Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmodium_20coatneyi_20[genbank_20GCA_5F000725905.1_202014-07-21] 158 sequences; 27,817,468 total letters Query= NC_002520.1 Length=232392 Score E Sequences producing significant alignments: (Bits) Value seq5 98.7 1e-15 >seq5 Length=2463301 Score = 98.7 bits (108), Expect = 1e-15 Identities = 104/137 (76%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAA 146110 ||||||| | | ||| ||||| ||||| || ||||| || || || || || || Sbjct 610995 CCACCTCGTAAACGTAAGACCAAGTGTAACGTGGATTCCTTTTGGATGTTGTAGTCAGAC 610936 Query 146111 AGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGA 146170 | ||||| | ||| ||||||||||| ||||||||||| | |||||||||||| || || Sbjct 610935 AAGGTTCTTCCATCCTCTAATTGTTTGCCAGCAAAAATGAGTCTTTGCTGATCAGGGGGG 610876 Query 146171 ATTCCTTCTTTATCTTG 146187 ||||| ||||| || || Sbjct 610875 ATTCCCTCTTTGTCCTG 610859 Score = 89.7 bits (98), Expect = 8e-13 Identities = 102/137 (74%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAA 146110 |||||||| || | || ||| || ||||| |||||||| || || || || || || Sbjct 610767 CCACCTCTGAGACGTAGTACTAAGTGTAATGTAGATTCCTTTTGGATGTTGTAGTCAGAC 610708 Query 146111 AGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGA 146170 | ||||| | ||| || |||||||| ||||||||||| | ||| || || || || || Sbjct 610707 AAGGTTCTTCCATCTTCCAATTGTTTGCCAGCAAAAATGAGTCTCTGTTGGTCAGGTGGG 610648 Query 146171 ATTCCTTCTTTATCTTG 146187 ||||| ||||| || || Sbjct 610647 ATTCCCTCTTTGTCCTG 610631 Score = 89.7 bits (98), Expect = 8e-13 Identities = 102/137 (74%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAA 146110 |||||||| || | || ||| || ||||| || ||||| || || ||||| || || Sbjct 611223 CCACCTCTCAGACGTAGTACTAAGTGTAAGGTGGATTCCTTTTGGATGTTATAGTCAGAC 611164 Query 146111 AGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGA 146170 | ||||| | ||| || |||||||| ||||||||||| | ||| || || || || || Sbjct 611163 AAGGTTCTTCCATCTTCCAATTGTTTGCCAGCAAAAATAAGTCTCTGTTGGTCAGGTGGG 611104 Query 146171 ATTCCTTCTTTATCTTG 146187 ||||| ||||| || || Sbjct 611103 ATTCCCTCTTTGTCCTG 611087 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 743524931535360