Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmodium_20coatneyi_20[genbank_20GCA_5F000725905.1_202014-07-21] 158 sequences; 27,817,468 total letters Query= NC_003094.2 Length=130759 Score E Sequences producing significant alignments: (Bits) Value seq62 89.7 4e-13 >seq62 Length=53519 Score = 89.7 bits (98), Expect = 4e-13 Identities = 145/206 (70%), Gaps = 2/206 (1%) Strand=Plus/Minus Query 24824 TTAACATCATGCAGATATTTGTTAAAACCTTAACCGGCAAAACGATAACCGTCGATGTCG 24883 ||| || ||||||||||| || ||||| |||||||| ||||| || ||| | ||||| | Sbjct 26494 TTACCAAAATGCAGATATTCGTAAAAACATTAACCGGAAAAACCATCACCCTGGATGTGG 26435 Query 24884 AATCGAGCGACA-GTGTAGAAACTGTTAAGGAAAAAATTGCTGCAAAAGAAGGCGTACCG 24942 | | ||| | | ||| || ||||||| |||||||| | || ||||| | || Sbjct 26434 AGGCATCCGAAACGATTAGGAA-TGTTAAGTCAAAAATTGAGGATAAGGAAGGAATCCCA 26376 Query 24943 GTTGACCAGCAACGTTTAATATATGCGGGCAAACAACTGGAAGATTCCATGACTATGAAC 25002 ||||||||| | |||||||| | || || || |||| ||| || | | || Sbjct 26375 CCTGACCAGCAGAGGCTAATATATTCAGGAAAGCAGTTGGAGGATGTCAGGTTTGTGGCT 26316 Query 25003 GATTACAGCATACAGAAAGAGGCCAC 25028 || |||| ||| ||||| ||| |||| Sbjct 26315 GACTACAACATCCAGAAGGAGTCCAC 26290 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 418303194503360