Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmodium_20coatneyi_20[genbank_20GCA_5F000725905.1_202014-07-21] 158 sequences; 27,817,468 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq5 84.2 2e-11 >seq5 Length=2463301 Score = 84.2 bits (92), Expect = 2e-11 Identities = 157/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || |||| | ||| | ||||| |||| | || |||||||| ||||||||||| | Sbjct 610767 CCACCTCTGAGACGTAGTACTAAGTGTAATGTAGATTCCTTTTGGATGTTGTAGTCAGAC 610708 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | || | || || | |||||| || | | | || || | ||||||||| || || Sbjct 610707 AAGGTTCTTCCATCTTCCAATTGTTTGCCAGCAAAAATGAGTCTCTGTTGGTCAGGTGGG 610648 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTG-TTTTAATTGTTCCACGGTGTCGGTCGACTCCAC 138566 || || |||||||| ||| |||| | || | | ||| | ||||||| |||||||| Sbjct 610647 ATTCCCTCTTTGTC-CTGAATTTTGGCCTTCACATTTTCAATCGTGTCGGATGACTCCAC 610589 Query 138567 CTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 || | || | || || || || ||||| || || ||||| ||||| Sbjct 610588 GTCCAAAGTGATAGTCTTTCCCGTTAGAGTCTTCACGAAAATTTGCAT 610541 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496261419881760