Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmodium_20coatneyi_20[genbank_20GCA_5F000725905.1_202014-07-21] 158 sequences; 27,817,468 total letters Query= NC_014765.1 Length=198519 Score E Sequences producing significant alignments: (Bits) Value seq10 405 7e-108 seq12 170 2e-37 seq5 131 2e-25 seq14 96.9 4e-15 >seq10 Length=1594295 Score = 405 bits (448), Expect = 7e-108 Identities = 1064/1600 (67%), Gaps = 38/1600 (2%) Strand=Plus/Plus Query 6568 TTCATCTTCATCTTTATACTTTTCCGCATCTTGGACCATCTTTTCAATGTCTTCTTTCGA 6627 ||||||||| |||| |||||||| || || | ||||| ||||| |||||| || Sbjct 564382 TTCATCTTCTGCTTTGTACTTTTCAGCGTCGTTCACCATACGGTCAATTTCTTCTGGGGA 564441 Query 6628 TAATCTCCCCTTATCATTCGTAATCGTAATCTT-TTCGGATTTACCCGAGGCCTTATCTT 6686 ||||| ||||| ||||| ||||| ||||| | ||| | ||| |||| || || || Sbjct 564442 CAATCTTCCCTTGTCATTGGTAATGGTAATATGGTTCTGTTTT-CCCGTGGATTTTTCAA 564500 Query 6687 CAGCACTTACATTCAAAATACCATTTGCATCAACATCGAACCTTACATTAATTTGTGGTG 6746 ||||| | ||||| | |||||||| ||||||| ||| || | || | ||||||||| Sbjct 564501 CAGCAGTAACATTAAGGATACCATTAGCATCAATATCAAAGGTAACTTCAATTTGTGGGA 564560 Query 6747 TACCCCTCGGTGCGGCTGGAATACCCGTTAAATCAAATGTACCAAGTAAACTGTTATCCG 6806 |||||||| | ||| ||||| || | |||| |||| | || |||| ||| Sbjct 564561 CTTTTCTCGGTGCTGGTGGGATACCGTCTAGGTGAAATTTACCCAACAAGTTGTTGTCCT 564620 Query 6807 TCGCCTT----CTTACGTTCACCTTCATAGACTTTAATTGTCACCGCAGGTTGATTATCT 6862 | | || || | || ||||| || |||| || ||| | ||||| ||||| Sbjct 564621 TAG--TTAGGGCTCTC--TCTCCTTCGTACACTTGGATCAACACTCCTGGTTGGTTATCA 564676 Query 6863 TGTGCCGTTGAGAAGATTTGTTCTTTCTTAGATGGAATCGTCGTATTTCTCGGAATAACC 6922 || | ||||||||| ||||| | ||| || || ||||||||| ||| | | Sbjct 564677 GCATAGGTAGTGAAGATTTGACTCTTCTTTGCTGGGATGGTGGTATTTCTCTCAATCAGC 564736 Query 6923 GGGGTCATAATACCACCCATAGTTTCGAGTCCAAGAGACAGAGGTGTCACGTCCAAGAGT 6982 |||||||| || || ||||| | || || || | | ||| || ||||| Sbjct 564737 TTGGTCATAACTCCTCCTGCGGTTTCCAAACCGAGGGATAAGGAACACACATCTAAGAGC 564796 Query 6983 AACAGGTCTTGAACAG-ATTCGTTCCCTTCACCCGTTAAGATGGCGGCTTGGACCGTCGC 7041 |||| ||||| || | ||| | | | |||| | || ||||| ||||| || | || Sbjct 564797 AACAAATCTTGTACCGCATTGGATTGGT-CACCAGACAAAATGGCTGCTTGTACTGCTGC 564855 Query 7042 CCCGTATGCGACCGCCTCATCGGGGTTAATCGTTTTATTCAG--TTCTTTACCGTTAAAA 7099 || || || || || ||||| ||||| || | | | ||| ||| || |||||||| Sbjct 564856 ACCATACGCAACGGCTTCATCAGGGTTGATGGATCTG--CAGGCTTCCTTTCCGTTAAAG 564913 Query 7100 TAATCCGATAACATTTGTTGAATTTTCGGGATTCGTGTCGATCCACCGACCAAAACGATT 7159 | ||| | | | ||||||||| || |||| ||| || ||||| || | || | | Sbjct 564914 AACTCCTTAATGAGTGTTTGAATTTTGGGAATTCTTGTGGAACCACCAACAAGGACAACT 564973 Query 7160 TCATTCACTTTCGATTTATCGATCTTTGAGTCTCGAAGTGTTTTTTCGACAGG---TTCC 7216 || | ||| || || || ||| | | ||| | | || || ||||| | | Sbjct 564974 TCGTGCACGCTCTTCTTGTCCATCATGGCATCTTTCAATACCTTCTCAACAGGAATTAGC 565033 Query 7217 ATACATTTACGGAACAAGTCCATACACAGTTCCTCAAAACGTGCACGGGTAATGGATGTA 7276 || | |||||| | || ||||| ||||||||||| | || | | | | | Sbjct 565034 GTA---TCACGGAAGTAATCGATACAGAGTTCCTCAAATCTGGCTCTACTCACCGTCACA 565090 Query 7277 TAGAAATCAACGCCGTCGTATAACGAATCAATTTCAATGGTTGTTTGTGCCGTCGAAGAT 7336 | | || | || ||| | | || |||||||| ||||| | ||||| | || ||| Sbjct 565091 CTGTAGTCGATACCTTCGAAAAGGGAGTCAATTTCGATGGTGGCTTGTGTAGAGGAGGAT 565150 Query 7337 AACGTTCGCTTTGCGCGCTCACACGCCGTTCGTAAACGACGAAGGGCACGCGGGTTACCG 7396 || || ||||| || | |||||| |||||||| | | | ||| | || Sbjct 565151 AAGGTACGCTTGGCTCTCTCACATTGAGTTCGTAATCTTCTTAAGGCTCTGCTATTCTTA 565210 Query 7397 GAAATATCTTT--CT-TATGTTTACGTTTAAACTCTTCAG---AGAAGTGTCGAAGGAGT 7450 || | ||| || || ||| ||| | |||||| |||||| | |||| || | | Sbjct 565211 GATAAATCCTTTCCTCTATTTTTTCTTTTAAAATCTTCAACACAAAAGT-TC--ACCAAC 565267 Query 7451 CTCGAATCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAG 7510 || || ||||||||||| || ||||| ||||| || || || || || ||||| || Sbjct 565268 CTGTTGTCAAAATCTTCACCTCCTAAGTGCGTATCTCCAGCTGTGGCCTTCACTTCGAAA 565327 Query 7511 ATACCTCCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATG 7570 || || | ||||| ||| | || ||||| || || || || || ||||| |||||| Sbjct 565328 ATTCCATCCTCAATCGTTAGGAGGGATACATCGAAAGTTCCTCCTCCGAGGTCGAAAATG 565387 Query 7571 AGTACGTTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTT 7630 || | |||| | || | | | || || | ||||| || || ||||| || || ||| Sbjct 565388 AGGATGTTCTTTTCACCCTTTCCTTTTTTGTGCAGACCATAAGCAATAGCAGCTGCAGTT 565447 Query 7631 GGTTCATTAATAATAC-GAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGC 7689 || || || ||||| | | |||| |||| ||||||||||| | || || ||||| || Sbjct 565448 GGCTCGTTGATAATTCTCATGACA-TTCAAACCAGCAATAGTACCTGCGTCCTTCGTGGC 565506 Query 7690 TTGTCGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTT 7749 ||| | ||| ||||| ||||| || || || || || | ||| || | | | ||| Sbjct 565507 TTGCCTTTGTGAATCATTAAAATAAGCTGGCACGGTAATGACTGCATTTTTTATGGACTT 565566 Query 7750 ACCGAGATACGATTCCGCGATATCTTTCAT-TTTGGTAAGAACCATCGATGAAATCTCTT 7808 || | | ||| ||| || | |||||||| ||| | || |||||| || || || |||| Sbjct 565567 TCCTAAAAACGCTTCTGCATTTTCTTTCATCTTTTGCAA-AACCATGGAAGAGATTTCTT 565625 Query 7809 CAGCCGCAAACTGTTTCGTTTCACCGTTAAAATCAACTTCAATCATGGGTTTATCCGCAG 7868 ||| || |||| | || || | | | || ||||||||||| || || || Sbjct 565626 CAGGGTGGAATAATTTCTTCTCTCCCTGATAGGATACCTCAATCATGGGCTTCTCATCAA 565685 Query 7869 CACCGGGGATAACCTTATACGACCAATCTTTCATATCGTCTTGGACCTGTTGGTCCGAAA 7928 |||||| | || || | | ||| | |||||||||| || || || | | Sbjct 565686 CACCGGACTTGACAGTAAATGGCCAGTGTTTCATATCGCTCTGCACAGAAGATTCAGTGA 565745 Query 7929 ACTTTCTTCCGATAAGACGCTTTGCATCAAAAACTGTGTTTTTGGGGTTCATGGCTGTTT 7988 |||| ||||| || | | ||||||||||||||| ||||| | |||||| | || || Sbjct 565746 ACTTCCTTCCAATTAACCTCTTTGCATCAAAAACAGTGTTCTCTGGGTTCCTTGCCACTT 565805 Query 7989 GGTTCTTCGCCGCGTCCCCGATAAGACGTTCATTATTTTCCGTAAACGCGACGTACGATG 8048 ||||||| || || || || || || | || | | || || || || ||||| |||| Sbjct 565806 GGTTCTTAGCGGCATCTCCAATTAGCC--TC-TCCGTGTCAGTGAAGGCAACGTAAGATG 565862 Query 8049 GGGTCGTTCGATTCCCTTGGTCGTTCGCAATAATTTCTACGCGGTCGTTTTGCCAGACGC 8108 | || |||| || || ||||| || ||||| || ||||| |||||| ||| || | Sbjct 565863 GAGTGGTTCTGTTTCCCTGGTCATTGGCAATGATATCTACATTTTCGTTTCTCCATACTC 565922 Query 8109 CGACGCACGAATACGTTGTTCCTAAATCAATACCGATTGC 8148 ||||||| ||||| || || || | ||||||||||| || Sbjct 565923 CGACGCAGGAATAGGTGGTACCAAGGTCAATACCGATGGC 565962 >seq12 Length=1585989 Score = 170 bits (188), Expect = 2e-37 Identities = 420/630 (67%), Gaps = 19/630 (3%) Strand=Plus/Minus Query 6539 TTCTTCGCCTCGACCTTTTTCGCGTACTTT-TCATCTTCATCTTTATACTTTTCCGCATC 6597 || ||||| || || |||||| |||| || | ||| ||||| | | ||||| ||||| Sbjct 745934 TTTTTCGCTTCTAC-TTTTTCTCGTAGATTCTTATCCTCATCGGCAAATTTTTCTGCATC 745876 Query 6598 TTGGACCATCTTTTCAATGTCTTCTTTCGATAATCTCCCCTTATCATTCGTAATCGTAAT 6657 | | ||| ||||| || | |||||| || | ||| || |||||||| ||||| ||||| Sbjct 745875 GTTAATCATTTTTTCGATTTGTTCTTTGGACAGTCTTCCTTTATCATTGGTAATTGTAAT 745816 Query 6658 --CTTTTCGGATTTACCCGAGGCCTTATCTTCAGCACTTACATTCAAAATACCATTTGCA 6715 | || | ||| || | | |||||||| || ||| | | ||||||||| | Sbjct 745815 TCCCTTACT--TTTTCCTGTACCTTTATCTTCCGCTTCTACGTGGAGGATACCATTTTTA 745758 Query 6716 TCAACATCGAACCTTACATTAATTTGTGGTGTACCCCTCGGTGCGGCTGGAATACCCGTT 6775 || || ||| | || | ||||| || ||| ||| |||| | ||| || || | Sbjct 745757 TCTACTGTGAAGGTCACTTCAATTTTGGGGACACCTCTCTGTGCTGGTGGGATTCCTGAA 745698 Query 6776 AAATCAAATGTACCAAGTAAACTGTTATCCGTCGCC--TTCTTACGTTCACCTTCATAGA 6833 | || ||| | || | | ||||||| | | | || | |||||||||| | | Sbjct 745697 AGTTCGAATTTTCCTAAAAGGTGGTTATCCTTGGTTAATGCT--CTTTCACCTTCAAAAA 745640 Query 6834 CTTTAATTGTCACCGCAGGTTGATTATCTTGTGCCGTTGAGAAGATTTGTTCTTTCTTAG 6893 ||| ||| ||| || ||||| || ||||| || || ||| | ||| ||||| | Sbjct 745639 CTTGGATTAACACAGCTGGTTGGTTGTCTTGGTAGGTAGAAAAGGTCTGTGACTTCTTCG 745580 Query 6894 ATGGAATCGTCGTATTTCTCGGAATAACCGGGGTCATAATACCACCCATAGTTTCGAGTC 6953 |||||| |||||||| ||| | ||||||| ||||| || | ||||| | | Sbjct 745579 TTGGAATAACTGTATTTCTTTTAATCAGTTGGGTCATGATACCTCCAACGGTTTCTATAC 745520 Query 6954 CAAGAGACAGAGGTGTCACGTCCAAGAGTAACAGGTCTTGAACAGATTCGTTCCCTTCAC 7013 | | | || || || || || | || | || ||||| | |||| ||| | Sbjct 745519 CTAAGGTTAGTGGAGTAACATCTAGCAGAACCACATCTTGCA---ATTC------TTCTC 745469 Query 7014 CCGTTAAGATGGCGGCTTGGACCGTCGCCCCGTATGCGACCGCCTCATCGGGGTTAATCG 7073 || | || | || || | | || |||||||| || || ||||| |||||||| Sbjct 745468 CCAAAATAATTCCCGCCTGAATGGCAGCACCGTATGCTACTGCTTCATCTGGGTTAATAC 745409 Query 7074 TTTTATTCAGTTCTTTACCGTTAAAATAATCCGATAACATTTGTTGAATTTTCGGGATTC 7133 | |||| ||||||||||||| ||| | || || |||||||||||||| ||||| | Sbjct 745408 CTCTATTTGGTTCTTTACCGTTGAAAAATTCTTTTATAATTTGTTGAATTTTGGGGATAC 745349 Query 7134 GTGTCGATCCACCGACCAAAACGATTTCAT 7163 | || ||||| || || | ||||||||||| Sbjct 745348 GAGTAGATCCTCCTACTAGAACGATTTCAT 745319 Score = 118 bits (130), Expect = 1e-21 Identities = 147/200 (74%), Gaps = 1/200 (1%) Strand=Plus/Minus Query 7583 TCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATA 7642 ||||| |||| ||||| || | |||||| || | ||| || || ||||||||||| ||| Sbjct 744904 TCGTC-TCTTCCTTCTTGTCCAAACCGTAAGCCAAAGCTGCTGCAGTTGGTTCATTTATA 744846 Query 7643 ATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAA 7702 ||||||| | ||| | || ||||| ||| | || || || || ||||||| || | | Sbjct 744845 ATACGAACAATGTTTAAACCTGCAATGGTTCCTGCGTCCTTTGTTGCTTGTCTCTGTGCA 744786 Query 7703 TCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGATACGAT 7762 || || |||||||| || || ||||| || |||| | ||| ||| || | | | ||| Sbjct 744785 TCATTGAAGTAGGCTGGTACTGTTACAACTGCGTTTTTAACTGGCTTTCCCAAAAAGGAT 744726 Query 7763 TCCGCGATATCTTTCATTTT 7782 | || || ||||||||||| Sbjct 744725 TGAGCTATTTCTTTCATTTT 744706 >seq5 Length=2463301 Score = 131 bits (144), Expect = 2e-25 Identities = 957/1528 (63%), Gaps = 49/1528 (3%) Strand=Plus/Minus Query 104485 CCTCTATCCGCCGCCATATCGATGATTGTTTTTTGACTCATTTCCCATACGGTTTTATAC 104544 |||| || ||||||||||| ||||| | || || | || ||||| ||||||||||| Sbjct 676230 CCTCGGTCGGCCGCCATATCAATGATGTTCTTCTGCTTGATCTCCCAAACGGTTTTATAG 676171 Query 104545 AATTCCTTAAGATCATCGGGTATATCAATAATGTTTTGAACAGACCCATTTGCCTTCACC 104604 | ||||| | || | || || || |||| | ||| ||| || || | | Sbjct 676170 AGCTCCTTCAAGTCGTTAGGAATTTCGCTAATATATTGGACACTTCCGTTG---TGGGCA 676114 Query 104605 ATAAGAT-CT--TTCATTTCCTTCGACCAGAGTCCACGTTCTTTCAAATCGTTTACTAAA 104661 || || | || ||||| |||| |||||| ||||| || | || || | | Sbjct 676113 ATGAGCTGCTGCTTCATGTCCTCATCCCAGAGACCACGATCGAAGAGGTCCTTCAACAGG 676054 Query 104662 TGTTTGTTTACGACGACAAATTCACCCGCGAGTGTTCGTCTCAAATAGATATTGGTCGTA 104721 ||| ||| || |||| || || || || | || | || || || |||| Sbjct 676053 TGTGGGTTCACTACGAAGAACTCTCCACTCAGAACCCTCCTGTAGTAAATGTTACTCGTG 675994 Query 104722 TACGGTTCGAAACACTCGTTGTTCCCTAAAATCTGGGATGTGGATGCGGTAGGCATAGGT 104781 |||||||| ||| |||||||||| || | ||| || || || || || |||||||||||| Sbjct 675993 TACGGTTCAAAAGACTCGTTGTTGCCAAGAATTTGTGACGTCGAAGCAGTAGGCATAGGT 675934 Query 104782 GCAAGAAGAAGACTATT-CATAGTTCCT--TTCTTAACAAGTTTACGCATGGCATT---- 104834 || || || || ||| | || | | ||||| | | | ||| | ||| Sbjct 675933 GCCAGCAGGAGCGAATTTCTTAACCCGTGCTTCTTTATA----TTCGCCTTCAATTTATC 675878 Query 104835 CCAATCGTATCGACCACTAAACTTTGG-GTC----TCGA--TCCCACATATCGAATTGAA 104887 |||||| ||| || |||| ||| | || | |||||| ||||| |||| Sbjct 675877 CCAATC-------CCAATA---TTTGTTGTCCACCTTGACATTCCACATGTCGAACTGAA 675828 Query 104888 GAATACCTTTACTAAACGGTGACCCCTTAAACGTTTCATAAGGACCGTACATTTCGGCAA 104947 |||| |||| ||| || |||| | || |||||||| ||||||| || || | Sbjct 675827 GAATTCCTTGGCTAGCTGGACTACCCTGGTAGGTCTCATAAGGTCCGTACACTTGTGCCA 675768 Query 104948 GTTCACACGACGATTCGAGTGATGCGTGGTAGATAGTTTCGAATATATCAATGTTGAGTT 105007 ||| ||| || | | || | || || |||||||| || | || | || Sbjct 675767 ATTCCATGGACATCTCCAAAGCAGCATAATACATTGTTTCGAAAATTCTTTTATTTAATT 675708 Query 105008 TTCTCGATTCTTCTGAACCGAATGTCATTCTTAACATGATAAACACGTCAGCGAGACCCT 105067 ||| || || | ||| ||| | | || || ||| || | || | Sbjct 675707 CCTTCGCAGAATCGGATTCATATGGGTATCTAAGAAGCATGAAGGTGTCTGCCAAGCCTT 675648 Query 105068 GAACACCAATACCGATGGGTCTGTGACGCATATTTGAACGTTTCCCGTTTTCGGTTGGGT 105127 | || || || || ||||||||||| | | | || || |||| | | | |||| Sbjct 675647 GTACTCCTATCCCTATGGGTCTGTGTCTCTTGTTGGATCGTTCAGCCTCCTGCACAGGGT 675588 Query 105128 AAAAGTTTTTATCAATAACCTTGTTTAAGTTACGTGTAACCATTTTCGTAACACGATGTA 105187 | | || | || |||| | || ||||||||||||| ||||| |||| | | Sbjct 675587 AGTAATTCCTCTCTATAATTTGGTCCAAGTTACGTGTAATAATTTTGGTAATTTCGTACA 675528 Query 105188 ACTCTTCATGGTTAAACTCGTTCTTCTCGACATCAACGTATTTTGGTAACGCGATTGATG 105247 | | | || || || || || || || || |||| |||||||| || | Sbjct 675527 GTTTCTTAAAATTGAATTCTCCTTTTTCCACGTCGACAAATTTGCACAACGCGATGGAGG 675468 Query 105248 CGAGATTACATACGGCGGTTTCTTCCTTATCCGTAAACTCCAGAATTTCTGTACACAAAT 105307 | | |||||||||||| ||| || ||| |||| | ||| || ||| | | Sbjct 675467 CCAAATTACATACGGCCACTTCGTCTGGGGAAGTATACTCAATAATCTCACAACAGAGGT 675408 Query 105308 TTGATGATTTAATCGTACCAACGTGTTTATGGTTCGACTTTTCATTACACGCGTCTTTGT 105367 | |||| ||||| || | || || ||||| ||||| | ||||| | ||||| | Sbjct 675407 TACTACATTTTATCGTCCCCAAGTTCTTTTGGTTGGACTTCGCGTTACAAGAATCTTTAT 675348 Query 105368 AAAGCATATATGGGGTTCCCGTTTCACTTTGGGATTTAATAATTGCTTTCCAAATCTCCG 105427 | | ||| || || |||||||| | || || | ||| || ||| | || Sbjct 675347 ACAACATGTAGGGAACACCCGTTTCTATCTGACTTTGCAAAATGGCAAACCATAGATCTT 675288 Query 105428 AAGCTGGTACAACTTTAGTTGCGATACCTTCAGATTCGTATTTCTCGTAAAGATCTTCAA 105487 || | ||| ||| | | |||||||| || ||||| ||| || | ||| | Sbjct 675287 GCGCCAGGACAGTTTTTTTGCCCATACCTTCTTCCTCATATTTTAAGTATAGCTTTTCGA 675228 Query 105488 ACTCTTTACCGTACACGTCTGAAAGACCCTTTGCC--TGATCAGGACAAAACAATGACCA 105545 | || | ||| || | || | | || | | | | || || || | ||| | ||| Sbjct 675227 ATTCCTCACCC--CAAGACTCACTTAACCCTGGACATTCATTCGGGCACATCAAAGTCCA 675170 Query 105546 ATTACCATCGGATTCAACGCGTTTCATGAACAAATCTGGAATCCACATGGCTGAAAAGAG 105605 ||| || || || | |||||||| | || || | ||| | || | || || Sbjct 675169 ATTCTGATTTTCTTTTACTCTCTTCATGAAAAGGTCAGGGACCCATACAGCATAGAAAAG 675110 Query 105606 GTCTCGA-CACCTCG--CCTCTTCATCACCTTGATTCAAACGAATTTCGAGAAAATCGAG 105662 ||||| | | | | | |||||| || || ||||| ||||| || ||||| |||| Sbjct 675109 GTCTCTAGCTCTTAGTTCCTCTT--TC-CCGTGATTTTTACGAAGGTCTAGAAATTCGAA 675053 Query 105663 AATATCGGCGTGCCATGGTTCTAAATAGACTGCAATAGA-CCCTTT---ACGACGCCCCG 105718 |||||| | |||||||||||| | || ||||||| || |||||| |||| | Sbjct 675052 AATATCTGAGTGCCATGGTTCGATGTACACTGCAAAGGATCCCTTTCTCTTTCCGCCAC- 674994 Query 105719 CTTGATTGACATATCTTGCGGTTGAGTTATACACTCGTAACATTGGAATAATACCATCGG 105778 |||| | |||||||| || || || |||| | | |||||| | | || | || Sbjct 674993 CTTGGTCTACATATCTAGCTGTATCATTGAACACCCTCAGCATTGGCACTAACCCGTTGG 674934 Query 105779 ATGTTCCATTTGTTCCACGAATATGTGATTTATTTGCACGTACATCGTGAACGTGTAACC 105838 || |||| || ||||| | ||| | || || | | | | | ||| || || || | Sbjct 674933 ATATTCCGTTGGTTCCTCTAATGTAGGAGTTTTGTCCTCTAATATCCTGTACCGCTACTC 674874 Query 105839 CAATACCCCCAGCCCACTTACTGATACGCGCACACTCTTTTACTGTATCGTAAATACCGT 105898 |||| || |||||| || || || | || |||| ||| | || ||| ||||||| | Sbjct 674873 CAATTCCACCAGCCGTTTTGCTAATCAGGGCGCACTGTTTCAGCGTCTCGAAAATACCTT 674814 Query 105899 CGATACTATCTTCCTTATTCGCAATCAGGAAACACGATGACATTTGTGGTCTGGGTGTAC 105958 | || ||| | || | | |||||||| || |||||||| |||||||| || | Sbjct 674813 CAATCGAATCAGCTTTCATACAGAGAAGGAAACAGGACGACATTTGCGGTCTGGGCGTCC 674754 Query 105959 CAGCATTGAACAGAGTTGGTGTTGCATG 105986 ||| |||||||| || |||||||| || Sbjct 674753 CAGAATTGAACAACGTAGGTGTTGCGTG 674726 Score = 113 bits (124), Expect = 6e-20 Identities = 359/545 (66%), Gaps = 14/545 (3%) Strand=Plus/Minus Query 115353 AAATTCTTGGTGCATACCTTCATCTCGACTTATGAGTTCATTACTAAAACATAAACC-TG 115411 ||| ||| ||||| ||||||||||||||| || || || ||||| || | || || Sbjct 2270177 AAAGTCTGTGTGCAGACCTTCATCTCGACTAATTAGCTCGTTACTGAAGGTGAGTCCATG 2270118 Query 115412 GAAGTAACCCTCTCTTTTTTAACCAAAAAATAGCACAAAAACTACCCGAGAAGAATATAC 115471 || | || ||| || ||||||||||||||||| ||||| || || | |||| Sbjct 2270117 CAACTTGTTCTG-CTTCTTAAACCAAAAAATAGCACAGAAACTTCCACTAAATAGGATAC 2270059 Query 115472 CTTCAACACACGCAAAGGCTAATAAACGTTCAGCAAATGG--TCGTTTCTTATCAAACCA 115529 | || ||||| ||| ||||| || | ||| ||||| | | || || | | | ||| Sbjct 2270058 CCTCCACACAGGCATTGGCTACTATCCTTTCTGCAAAGGAGTTGGTATCGTTT--ATCCA 2270001 Query 115530 CTTCATAGCCCATTTCGCCTTTCT-TTCGATACACGGAATTGTTTGAATTGCTTCGAATA 115588 ||| ||||| ||| || | ||| | | ||||| ||| ||| || | ||| | Sbjct 2270000 CTTGGCTGCCCACAACGCTTTGTTCTTCACTGCG-GGAATATTTTCAATCGCGT-GAAAA 2269943 Query 115589 A--TTGTTTCTTTTCG-CTAGAATTTTTTATATACTTGTCTATGAGTTTACTGTACGTTT 115645 | || |||||| | || | | ||||| || |||||||| | || ||||| | Sbjct 2269942 AGGTTCATTCTTTCCTTCTCG--TCCTTTATGTAGTTGTCTATTAACAAGCTATACGTCT 2269885 Query 115646 CACCGTGTACCATTTCATTGTGAGATTGATAGGCATAAAATGATCGAGCCTCCGTAAGTT 115705 | ||| | ||||| | || ||| |||||| |||||||||| || Sbjct 2269884 CTGAGTGGATATTTTCAACAGCAATCTGGAAGGAGTAAAATTTCTTTGCCTCCGTAATTT 2269825 Query 115706 GTATTTCATCTGCAAAATTATTATTTATATTTTCAAAAACTATACCATCAGAACCAGCaa 115765 | | || | ||| || | || |||||| || || || |||||| | || | Sbjct 2269824 GCACTTGGCGTAAAAATTTGCTTGCTAAATTTTCCAACACAATTCCATCACTCGCTGCGA 2269765 Query 115766 aaaaaGCTAAAATATATTTTATAAAATGTTTTTCATTATCACTTAATTCATTCCAATCAT 115825 | ||||| || | || |||||| |||||||||||||| ||| |||||| | |||| | Sbjct 2269764 AGAAAGCCAACACATGTTTTATGAAATGTTTTTCATTTTCATTTAATTTTTCGAAATCTT 2269705 Query 115826 CCATATCTTTGGAAAAGTCTATCTCTTCAGCGGTCCAATTTGACATTTGGGCCTTTTTAT 115885 || ||| | || ||||| || |||||||| ||||| ||| || || ||||| | Sbjct 2269704 TCAAATCGCTAGACAAGTCAATTTCTTCAGCTGTCCAGAAGGACGCTTCCGCTTTTTTGT 2269645 Query 115886 ACAAA 115890 | ||| Sbjct 2269644 AAAAA 2269640 >seq14 Length=2283415 Score = 96.9 bits (106), Expect = 4e-15 Identities = 223/334 (67%), Gaps = 8/334 (2%) Strand=Plus/Minus Query 7450 TCTCGAATCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAA 7509 |||| ||| || ||||| || || || |||| || |||||||| |||||||| Sbjct 1528819 TCTCTGATCAAAGTCTTCTCCTCCTAAAGACGTATTTCCATTTGTCGCTTTCACTTCAAA 1528760 Query 7510 GATACCTCCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAAT 7569 | |||||| ||| | || | ||||| ||||| |||||||| || | ||| ||| Sbjct 1528759 AACACCTCCCAGAATTTCCAAAATGGAAACGTCAAAGGTACCACCTCCTAAATCATAAAC 1528700 Query 7570 GAGTACGTTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGT 7629 | | | | | ||||| |||| || | || | || | |||||| || || Sbjct 1528699 GGCAATGACCTTCCCGTCGC------TCTTTTCTAACCCAAATGCTAAAGCCGCTGCGGT 1528646 Query 7630 TGGTTCATTAATAATACGAAG-ACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCG 7688 ||| || |||||||| ||||| ||| | || || ||||| || | || || ||||| | Sbjct 1528645 TGGCTCGTTAATAATTCGAAGCACA-TCCAAACCTGCAATTTTTCCTGCGTCCTTCGTGG 1528587 Query 7689 CTTGTCGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCT 7748 |||| | ||| ||||| ||||| || || || || || | || || | |||||| Sbjct 1528586 CTTGCCTTTGTGAATCATTAAAATAAGCAGGTACTGTGATAACAGCTTGATGTACTTTCC 1528527 Query 7749 TACCGAGATACGATTCCGCGATATCTTTCATTTT 7782 | || | ||| || || | ||||||||||| Sbjct 1528526 TTCCCAAATAATTCTCAGCTGTTTCTTTCATTTT 1528493 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 635131545612720