Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmodium_20coatneyi_20[genbank_20GCA_5F000725905.1_202014-07-21] 158 sequences; 27,817,468 total letters Query= NC_014649.1 Length=1181549 Score E Sequences producing significant alignments: (Bits) Value seq10 434 8e-116 seq12 208 6e-48 seq14 118 8e-21 seq6 96.9 3e-14 >seq10 Length=1594295 Score = 434 bits (480), Expect = 8e-116 Identities = 1079/1614 (67%), Gaps = 48/1614 (3%) Strand=Plus/Plus Query 517131 TTTTCTTGTTATCTGCTTCTTCAAATTCTTTAGCTTCTCTAATCATTCTCTCAATTTGAT 517190 ||||||| |||| || ||| | | || ||| || | | ||| | ||||||| | Sbjct 564377 TTTTCTTC--ATCTTCTGCTTTGTACTTTTCAGCGTCGTTCACCATACGGTCAATTTCTT 564434 Query 517191 CTTCAGAGAATCTTCCGCGATTATTAGTAATAGTAATATTCTTGGATTTGTTT----GTT 517246 || || |||||||| | ||| ||||| ||||||| || | ||||| || Sbjct 564435 CTGGGGACAATCTTCCCTTGTCATTGGTAATGGTAATAT----GGTTCTGTTTTCCCGTG 564490 Query 517247 GATTTATCAGCGGCAGTCACATTAAGAATACCATTGGCATCCAAATCAAATGTGACTTCA 517306 ||||| ||| | ||||| |||||||| |||||||| ||||| | |||||| || |||||| Sbjct 564491 GATTTTTCAACAGCAGTAACATTAAGGATACCATTAGCATCAATATCAAAGGTAACTTCA 564550 Query 517307 ATTTGAGGGACCCCTCTCTGAGCAGGTGGGATCCCTTCCAAATTAAATGTTCCCAGATTA 517366 ||||| ||||| |||| | || |||||||| || || | | |||| | |||| Sbjct 564551 ATTTGTGGGACTTTTCTCGGTGCTGGTGGGATACCGTCTAGGTGAAATTTACCCAACAAG 564610 Query 517367 TTATTATCTTTAGTGAATTTTCGTTCACCCTCGAAAATTTGGATAGTAACTACAGTTTGA 517426 || || || ||||| | || || || ||| | | |||||| ||| | | ||| Sbjct 564611 TTGTTGTCCTTAGTTAGGGCTCTCTCTCCTTCGTACACTTGGATCAACACTCCTGGTTGG 564670 Query 517427 TTATCTGAATAAGTTGTAAATACTCTGGATTTT-TTACAAGGAATTGTTGTGTTTCTATC 517485 ||||| | ||| || || || | | || | || || || || || || ||||| || Sbjct 564671 TTATCAGCATAGGTAGTGAAGATT-TGACTCTTCTTTGCTGGGATGGTGGTATTTCTCTC 564729 Query 517486 AATAATATTGGTCATAATACCACCTGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATC 517545 ||| | |||||||||| || ||||| ||||| ||||| || || | | | ||||| Sbjct 564730 AATCAGCTTGGTCATAACTCCTCCTGCGGTTTCCAAACCGAGGGATAAGGAACACACATC 564789 Query 517546 AACTAGGACAATATTTTGAA--GTTTTTCATCAGTTTGACCA-ACAAGAATAGCTGCTTG 517602 | || | | || ||| | | || || || |||| |||| ||| |||||||| Sbjct 564790 TAAGAGCAACAAATCTTGTACCGCATTGGATTGGTC--ACCAGACAA-AATGGCTGCTTG 564846 Query 517603 AATAGCAGCACCATATGCAACAGCTTCATCAGGATTAACAGTTTCATTTAGTTTT--TTA 517660 | || |||||||| ||||| ||||||||||| || | | | | || || || Sbjct 564847 TACTGCTGCACCATACGCAACGGCTTCATCAGGGTTGATGGATC--TGCAGGCTTCCTTT 564904 Query 517661 CCATTGAAAAAATTTGAAAGAAGTTGTCTTACCTTAGGAATACGAGATGATCCTCCAACT 517720 || || || || | || ||| | | || ||||| | | || || ||||| Sbjct 564905 CCGTTAAAGAACTCCTTAATGAGTGTTTGAATTTTGGGAATTCTTGTGGAACCACCAACA 564964 Query 517721 AATACAATTTCATGCAC-CTGTGATTTATCCAGTTTTGAATCCAATAAAACTTTTTCAAC 517779 | |||| ||| ||||| || | || |||| | | ||| || || || ||||| Sbjct 564965 AGGACAACTTCGTGCACGCTCTTCTTG-TCCATCATGGCATCTTTCAATACCTTCTCAAC 565023 Query 517780 GGGTTCAAGACCCGCTCTAAACAAGTCTGAACAAAGTTCTTCGAATTTAGCTCTAGTAAG 517839 || || | | || | || ||| ||||| || ||| | |||||| | | Sbjct 565024 AGGAATTAGCGTATCACGGAAGTAATCGATACAGAGTTCCTCAAATCTGGCTCTACTCAC 565083 Query 517840 AGTGACATTATAATCAATTCCTTCGAACAAAGAATCAACTTCAATCGTAGTTTGAGTCGA 517899 || ||| | || || || |||||||| | || |||| ||| || || | ||| || || Sbjct 565084 CGTCACACTGTAGTCGATACCTTCGAAAAGGGAGTCAATTTCGATGGTGGCTTGTGTAGA 565143 Query 517900 AGAAGATAGTGCACGTTTAGCACGTTCACATGCTGTCCTTAGTCTTCGTAAGGCTTTTGC 517959 || |||| | ||| || || | |||||| || | || ||||| ||||||| | || Sbjct 565144 GGAGGATAAGGTACGCTTGGCTCTCTCACATTGAGTTCGTAATCTTCTTAAGGCTCT-GC 565202 Query 517960 TGATT----GATTCAAATCTGTTT---TATATTTTCTCTTGAAATCTTCAACACACCATG 518012 | ||| ||| ||||| || ||| |||||| || |||||||||||||| | Sbjct 565203 T-ATTCTTAGAT--AAATCCTTTCCTCTATTTTTTCTTTTAAAATCTTCAACACAAAAGT 565259 Query 518013 TTACAAGACGATTATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTA 518072 | || | | || ||||||||||||||||| || | |||| ||| | || || | | Sbjct 565260 TCACCAACCTGTTGTCAAAATCTTCACCTCCTAAGTGCGTATCTCCAGCTGTGGCCTTCA 565319 Query 518073 CTTGGAAAAGTCCATCTTCAAGAGACAAAAGAGTTACATCATGGGTTCCACCACCCATAT 518132 ||| ||||| |||||| |||| | | || | |||||| ||||| || || | | Sbjct 565320 CTTCGAAAATTCCATCCTCAATCGTTAGGAGGGATACATCGAAAGTTCCTCCTCCGAGGT 565379 Query 518133 CAAAAATAAGTACATTCATTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAG 518192 | ||||| || | ||| |||| | | ||||| | |||||||| |||| ||||| Sbjct 565380 CGAAAATGAGGATGTTCTTTTCACCCTTTCCTTTTTTGTGCAGACCATAAGCAATAGCAG 565439 Query 518193 CAGCAGTTGGTTCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTT 518252 | |||||||| || || |||||||||| ||||| | ||||||||| | ||||| || | Sbjct 565440 CTGCAGTTGGCTCGTTGATAATTCTCATGACATTCAAACCAGCAATAGTACCTGCGTCCT 565499 Query 518253 TAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCAGTTA 518312 | |||||||| ||||||||||| |||||||| || || || ||||| || |||| ||| Sbjct 565500 TCGTGGCTTGCCTTTGTGAATCATTAAAATAAGCTGGCACGGTAATGACTGCATTTTTTA 565559 Query 518313 CTTCTTTACCAATATAAGCGCT--TGCCGTTTGTTTCATTTTACTTAAAATCATTGATGA 518370 || || || || |||| ||| ||| |||||| || |||| ||| || || Sbjct 565560 TGGACTTTCC--TAAAAACGCTTCTGCATTTTCTTTCATCTTTTGCAAAACCATGGAAGA 565617 Query 518371 AATTTGTTCTGG--GGAAT-ATTGCTTGGATTCATTTTGATATGATACTTCAAAATATGG 518427 |||| ||| || ||||| ||| ||| || ||||| ||||| |||| || Sbjct 565618 GATTTCTTCAGGGTGGAATAATTTCTT---CTCTCCCTGATAGGATACCTCAATCATGGG 565674 Query 518428 TTTATTACCAACA---TTAATAACTTTAAATGGCCAGTATTTCATATCTGATTGAACACT 518484 || | | ||||| | || |||||||||||| ||||||||| || ||| Sbjct 565675 CTTCTCATCAACACCGGACTTGACAGTAAATGGCCAGTGTTTCATATCGCTCTGCACAGA 565734 Query 518485 TTGGTCATTAAAATCTCTACCAATTAATCGTTTTGCATCAAAAATAGTATTGGTTGGATT 518544 ||| | || | || |||||||| | ||||||||||||| ||| || ||| || Sbjct 565735 AGATTCAGTGAACTTCCTTCCAATTAACCTCTTTGCATCAAAAACAGTGTTCTCTGGGTT 565794 Query 518545 AATTGCAGCTTGATATTTGGCTGCATCTCCAATCAGATGTTCTGTCTCTGTAAATGAAAC 518604 |||| |||| | || || ||||||||||| || || || || || || | ||| Sbjct 565795 CCTTGCCACTTGGTTCTTAGCGGCATCTCCAATTAGCCTCTCCGTGTCAGTGAAGGCAAC 565854 Query 518605 ATATGATGGAGTTGTGCGATTACCTTGATCATTCGCAATAATTTCAACTTTACCATTTTG 518664 || |||||||| || | || || || ||||| ||||| || || || || | ||| Sbjct 565855 GTAAGATGGAGTGGTTCTGTTTCCCTGGTCATTGGCAATGATATCTACATTTTCGTTTCT 565914 Query 518665 CCATACACCTACACAACTAAAAGTTGTTCCTAAATCAATACCAATAGCAATTTT 518718 |||||| || || || | | || || || | |||||||| || || || || Sbjct 565915 CCATACTCCGACGCAGGAATAGGTGGTACCAAGGTCAATACCGATGGCGATGTT 565968 >seq12 Length=1585989 Score = 208 bits (230), Expect = 6e-48 Identities = 1034/1602 (65%), Gaps = 71/1602 (4%) Strand=Plus/Minus Query 517136 TTGTTATCTGCTTCTTCAAATTCTTTAGCTTCTCTAATCATTCTCTCAATTTGATCTTCA 517195 || ||||| | || |||||| || || || |||||||| | || ||||| |||| Sbjct 745907 TTCTTATCCTCATCGGCAAATTTTTCTGCATCGTTAATCATTTTTTCGATTTGTTCTTTG 745848 Query 517196 GAGAATCTTCCGCGATTATTAGTAATAGTAATATTCTTGGATTTGTTTGTTGATTTATCA 517255 || | |||||| || ||| ||||| ||||| ||| ||| ||| |||||| Sbjct 745847 GACAGTCTTCCTTTATCATTGGTAATTGTAATTCCCTTACTTTTTCCTGTACCTTTATCT 745788 Query 517256 GCGGCAGTCACATTAAGAATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGG 517315 | || || | || |||||||| ||| | || || |||||||||| ||| Sbjct 745787 TCCGCTTCTACGTGGAGGATACCATTTTTATCTACTGTGAAGGTCACTTCAATTTTGGGG 745728 Query 517316 ACCCCTCTCTGAGCAGGTGGGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATCT 517375 || |||||||| || |||||||| ||| | | ||| |||| | | | ||||| Sbjct 745727 ACACCTCTCTGTGCTGGTGGGATTCCTGAAAGTTCGAATTTTCCTAAAAGGTGGTTATCC 745668 Query 517376 TTAGTGAATTTTCGTTCACCCTCGAAAATTTGGATAGTAACTACAGTT---TGATTATCT 517432 || || ||| || |||||| || |||| |||||| |||| |||| | || || ||| Sbjct 745667 TTGGTTAATGCTCTTTCACCTTCAAAAACTTGGAT--TAAC-ACAGCTGGTTGGTTGTCT 745611 Query 517433 GAATAAGTTGTAAATACTCTG-GATTTTTTACAAGGAATTGTTGTGTTTCTATCAATAAT 517491 || || | ||| |||| || || || ||||| ||| ||||| | ||| | Sbjct 745610 TGGTAGGTAGAAAAGG-TCTGTGACTTCTTCGTTGGAATAACTGTATTTCTTTTAATCAG 745552 Query 517492 ATTGGTCATAATACCACCTGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAG 517551 | |||||| ||||| || | ||||||| ||| | | || ||||| ||||| | || Sbjct 745551 TTGGGTCATGATACCTCCAACGGTTTCTATACCTAAGGTTAGTGGAGTAACATCTAGCAG 745492 Query 517552 GACAATATTTTGAAGTTTTTCATCAGTTTGACCAACAAGAATAGCTGCTTGAATAGCAGC 517611 || | || ||| | || ||| || |||| || ||| | || ||||| ||||| Sbjct 745491 AACCACATCTTGCAATTCTTC-TC-------CCAA-AATAATTCCCGCCTGAATGGCAGC 745441 Query 517612 ACCATATGCAACAGCTTCATCAGGATTAACAGTTTCATTTAGTTTTTTACCATTGAAAAA 517671 ||| ||||| || |||||||| || |||| | | |||| ||| |||||| |||||||| Sbjct 745440 ACCGTATGCTACTGCTTCATCTGGGTTAATACCTCTATTTGGTTCTTTACCGTTGAAAAA 745381 Query 517672 ATTTGAAAGAAGTTGTCTTACCTTAGGAATACGAGATGATCCTCCAACTAATACAATTTC 517731 | | | || |||| | || || ||||||| |||||||| |||| || ||||| Sbjct 745380 TTCTTTTATAATTTGTTGAATTTTGGGGATACGAGTAGATCCTCCTACTAGAACGATTTC 745321 Query 517732 ATGCACCTGTGATTTATCCAG-TTTTGAATCCAATAAAACTTTTTCAACGGGTTCAAGAC 517790 || | | || | | | || ||||| || || || || | |||||||| | | Sbjct 745320 ATCGATTT-TGCTCTTTTCATATTTTGCGTCATCTAGTACCTTCTTTACGGGTTCTAAAG 745262 Query 517791 CCGCTCTAAACAAGTCTGAACAAAGTTCTTCGAATTTAGCTCTAGTAAGAGTGACATTAT 517850 ||||||| ||||| | | |||||| || || ||||| || | || || | Sbjct 745261 TTTCTCTAAATAAGTCATCATTCAATTCTTCAAACTTGGCTCTCGTCAAGGTCTCAG-AG 745203 Query 517851 AATCAAT-TCCTTCGAACAAAGAATCAACTTCAATCGTAGTTTGAGTCGAAGA-AGATAG 517908 || | || |||||| | | |||| |||||| || |||| | | ||||| Sbjct 745202 AAACTATGTCCTTCTACGATGTCTTCAATCTCAATCTGTGTA-GAGTGCACTACAGATAA 745144 Query 517909 TGCACGTTTAGCACGTTC-ACATGCTGTCCTTAGTCTTCGTAAGGCTTTTGCTGATT-GA 517966 | || ||| ||| || | || || | | | || | | |||| | || || || Sbjct 745143 ATTTCTCTTTGCAATTTCGACTTCCTTTCTTAACTTTTGG-ATGGCTCT--CTTATCAGA 745087 Query 517967 T-TCAAATCTGTTTTATATTTTCT-CTTGAAATCTTCAACACACCATGTTACAAGACGAT 518024 | | |||||| | || | | |||| ||| ||| || | | | || | || || | Sbjct 745086 TCTTAAATCTATGTT-TGTCTTCTTCTTAAAAATTTTGATAAA--ATAATCCATAACTCT 745030 Query 518025 T--ATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAG 518082 | ||| || || || ||||| || | |||||||||| ||| || || | || | Sbjct 745029 TTGATCGAAGTCCTCTCCTCCTAAATGGGTATTTCCTGCCGTGGCGTAAACCTCAAACAC 744970 Query 518083 TCCATCTTCAAGAGAC-AAAAGAGTTACATCATGGGTTCCACCACCCATATCAAAAATAA 518141 |||| || | ||| |||| | ||||| ||||| || || | ||| | | | Sbjct 744969 ACCATTGTCGAT-GACTAAAATGGACACATCGAAAGTTCCTCCTCCTAAATCGTAGACCA 744911 Query 518142 GTACATTCATTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTG 518201 | || | ||| ||| || || || | ||| || || ||||| || ||||||| Sbjct 744910 --AAATGCTCGTCT----CTTCCTTCTTGTCCAAACCGTAAGCCAAAGCTGCTGCAGTTG 744857 Query 518202 GTTCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTT 518261 ||||||| ||||| | | || || | ||| ||||| ||||||| || || || |||| Sbjct 744856 GTTCATTTATAATACGAACAATGTTTAAACCTGCAATGGTTCCTGCGTCCTTTGTTGCTT 744797 Query 518262 GTCTTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCAGTTACT-TCTTTA 518320 |||| |||| ||| || || || || || || || | ||| || | | ||| |||| Sbjct 744796 GTCTCTGTGCATCATTGAAGTAGGCTGGTACTGTTACAACTGCGTTTTTAACTGGCTTTC 744737 Query 518321 CCAATATAAGCGCTT--GCCGTTTGTTTCATTTTACTTAAAATCATTGATGAAATTTGTT 518378 |||| || | || || ||| ||||||||| |||| ||| | ||||||| Sbjct 744736 CCAA---AAAGGATTGAGCTATTTCTTTCATTTTTTCCAAAACCATGGCACTGATTTGTT 744680 Query 518379 CTGGGGAATATTGCTTGGATTCAT---TTTGATATGATACTTCAAAATATGG-TTTATTA 518434 |||| | | | | | | ||| | || || || |||| | || ||| ||| | Sbjct 744679 CTGGCGCAAA--GGTCGTCTTCTTATCCTTTATCTG-TACTCTTATATTTGGCTTTCCTT 744623 Query 518435 CCAACATTAATAACTTTAAATGGCCAGTATTTCATATCTGATTGAACACTT--TGGTCAT 518492 || || | || || ||||| | | || ||||| || | |||| ||||| | Sbjct 744622 CC-TGGTTTACAATTTCGTATGGCAATAAAGTCCTATCT--TTCACAACTTCCTGGTCGT 744566 Query 518493 TAAAATCTCTACCAATTAATCGTTTTGCATCAAAAATAGTATTGGTTGGATTAATTGCAG 518552 ||| | ||| || || |||||||| |||| || | || | || || | | | | Sbjct 744565 CAAACTTTCTTCCTATCAATCGTTTCACATCGAATACTGTCTGTGTGGGGTGTAGGGTGG 744506 Query 518553 CTTGATATTTGGCTGCATCTCCAATCAGATGTTCTGTCTCTGT----AAATGAAACATAT 518608 ||| |||| ||||| ||||| | | | || |||| || ||||| ||||| Sbjct 744505 CTTCCAATTTAGCTGCTTCTCCCA----CTTTCCTTTCTCCGTCCACGAATGACACATAG 744450 Query 518609 GATGGAGTTGTGCGATTACCTTGATCATT-CGCAATAATTTCAACTTTACCATTTTGCCA 518667 ||||| || | || || || ||||| |||| ||||| ||| | ||||||| | Sbjct 744449 GATGGCGTGATACGGTTTCCCAACTCATTGTTCAAT-ATTTCGACTCTGCCATTTTTGAA 744391 Query 518668 TACACCTACACAACTAAAAGTTGTTCCTAAATCAATACCAAT 518709 ||||| || ||||| |||| || ||||| ||||| || || Sbjct 744390 AACACCAACGCAACTGTAAGTCGTACCTAAGTCAATTCCGAT 744349 Score = 104 bits (114), Expect = 2e-16 Identities = 111/147 (76%), Gaps = 0/147 (0%) Strand=Plus/Minus Query 322241 AAACCGTATGCAAGAGCTGCTGCAGTTGGTTCATTAATTATTTTAAGAACATCTAAACCC 322300 |||||||| || | ||||||||||||||||||||| || || || || | |||||| Sbjct 744884 AAACCGTAAGCCAAAGCTGCTGCAGTTGGTTCATTTATAATACGAACAATGTTTAAACCT 744825 Query 322301 GCAATTTTAGCAGAATCAAGAGTTGCTTGTCTCTGTGCGTCATTAAAATATGCTGGTACA 322360 ||||| | | | || ||||||||||||||||| ||||| || || |||||||| Sbjct 744824 GCAATGGTTCCTGCGTCCTTTGTTGCTTGTCTCTGTGCATCATTGAAGTAGGCTGGTACT 744765 Query 322361 GTAATAACTGCTTTATTAATAGGTTTT 322387 || | |||||| || |||| || ||| Sbjct 744764 GTTACAACTGCGTTTTTAACTGGCTTT 744738 >seq14 Length=2283415 Score = 118 bits (130), Expect = 8e-21 Identities = 134/177 (76%), Gaps = 2/177 (1%) Strand=Plus/Minus Query 518177 CCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATTAAGACCAGCA 518236 ||| | || ||||| || || ||||| || |||||||||| | |||| | ||| ||| Sbjct 1528668 CCAAATGCTAAAGCCGCTGCGGTTGGCTCGTTAATAATTCGAAGCACATCCAAACCTGCA 1528609 Query 518237 ATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCAGGAACAGTA 518296 ||| ||||||| || || |||||||| ||||||||||| |||||||| ||||| || || Sbjct 1528608 ATTTTTCCTGCGTCCTTCGTGGCTTGCCTTTGTGAATCATTAAAATAAGCAGGTACTGTG 1528549 Query 518297 ATAACGGCATCAGTTAC-TTCTTTACCAATATAAGCGCTTGCCGTTTGTTTCATTTT 518352 ||||| || | | ||| ||| || |||| |||| || |||| ||||||||| Sbjct 1528548 ATAACAGCTTGATGTACTTTCCTTCCCAA-ATAATTCTCAGCTGTTTCTTTCATTTT 1528493 Score = 96.9 bits (106), Expect = 3e-14 Identities = 248/376 (66%), Gaps = 14/376 (4%) Strand=Plus/Minus Query 517268 TTAAGAATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGACCCCTCTCTGA 517327 |||| ||| | || || || | |||||| |||||||||||||| ||||| ||||| | Sbjct 1529568 TTAATAATCGCGTTTGCGTCTACATCAAAGGTGACTTCAATTTGTGGGACTCCTCTAGGT 1529509 Query 517328 GCAGGTGGGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATCTTTAGTGAATTTT 517387 ||||| || || || | |||| |||| ||| | | ||||| || | | || | Sbjct 1529508 GCAGGGGGAATTCCCACTAAATCGAATGATCCTAACATTTTATTGTCGCACGCCATTTCT 1529449 Query 517388 CGTTCACCCTCGAAAATTTGGATAGTAACTACAGTTTGATTATCTGAATAAGTTGTAAAT 517447 | ||| || | ||| | || |||| | || ||||| || || | || | |||| Sbjct 1529448 CTTTCTCCTTGGAATACTTTGATACTCACCTGTGTTTGGTTGTCAGCTGCGGTGGAAAAT 1529389 Query 517448 ACTCTG-GATTTTTTACAAGGAATTGTTGTGTTTCTATCAATAATATTGGTCATAATACC 517506 | |||| || || || || || || |||||||| | || | ||||| | | || Sbjct 1529388 A-TCTGCGACTTCTTCGTCGGGATAGTGGTGTTTCTGTTGATCAATTTGGTGAAGACTCC 1529330 Query 517507 ACCTGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGACAATATTTTGAAG 517566 |||| ||||||| ||||||||| || ||| | ||||| | ||| | | || || Sbjct 1529329 ACCTAGGGTTTCTATACCAAGAGATAGGGGAATTACATCTAGTAGAAGCAAATCTT---- 1529274 Query 517567 TTTTTCATCAGTTTGACCAACAAGAATAGCTGCTTGAATAGCAGCACCATATGCAACAGC 517626 || || || ||| || | || | || ||||| ||||| | ||||| || Sbjct 1529273 TTATTTCTCCTTTT--------AGTACTCCTCCCTGGATAGCTGCACCTAACGCAACTGC 1529222 Query 517627 TTCATCAGGATTAACA 517642 ||||||||| || ||| Sbjct 1529221 TTCATCAGGGTTGACA 1529206 Score = 93.3 bits (102), Expect = 3e-13 Identities = 105/141 (74%), Gaps = 0/141 (0%) Strand=Plus/Minus Query 322236 TTCCTAAACCGTATGCAAGAGCTGCTGCAGTTGGTTCATTAATTATTTTAAGAACATCTA 322295 || |||| || |||| | ||| ||||| ||||| || ||||| ||| ||| ||||| | Sbjct 1528676 TTTCTAACCCAAATGCTAAAGCCGCTGCGGTTGGCTCGTTAATAATTCGAAGCACATCCA 1528617 Query 322296 AACCCGCAATTTTAGCAGAATCAAGAGTTGCTTGTCTCTGTGCGTCATTAAAATATGCTG 322355 |||| |||||||| | | || || ||||| || |||| ||||||||||| || | Sbjct 1528616 AACCTGCAATTTTTCCTGCGTCCTTCGTGGCTTGCCTTTGTGAATCATTAAAATAAGCAG 1528557 Query 322356 GTACAGTAATAACTGCTTTAT 322376 |||| || ||||| |||| || Sbjct 1528556 GTACTGTGATAACAGCTTGAT 1528536 >seq6 Length=3498471 Score = 96.9 bits (106), Expect = 3e-14 Identities = 134/185 (72%), Gaps = 11/185 (6%) Strand=Plus/Minus Query 870794 AAAATTATTG-TCGATTATTCTTCTCCAAATATTGCTAAAGAAATGCATATTGGACATTT 870852 |||| | ||| |||||| ||||| ||||||||||| |||||||||||| |||||||||| Sbjct 1934758 AAAAGTGTTGGTCGATTTCTCTTCCCCAAATATTGCCAAAGAAATGCATGTTGGACATTT 1934699 Query 870853 AAGATCAACTATTATTGGTGAATCTATTTGTAGGGTATTAGAA-----ATGTGTGGACAC 870907 ||||||||| || | || || || |||| | || ||| | |||||| || Sbjct 1934698 AAGATCAACCATATTAGGAGACAGCATATGTAAAATTTTCGAATTCCTAAATGTGGAAAC 1934639 Query 870908 GATGTTTATCGTATTAATCATGTGGGTGATTGGGGAACTCAATTCGGTATGTTAATTGCT 870967 | ||| ||| |||||| | ||||| ||||| || ||||| || ||| | || | Sbjct 1934638 ---GGTTAGGGTA--AATCATATTGGTGACTGGGGTACACAATTTGGAATGATCATAAAT 1934584 Query 870968 TATAT 870972 ||||| Sbjct 1934583 TATAT 1934579 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3780814559519548