Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmodium_20coatneyi_20[genbank_20GCA_5F000725905.1_202014-07-21] 158 sequences; 27,817,468 total letters Query= NC_006966.1 Length=166259 Score E Sequences producing significant alignments: (Bits) Value seq5 91.5 2e-13 >seq5 Length=2463301 Score = 91.5 bits (100), Expect = 2e-13 Identities = 161/232 (69%), Gaps = 2/232 (1%) Strand=Plus/Minus Query 21767 CTATACATTTCAGAATGTATATTTTCTATCGCTATCTGAAATCCGTAAAAACATCTTGCC 21826 |||||| | || || || |||||||| | || ||||| || |||||| ||||| Sbjct 2269894 CTATACGTCTCTGAGTGGATATTTTCAACAGCAATCTGGAAGGAGTAAAATTTCTTTGCC 2269835 Query 21827 TCTGAACATTGAACCTCG-GAATAAAATCGTTGAGCCAAGTTTTCATTTACTATTCCATC 21885 || | | ||| || | | | | ||| | | | || || ||||| || |||||||| Sbjct 2269834 TCCGTAATTTGCACTTGGCGTAAAAATTTGCTT-GCTAAATTTTCCAACACAATTCCATC 2269776 Query 21886 ACTGGCGGCAAAAAATGCCAATATATTTTTTATAAAATATCGTTCGTTATCTGTTAATTT 21945 ||| || || || || ||||| | || |||||| |||| | ||| || || ||||||| Sbjct 2269775 ACTCGCTGCGAAGAAAGCCAACACATGTTTTATGAAATGTTTTTCATTTTCATTTAATTT 2269716 Query 21946 TTTCCAATCTAATAAATCTTTTGATAAATCTACTTCTTCAGTTGTCCAAAAG 21997 || ||||| ||||| | || || || | |||||||| |||||| ||| Sbjct 2269715 TTCGAAATCTTTCAAATCGCTAGACAAGTCAATTTCTTCAGCTGTCCAGAAG 2269664 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 531899749495920