACTTGATGTTGCACCCGTATC 196485 | || || || ||| | |||||| || | | | |||||| | || || | Sbjct 745140 TTTAG-----GAGAAGAAT----TACAAGATGTTGTATTGTTAGATGTTACTCCATTAAC 745190 Query 196486 CCTGGGTCTTGAAACAGCGGGTGGTGTTATGACTAAAATTATTGATAGGAACACAACTAT 196545 | ||| ||||||| | |||||| |||||||| || | ||| | || || ||| ||| Sbjct 745191 TTTAGGTATTGAAACTGTTGGTGGTATTATGACTCAATTAATTAAAAGAAATACAGTTAT 745250 Query 196546 TCCGACTAAGAAGGAACAAGTCTTTTCAACGTATTCCGATAATCAACCAGGTGTTCATAT 196605 ||| || || || |||| ||||||||| ||| ||||| ||||||| |||| || Sbjct 745251 TCCAACAAAAAAATCACAAACCTTTTCAACCTATCAAGATAACCAACCAGCTGTTTTAAT 745310 Query 196606 TCAAGTATATGAAGGAGAACGCTCCCGTGCAAAGGATAACCATCTACTTGGAACTTTCGA 196665 |||||| | |||||||||| | | | || ||||||||| || | |||| || || Sbjct 745311 TCAAGTCTTTGAAGGAGAAAGAGCATTAACTAAAGATAACCATTTATTAGGAAAATTTGA 745370 Query 196666 TTTGACGGGGATTCCAGCTGCACCCAGAGGTGTTCCACAGATTAATGTTTGCTTCGATAT 196725 || | || |||||| |||||| |||||||| || | || | ||| || | | Sbjct 745371 ATTATCTGGTATTCCACCTGCACAAAGAGGTGTACCTAAAATCGAGGTTACATTTACTGT 745430 Query 196726 AGACGCAAATGGAATTCTAAACGTCACAGCTGAGGACAAGGCTTCTGGCAAATCTGAAAA 196785 ||| ||| || ||| || | || ||| || || || | | || ||| | || Sbjct 745431 CGACAAAAACGGTATTTTACATGTTGAAGCAGAAGATAAAGGAACAGGAAAAAGTAAAGG 745490 Query 196786 GATTGTGATTACCAATGACAAGGGGCGGCTTTCTAAGGAGGAAATTGAACGTATGGTTCA 196845 || ||||| |||||||| || | | || || || |||| ||| ||| || | Sbjct 745491 TATAACTATTACTAATGACAAAGGTAGATTATCAAAAGAACAAATAGAAAAAATGATTAA 745550 Query 196846 AGATGCGGAAAA 196857 ||||| ||||| Sbjct 745551 CGATGCTGAAAA 745562 >seq6 Length=916956 Score = 212 bits (234), Expect = 8e-50 Identities = 1034/1619 (64%), Gaps = 42/1619 (3%) Strand=Plus/Plus Query 77951 CCTCAATACTTATTCATGCGTGTTTCTATTGGTATTCATGGAAATGATATTCCAGCGGTA 78010 ||||| | ||||| ||| | || ||||| || || ||| | ||||| || | || Sbjct 507800 CCTCAGCATTTATTAATGAGAGTATCTATAGGAATACATATAGATGATCTTGAAAAGGCT 507859 Query 78011 CTTGAAACGTATGATAAAATGTC-CAATGGTATGTTTATTCACGCAACACCTACTTTGTT 78069 | ||||| ||| || |||||| ||| ||| |||| ||| || || ||||| || || Sbjct 507860 TTAGAAACTTATCATTTAATGTCACAAAAATAT-TTTACTCATGCTACTCCTACATTATT 507918 Query 78070 TAATGCAGGTACTCCCCGTCCACAGATGTCATCTTGTTTCCTACTTGCAAATAAGGAGGA 78129 |||| | || || || | || || ||||| || || || || | ||| || || Sbjct 507919 TAATTCGGGAACACCAAGACCCCAAATGTCTTCATGCTTTTTATTATCAATGAAATCTGA 507978 Query 78130 CTCTATTAATGGTATATACGGGACTCTCACAGAGTGTGCTCAGATTTCTAAGTGGGCTGG 78189 || || | ||||||| | || | | | ||||| |||| ||| || || Sbjct 507979 TTCAATAGAAGGTATATTTGAAACATTAAAGCAATGTGCATTGATTAGTAAAACAGCAGG 508038 Query 78190 TGGTATAGGTCTTCATATTCACGATGTTCGTGCAAACAAGTCCAGGATTAGAGGAACTAA 78249 ||||||||| | | | || ||| || | || | || || || ||||||||||| Sbjct 508039 AGGTATAGGTGTGGCTGTACAAGATATTAGAGCTCAAAATTCTTACATCAGAGGAACTAA 508098 Query 78250 TGGTCAGTCTGATGGAATTATTCCTATGCTTAGGGTATTCAATGCTACAGCACGCTATGT 78309 |||| || |||| | | || ||| | || || || |||| ||||||| | ||||| Sbjct 508099 TGGTATATCAAATGGTTTAGTCCCGATGTTAAGAGTTTTTAATGATACAGCAAGATATGT 508158 Query 78310 CAACCAAGCGGGTCGTA---GGAAGGGGTCATTCGCTATGTACCTTGAACCTTGGCACGC 78366 | |||| || | | | || || || || ||| | || ||||||| ||||| | Sbjct 508159 AGATCAAGGTGGAGGAAAAAGAAAAGGTTCTTTTGCTGTATATGTTGAACCATGGCATTC 508218 Query 78367 CGATGTAATGGATTTTTTGGAACTTCGTCTCAACCAGGGTGACGAGGAAGCTCGATGCAG 78426 ||| | | || ||||| || | | || || ||| | || ||| || | Sbjct 508219 AGATATTTTTGAATTTTTAGATTTAAGAAAAAATCATGGTAAAGAAGAATTGAGAGCTCG 508278 Query 78427 GGATTTATTCACTGCTATGTGGATTCCGGATCTTTTTATGAAGAGAGTTGAGGAAGGAGG 78486 |||||||| |||||| ||| | || ||| | |||||||| ||||| ||||| Sbjct 508279 TGATTTATTTTATGCTATTTGGGTACCTGATTTATTTATGAAAAGAGTAAAGGAAAATAA 508338 Query 78487 TAAATGGTCTCTTTTCTGTCCAGATAAGACTAAGGGTCTTTCAGATGT-ATAC----GGG 78541 || ||| || | | || || ||| | || | | | | || | || || Sbjct 508339 GAACTGGACTTTAATGTGCCC---TAA--CGAATGTCCAGGCTTAAGTGAAACCTGGGGT 508393 Query 78542 GAAGAATTCGAAAAATTGTACACTAAATACGAAGAGGAAGGTCTCGCTATTAAGACAATT 78601 |||||||| |||||||| || || ||||||||||| ||| ||| | | || |||||| Sbjct 508394 GAAGAATTTGAAAAATTATATACAAAATACGAAGAAGAAAATCTTGGAAAAAAAACAATT 508453 Query 78602 GATGCATCTGAACTATGGAAAGCTATTATCAAAAGTCAAACAGAGACCGGCACCCCGTAT 78661 |||| || ||||| ||||| | |||| |||| ||| || || || ||| Sbjct 508454 CTTGCACAAGATTTATGGTTTGCTATATTACAAAGCCAAATAGAAACTGGTGTACCATAT 508513 Query 78662 ATGCTATACAAAGACAGCTGTAACAGAAAGTCTAACCAAAAGAACCTAGGTGTCATCAAA 78721 ||| |||| ||||| ||||| || || || ||||| || |||| || ||| Sbjct 508514 ATGTTATATAAAGATGCATGTAATTCTAAATCGAATCAAAAAAATTTAGGAACAATTAAA 508573 Query 78722 AGCTCTAACCTTTGCACAGAAATTCTGGAATACACGGATAA--GAATGAAACAGCTGTAT 78779 || ||| | || |||||| | ||||| || || | ||||| |||||| | Sbjct 508574 TGCAGTAATTTATGTTGTGAAATTATTGAATATAC--ATCACCTGATGAAGTAGCTGTTT 508631 Query 78780 GTAATCTAGGGTCTATCGCTCTACCAAAGTTTGTTGATCGAGAATTAAAGACATTTGATT 78839 ||||| ||| || || || || || ||||||||| ||||| ||| |||| ||| Sbjct 508632 GTAATTTAGCTTCCATTGCATTATGCAAATTTGTTGATAGAGAAAAAAAAGAATTTAATT 508691 Query 78840 ATTCAAAGCTCCACGAAATTACAAAAATCGTAACTAAAAATTTAAATCGTGTAATTGACC 78899 | ||| | | || ||||| ||||| | |||| ||||||| || | ||||| Sbjct 508692 TTAAAAAATTATATGATATTACTAAAATTATTACTAGAAATTTAGATAAAATTATTGAAA 508751 Query 78900 GTAACTACTACCCAGTCGAGACTGCTAAATATTCTAATATGAAACATAGACCAATTGGTC 78959 | || || || ||||| | || || || |||| | ||||||||| ||||| Sbjct 508752 GAAATTATTATCCAGTTAAAGAAGCGGAAAGATCAAATAAAAGACATAGACCTATTGGAA 508811 Query 78960 TAGGTGTTCAAGGATTGGCAGATGTATTCA-ACTTGTGTGGTCTTCCCTTCGATTGCGAA 79018 |||| || |||||||| |||||| ||| | ||| | | | ||| | || | ||| Sbjct 508812 TAGGAGTACAAGGATTAGCAGATACATTTATGCTTTTAAGAT-ATCCATATGAATCTGAA 508870 Query 79019 GATTC-AAGGACTATGAATGCTCATATTTTCGAGACTATTTATCATGCAGCTTTAGAA-- 79075 || | || || | | ||| || || || ||||| ||| |||| ||||||||| Sbjct 508871 GAAGCTAAAGAAT-TAAATAGAAGAATATTTGAAACTATGTATTATGCTGCTTTAGAAAT 508929 Query 79076 GCAAGTTCAGAACTTGCTGAAATTAATGGGCCTTATGAGAGTTTCGAGGGTTCACCCGCT 79135 | ||| ||| | || || | | ||| || ||||| | | ||| || || Sbjct 508930 GTCTGTT--GAATTGGCACAAGTAAGTGGACCATATGAATCATATCAAGGTAGTCCAGCA 508987 Query 79136 TCACAAGGTCTTCTTCAACCAGATCTATGGGAAGGTGAAGCTAAATACAGTGGTCGTTAC 79195 ||||| | | ||| ||| | | |||| | || || || | | || Sbjct 508988 AGCCAAGGAATATTACAATTTGATATGT-GGAATGCAAAAGTAGAT--AATAAATATTGG 509044 Query 79196 GATTGGGATGCAATGAGAAAGCGTGTAATGACGAAGGGTCTGAGAAACAGTCTTCTCGTA 79255 ||||||||| | | | ||| ||| | | || | ||||| |||||| || Sbjct 509045 GATTGGGATTTATTAAAAAAAAAAATAAGTAAACACGGATTAAGAAATTCTCTTCTTTTA 509104 Query 79256 GCACCAATGCCCACTGCTTCGACGGCTCAGATCCTCGGTAATAATGAGTGTTTTGAACCA 79315 ||||| ||||| || ||||| ||| | || || | || |||||||| | ||||||||| Sbjct 509105 GCACCTATGCCAACAGCTTCAACGTCACAAATTTTAGGAAATAATGAATCCTTTGAACCA 509164 Query 79316 TACACTACAAACATATATCTTCGTCGCACATTAGCTGGTGAATTTGTTGTGGTTAACAAA 79375 || || | ||||| ||| | || ||| ||||||||| |||| ||||| Sbjct 509165 TATACAAGTAACATTTATTACAGACGTGTTTTAAGTGGTGAATTCTTTGTTGTTAATCCT 509224 Query 79376 CATCTTGTT-GAAGAT-TTGAAGA-AGTTAGGTCTTTGGTCAAAAGAGATGA---AAGAC 79429 ||| ||||| ||||| || || || |||||||||| |||| |||| || | Sbjct 509225 CAT-TTGTTAAAAGATCTTTTTGATAG--AGGTCTTTGGGATGAAGATATGAAACAACAA 509281 Query 79430 TTAATGGTCAAAGCCGGAGGGAGTGTGCAAAACATAGTAGAGATACCAGATAATATTAAA 79489 ||||| | | | ||| ||||| ||| | || || ||||| | | | ||| Sbjct 509282 TTAATTGCCCATAATGGA---AGTGTTCAATATATTAGCGAAATACCTAGTGACTTGAAA 509338 Query 79490 AATCTTTATAAGACTGTTTGGGAAATTAGCCAAAAATGTATTATCGACATGGCAGCGGA 79548 | | ||||| || ||||||||||| | |||||| |||||| || ||||| || || Sbjct 509339 GAGTTGTATAAAACCGTTTGGGAAATCAAACAAAAAAATATTATTGATATGGCTGCTGA 509397 Score = 152 bits (168), Expect = 7e-32 Identities = 164/217 (76%), Gaps = 0/217 (0%) Strand=Plus/Plus Query 171860 GTATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGT 171919 ||||||| || || || ||||| | || || ||||| || || || || ||||| | | Sbjct 465963 GTATGCAGATTTTCGTAAAAACTTTAACCGGGAAAACAATTACTCTTGATGTTGAACCAT 466022 Query 171920 CAGACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATC 171979 | || || || || || | ||||| || ||||||||||| ||||| |||||||| |||| Sbjct 466023 CTGATACTATTGAAAATGTTAAAGCTAAAATTCAAGATAAAGAAGGTATTCCACCTGATC 466082 Query 171980 AGCAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACA 172039 | ||| || | ||||| ||||| ||||| | || |||||| | || || ||||||||| Sbjct 466083 AACAAAGATTAATTTTCGCTGGAAAACAATTAGAGGATGGAAGAACACTATCTGATTACA 466142 Query 172040 ACGTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAG 172076 || ||||||| || ||||| ||||| | ||| |||| Sbjct 466143 ACATTCAAAAAGAATCTACCTTACACTTAGTTTTAAG 466179 Score = 152 bits (168), Expect = 7e-32 Identities = 164/217 (76%), Gaps = 0/217 (0%) Strand=Plus/Plus Query 171860 GTATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGT 171919 ||||||| || || || ||||| | || || ||||| ||||| || || |||||| | | Sbjct 466191 GTATGCAGATTTTCGTAAAAACTTTAACCGGGAAAACAATCACTCTTGATGTTGAGCCAT 466250 Query 171920 CAGACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATC 171979 | || || || || || | ||||| || ||||||||||| ||||| ||||| || |||| Sbjct 466251 CTGATACCATTGAAAATGTTAAAGCTAAAATTCAAGATAAAGAAGGTATTCCTCCTGATC 466310 Query 171980 AGCAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACA 172039 | ||| || | |||||||| || ||||| | |||||||| | || || |||| |||| Sbjct 466311 AACAAAGATTAATTTTTGCCGGAAAACAATTAGAAGATGGTAGAACACTATCTGACTACA 466370 Query 172040 ACGTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAG 172076 || ||||||| || || ||| ||||| | ||| |||| Sbjct 466371 ACATTCAAAAAGAATCGACTTTACACTTAGTTTTAAG 466407 Score = 149 bits (164), Expect = 8e-31 Identities = 163/217 (75%), Gaps = 0/217 (0%) Strand=Plus/Plus Query 171860 GTATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGT 171919 |||||||||| || || ||||| | || |||||||| || || || || ||||| | | Sbjct 466419 GTATGCAAATTTTCGTAAAAACATTAACCGGAAAAACAATTACTCTTGATGTTGAACCAT 466478 Query 171920 CAGACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATC 171979 |||| || || || ||| | |||||||| ||||||||||| ||||| || ||||| |||| Sbjct 466479 CAGATACTATTGAAAACGTTAAAGCCAAAATTCAAGATAAAGAAGGTATCCCACCTGATC 466538 Query 171980 AGCAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACA 172039 | ||| || | ||||| ||||| ||||| | ||||| || | || | |||| || | Sbjct 466539 AACAAAGATTAATTTTCGCTGGAAAACAATTAGAAGACGGTAGAACATTATCTGACTATA 466598 Query 172040 ACGTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAG 172076 || ||||||| || ||||| |||| | ||| |||| Sbjct 466599 ACATTCAAAAAGAATCTACCTTACATTTAGTTTTAAG 466635 Score = 141 bits (156), Expect = 1e-28 Identities = 144/188 (77%), Gaps = 0/188 (0%) Strand=Plus/Plus Query 171889 GGAAAAACTATCACCCTCGAGGTTGAGTCGTCAGACACAATCGATAACATCAAAGCCAAG 171948 ||||||||||| ||||| || |||||| | || || || || || || | ||||| || Sbjct 465764 GGAAAAACTATAACCCTTGATGTTGAGCCATCCGATACCATTGAAAATGTTAAAGCTAAA 465823 Query 171949 ATTCAAGATAAGGAAGGCATTCCACCCGATCAGCAACGACTTATTTTTGCTGGTAAACAG 172008 ||||||||||| ||||| || ||||| ||||| ||| || | ||||||||||| || || Sbjct 465824 ATTCAAGATAAAGAAGGTATCCCACCTGATCAACAAAGATTAATTTTTGCTGGAAAGCAA 465883 Query 172009 CTTGAAGATGGACGTACCCTCGCTGATTACAACGTTCAAAAGGAGTCTACTCTACACCTT 172068 | ||||||||| | || | |||| || ||| ||||||| || ||||| ||||| | Sbjct 465884 TTAGAAGATGGAAGAACATTATCTGACTATAACATTCAAAAAGAATCTACCTTACACTTA 465943 Query 172069 GTTCTAAG 172076 ||| |||| Sbjct 465944 GTTTTAAG 465951 >seq11 Length=1720574 Score = 150 bits (166), Expect = 2e-31 Identities = 155/203 (76%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 |||||||||||||| ||||| | || |||||||| ||||| || || ||||| | || Sbjct 1496631 ATGCAAATCTTTGTAAAAACATTAACCGGAAAAACAATCACTCTTGATGTTGAACCATCT 1496572 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981 || ||||| || || | ||||| || || |||||||| ||||| ||||| || ||||| Sbjct 1496571 GATACAATTGAAAATGTTAAAGCAAAAATCCAAGATAAAGAAGGAATTCCCCCTGATCAA 1496512 Query 171982 CAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAAC 172041 ||| || | ||||| ||||| ||||| | ||||||||| | || | |||| || ||| Sbjct 1496511 CAAAGATTAATTTTCGCTGGAAAACAATTAGAAGATGGAAGAACATTATCTGACTATAAC 1496452 Query 172042 GTTCAAAAGGAGTCTACTCTACA 172064 ||||||| ||||| || |||| Sbjct 1496451 ATTCAAAAAGAGTCAACCTTACA 1496429 >seq9 Length=1345096 Score = 125 bits (138), Expect = 9e-24 Identities = 233/333 (70%), Gaps = 18/333 (5%) Strand=Plus/Plus Query 195662 AAGATGAAGGAGACTGCGGAATCTTTCATGGGTAAAACTGTGAAAGATGCAGTTGTGACT 195721 || ||||| || ||||| ||| || | | || | || || | | |||||| | ||| Sbjct 1073440 AAAATGAAAGAAACTGCTGAAAATTACTTAGGAAGAAAAGTACATCAAGCAGTTATTACT 1073499 Query 195722 GTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCTGCTGCTATTGCG 195781 |||||||| || || | |||||||||| | || || ||||| || |||| | ||||| Sbjct 1073500 GTACCTGCATATTTTAATGATTCACAAAGGCAAGCCACAAAAGATGCTGGTAAAATTGCA 1073559 Query 195782 GGTCTAAACTGTCTT-AGAATTATCAATGAACCAACAGCGGCTGCAATTGCTTATGGTCT 195840 |||||| | ||| || |||||||| ||||||||||| || ||||| | |||| |||| | Sbjct 1073560 GGTCTAGA-TGTTTTAAGAATTATTAATGAACCAACTGCAGCTGCTTTAGCTTTTGGTTT 1073618 Query 195841 GGACAAGAACAAGGACGAAGATAAAAATGT-ATTGATCTT--TGATCTCGGTGGTGGTAC 195897 || || ||| || | |||| || || | | || ||| | || || ||||| Sbjct 1073619 AGA----AAAAAG--TGATGGTAAA---GTCATAGCTGTTTATGACTTAGGAGGAGGTAC 1073669 Query 195898 GTTTGATGTCTCACTTCT--CAATATTGAAGGTGGTATATTCGAAGTAAAGGCTACTGCT 195955 |||||||| ||| || | |||||| ||| ||| | || || ||||| || || | Sbjct 1073670 ATTTGATGTTTCAATTTTAGAAATATT--AGGAGGTGTTTTTGAGGTAAAAGCCACAAAT 1073727 Query 195956 GGTGATACTCATCTAGGTGGTGAAGATTTCGAT 195988 || |||| | |||| || |||||||| ||| Sbjct 1073728 GGAAATACCTCTTTAGGAGGAGAAGATTTTGAT 1073760 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 657862079292080